Jatropha Genome Database

JcCB0364041.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0364041.10 + phase: 0 /partial
         (155 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G19970.1 | Symbols:  | unknown protein | chr3:6959644-6961367...   199   6e-52
AT2G18245.1 | Symbols:  | unknown protein | chr2:7937353-7939382...   115   1e-26

>AT3G19970.1 | Symbols:  | unknown protein | chr3:6959644-6961367
           FORWARD
          Length = 434

 Score =  199 bits (506), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 94/155 (60%), Positives = 115/155 (74%), Gaps = 3/155 (1%)

Query: 1   VWASGFSAAFLKKNSVATRVHMSSSDVEVFVGGKKFVEPKPAATEAALLVILEKFFEVVL 60
           VWASGFSAAFLKK+SVAT+   SSS       G    +PKPAATE ALL++LEKFF V+L
Sbjct: 282 VWASGFSAAFLKKSSVATKGSASSSYES---NGINISQPKPAATETALLLVLEKFFAVIL 338

Query: 61  NFPXXXXXXXXXXXXXXXXQPTCPQLYIYSTADRVIPAKSVESFIQEQRRAGHEVRACNF 120
           N P                QP+CPQLYIYS+ADRVIP + VESFI EQR+AGHEVRACNF
Sbjct: 339 NLPKVNRRLADVLDTLSTAQPSCPQLYIYSSADRVIPVEQVESFIVEQRKAGHEVRACNF 398

Query: 121 VSSPHVDHFRNDPNLYSTQLSQFLDDYVLACCKHS 155
           +SSPHVDHFR++P LY+ +L+ F++++VL+CC HS
Sbjct: 399 ISSPHVDHFRSNPELYTAELNHFMNNFVLSCCHHS 433


>AT2G18245.1 | Symbols:  | unknown protein | chr2:7937353-7939382
           FORWARD
          Length = 398

 Score =  115 bits (287), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 85/148 (57%), Gaps = 6/148 (4%)

Query: 1   VWASGFSAAFLKKNS--VATRVHMSSSDVEVFVGGKKFVEPKPAATEAALLVILEKFFEV 58
           +WA+GF+AA LKK S  + T  +    + +     KK    +P   E  +L  LEK F +
Sbjct: 245 IWAAGFTAAILKKRSSTITTEPNSPIKEEDASTPQKK----EPLGIENIMLSSLEKLFPI 300

Query: 59  VLNFPXXXXXXXXXXXXXXXXQPTCPQLYIYSTADRVIPAKSVESFIQEQRRAGHEVRAC 118
            LN P                 P CPQLY+YS+ D+V+P+ SVE  I+EQ++ G ++ + 
Sbjct: 301 FLNHPDVNTRLTKIIQKLYENHPPCPQLYLYSSGDKVVPSHSVELRIREQQKIGRKIHSF 360

Query: 119 NFVSSPHVDHFRNDPNLYSTQLSQFLDD 146
           NF SSPHVDH+RN P+LYS+QL  FL +
Sbjct: 361 NFKSSPHVDHYRNFPDLYSSQLQNFLQE 388