Jatropha Genome Database

JcCB0360101.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0360101.10 + phase: 0 /partial
         (62 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G14255.1 | Symbols:  | zinc ion binding | chr2:6036974-604089...    95   8e-21
AT5G20350.1 | Symbols: TIP1 | TIP1 (TIP GROWTH DEFECTIVE 1); S-a...    92   8e-20

>AT2G14255.1 | Symbols:  | zinc ion binding | chr2:6036974-6040892
           FORWARD
          Length = 536

 Score = 95.1 bits (235), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 39/52 (75%), Positives = 44/52 (84%)

Query: 1   IARNITTNELANAIRYGYLRGPDGRFRNPYNHGCRKNCADFIIQGYTDDDEI 52
           IARNITTNEL NA R+ YLRGPDGRF NPYNHG R+NC DF++ GYT DDE+
Sbjct: 479 IARNITTNELWNAKRFSYLRGPDGRFYNPYNHGLRRNCTDFLVHGYTRDDEV 530


>AT5G20350.1 | Symbols: TIP1 | TIP1 (TIP GROWTH DEFECTIVE 1);
           S-acyltransferase/ acyl binding | chr5:6876772-6881102
           FORWARD
          Length = 620

 Score = 91.7 bits (226), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 36/51 (70%), Positives = 46/51 (90%)

Query: 1   IARNITTNELANAIRYGYLRGPDGRFRNPYNHGCRKNCADFIIQGYTDDDE 51
           I+RNITTNE+ANA+RY YLRGP GRFRNPY+ GCR+NC+DF+++GY +D E
Sbjct: 487 ISRNITTNEMANALRYSYLRGPGGRFRNPYDLGCRRNCSDFLVKGYNEDIE 537