Jatropha Genome Database

JcCB0365731.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0365731.10 + phase: 0 /partial
         (53 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G62040.1 | Symbols: ATG8C | ATG8C (autophagy 8c); microtubule...    94   2e-20
AT2G05630.1 | Symbols: ATG8D | autophagy 8d (APG8d) | chr2:20832...    88   1e-18
AT4G21980.2 | Symbols: APG8A, ATG8A | APG8A (AUTOPHAGY 8A); APG8...    81   1e-16
AT4G16520.2 | Symbols: ATG8F | ATG8F (autophagy 8f); microtubule...    81   1e-16
AT4G16520.1 | Symbols: ATG8F | ATG8F (autophagy 8f); microtubule...    81   1e-16
AT4G21980.1 | Symbols: APG8A, ATG8A | APG8A (AUTOPHAGY 8A); APG8...    80   4e-16
AT4G04620.2 | Symbols: ATG8B | ATG8B (autophagy 8b); microtubule...    73   4e-14
AT4G04620.1 | Symbols: ATG8B | ATG8B (autophagy 8b); microtubule...    73   4e-14
AT3G60640.1 | Symbols: ATG8G | ATG8G (AUTOPHAGY 8G); microtubule...    72   1e-13
AT2G05630.2 | Symbols: ATG8D | autophagy 8d (APG8d) | chr2:20832...    70   3e-13
AT2G45170.2 | Symbols: ATATG8E | AtATG8e; microtubule binding | ...    69   4e-13
AT2G45170.1 | Symbols: ATATG8E, ATG8E | AtATG8e; microtubule bin...    69   4e-13
AT3G15580.1 | Symbols: ATG8I, APG8H | APG8H (AUTOPHAGY 8H); APG8...    49   6e-07
AT3G06420.1 | Symbols: ATG8H | ATG8H (autophagy 8h); microtubule...    47   3e-06

>AT1G62040.1 | Symbols: ATG8C | ATG8C (autophagy 8c); microtubule
          binding | chr1:22933216-22934253 FORWARD
          Length = 119

 Score = 93.6 bits (231), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 44/49 (89%), Positives = 47/49 (95%)

Query: 4  MANSSFKFEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKKK 52
          MANSSFK EHPLERRQ ES+RIREKYPDRIPVIVERAERSD+P+IDKKK
Sbjct: 1  MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKK 49


>AT2G05630.1 | Symbols: ATG8D | autophagy 8d (APG8d) |
          chr2:2083211-2084775 REVERSE
          Length = 120

 Score = 87.8 bits (216), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/49 (85%), Positives = 47/49 (95%)

Query: 4  MANSSFKFEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKKK 52
          MA SSFK EHPLE+RQAE+ARIREKYPDRIPVIVERAE+SD+PDID+KK
Sbjct: 1  MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKK 49


>AT4G21980.2 | Symbols: APG8A, ATG8A | APG8A (AUTOPHAGY 8A); APG8
          activating enzyme/ APG8-specific protease/ Atg8 ligase
          | chr4:11655868-11656809 FORWARD
          Length = 137

 Score = 81.3 bits (199), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 38/50 (76%), Positives = 44/50 (88%)

Query: 3  AMANSSFKFEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKKK 52
          AMA SSFK  +PLE R +ES+RIREKYPDRIPVIVE+A +SD+PDIDKKK
Sbjct: 15 AMAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKK 64


>AT4G16520.2 | Symbols: ATG8F | ATG8F (autophagy 8f); microtubule
          binding | chr4:9306882-9308113 REVERSE
          Length = 121

 Score = 80.9 bits (198), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/49 (81%), Positives = 45/49 (91%)

Query: 4  MANSSFKFEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKKK 52
          MA SSFK EH LE+R+AE+ARIREKYPDRIPVIVE+AE+SDIP IDKKK
Sbjct: 1  MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKK 49


>AT4G16520.1 | Symbols: ATG8F | ATG8F (autophagy 8f); microtubule
          binding | chr4:9306882-9308113 REVERSE
          Length = 121

 Score = 80.9 bits (198), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/49 (81%), Positives = 45/49 (91%)

Query: 4  MANSSFKFEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKKK 52
          MA SSFK EH LE+R+AE+ARIREKYPDRIPVIVE+AE+SDIP IDKKK
Sbjct: 1  MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKK 49


>AT4G21980.1 | Symbols: APG8A, ATG8A | APG8A (AUTOPHAGY 8A); APG8
          activating enzyme/ APG8-specific protease/ Atg8 ligase
          | chr4:11655913-11656809 FORWARD
          Length = 122

 Score = 79.7 bits (195), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 37/49 (75%), Positives = 43/49 (87%)

Query: 4  MANSSFKFEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKKK 52
          MA SSFK  +PLE R +ES+RIREKYPDRIPVIVE+A +SD+PDIDKKK
Sbjct: 1  MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKK 49


>AT4G04620.2 | Symbols: ATG8B | ATG8B (autophagy 8b); microtubule
          binding | chr4:2328663-2329926 REVERSE
          Length = 122

 Score = 72.8 bits (177), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 33/49 (67%), Positives = 40/49 (81%)

Query: 4  MANSSFKFEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKKK 52
          M  +SFK  +PLE R AES RIR KYP+R+PVIVE+A +SD+PDIDKKK
Sbjct: 1  MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKK 49


>AT4G04620.1 | Symbols: ATG8B | ATG8B (autophagy 8b); microtubule
          binding | chr4:2328663-2329926 REVERSE
          Length = 122

 Score = 72.8 bits (177), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 33/49 (67%), Positives = 40/49 (81%)

Query: 4  MANSSFKFEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKKK 52
          M  +SFK  +PLE R AES RIR KYP+R+PVIVE+A +SD+PDIDKKK
Sbjct: 1  MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKK 49


>AT3G60640.1 | Symbols: ATG8G | ATG8G (AUTOPHAGY 8G); microtubule
          binding | chr3:22416118-22416971 FORWARD
          Length = 121

 Score = 71.6 bits (174), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/49 (65%), Positives = 43/49 (87%)

Query: 4  MANSSFKFEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKKK 52
          M+N SF+ +H  E+R+AE+ RIREKY DR+PVIVE++E+SDIP+IDKKK
Sbjct: 1  MSNVSFRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKK 49


>AT2G05630.2 | Symbols: ATG8D | autophagy 8d (APG8d) |
          chr2:2083211-2084775 REVERSE
          Length = 164

 Score = 69.7 bits (169), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 32/38 (84%), Positives = 38/38 (100%)

Query: 15 LERRQAESARIREKYPDRIPVIVERAERSDIPDIDKKK 52
          L++RQAE+ARIREKYPDRIPVIVERAE+SD+PDID+KK
Sbjct: 56 LKKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKK 93


>AT2G45170.2 | Symbols: ATATG8E | AtATG8e; microtubule binding |
          chr2:18624545-18625526 FORWARD
          Length = 122

 Score = 69.3 bits (168), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 31/47 (65%), Positives = 41/47 (87%)

Query: 6  NSSFKFEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKKK 52
           S FK ++  E+R+AE+ RIREKYPDRIPVIVE+AE+S++P+IDKKK
Sbjct: 4  GSIFKMDNDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKK 50


>AT2G45170.1 | Symbols: ATATG8E, ATG8E | AtATG8e; microtubule
          binding | chr2:18624545-18625526 FORWARD
          Length = 122

 Score = 69.3 bits (168), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 31/47 (65%), Positives = 41/47 (87%)

Query: 6  NSSFKFEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKKK 52
           S FK ++  E+R+AE+ RIREKYPDRIPVIVE+AE+S++P+IDKKK
Sbjct: 4  GSIFKMDNDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKK 50


>AT3G15580.1 | Symbols: ATG8I, APG8H | APG8H (AUTOPHAGY 8H); APG8
          activating enzyme/ APG8-specific protease/ Atg8 ligase/
          microtubule binding | chr3:5274075-5275000 REVERSE
          Length = 115

 Score = 48.9 bits (115), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 8  SFKFEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKKKL 53
          SFK ++ L+ R AES  I  KYP RIPVI E+  ++D+P I+KKK 
Sbjct: 3  SFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKF 48


>AT3G06420.1 | Symbols: ATG8H | ATG8H (autophagy 8h); microtubule
          binding | chr3:1955219-1956274 REVERSE
          Length = 119

 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 30/45 (66%)

Query: 8  SFKFEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKKK 52
          SFK +   + R  ES  I  KYPDRIPVI+E+   +D+PD++K K
Sbjct: 7  SFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNK 51