Jatropha Genome Database
- JcCB0357801.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0357801.10 - phase: 0
(249 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G01410.1 | Symbols: | harpin-induced family protein / HIN1 f... 207 4e-54
AT3G52470.1 | Symbols: | harpin-induced family protein / HIN1 f... 115 3e-26
AT3G44220.1 | Symbols: | harpin-induced family protein / HIN1 f... 111 5e-25
AT4G09590.1 | Symbols: NHL22 | NHL22 | chr4:6066128-6066763 FORWARD 110 1e-24
AT2G35960.1 | Symbols: NHL12 | NHL12 | chr2:15107150-15107782 FO... 109 2e-24
AT2G35970.1 | Symbols: | harpin-induced family protein / HIN1 f... 107 1e-23
AT3G11660.1 | Symbols: NHL1 | NHL1 | chr3:3679031-3679660 REVERSE 106 1e-23
AT5G53730.1 | Symbols: | harpin-induced family protein / HIN1 f... 103 1e-22
AT5G22200.1 | Symbols: | harpin-induced family protein / HIN1 f... 101 5e-22
AT5G06330.1 | Symbols: | hairpin-responsive protein, putative (... 95 4e-20
AT2G27080.2 | Symbols: | harpin-induced protein-related / HIN1-... 73 2e-13
AT2G27080.1 | Symbols: | harpin-induced protein-related / HIN1-... 73 2e-13
AT5G22870.1 | Symbols: | harpin-induced protein-related / HIN1-... 67 8e-12
AT2G35980.1 | Symbols: YLS9, NHL10, ATNHL10 | YLS9 (YELLOW-LEAF-... 67 1e-11
AT1G61760.1 | Symbols: | harpin-induced protein-related / HIN1-... 66 2e-11
AT3G11650.1 | Symbols: NHL2 | NHL2 | chr3:3676264-3676986 REVERSE 65 3e-11
AT5G06320.1 | Symbols: NHL3 | NHL3 | chr5:1931016-1931711 REVERSE 65 5e-11
AT4G05220.1 | Symbols: | harpin-induced protein-related / HIN1-... 63 1e-10
AT1G17620.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 4e-09
AT2G35460.1 | Symbols: | harpin-induced family protein / HIN1 f... 59 4e-09
AT5G21130.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 1e-07
AT4G26490.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 2e-06
AT5G56050.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 3e-06
>AT4G01410.1 | Symbols: | harpin-induced family protein / HIN1
family protein / harpin-responsive family protein |
chr4:578308-578991 FORWARD
Length = 227
Score = 207 bits (528), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 134/189 (70%)
Query: 61 DPRRTLCTIITVFLLLAGLTILIVWLIYRPYKPQFTVVGAAIYDLNTSSPPFISTSMQFT 120
D RR +C I L++ G+ LI+WL+YRP+KP+ TVVGAAIYDLN ++PP ISTS+QF+
Sbjct: 39 DARRAICGAIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFS 98
Query: 121 LVTRNPNKRVSIIYDKLSAYVSYRDQAITPAIALPPLYHDTKSTVALSPVLGGSKVPVSA 180
++ RNPN+RVSI YDKLS YV+Y+DQ ITP + LPPL KSTV ++PV+GG+ +PVS
Sbjct: 99 VLARNPNRRVSIHYDKLSMYVTYKDQIITPPLPLPPLRLGHKSTVVIAPVMGGNGIPVSP 158
Query: 181 DVANGLVMDESYXXXXXXXXXXXXXXWKAGAIRTGRYGVYVKCDIWVGLKKGLIGQVPLL 240
+VANGL DE+Y WKAGAI+TGRYG Y +CD+W+ GQVPLL
Sbjct: 159 EVANGLKNDEAYGVVLMRVVIFGRLRWKAGAIKTGRYGFYARCDVWLRFNPSSNGQVPLL 218
Query: 241 GSPKCKVDV 249
CKVDV
Sbjct: 219 APSTCKVDV 227
>AT3G52470.1 | Symbols: | harpin-induced family protein / HIN1
family protein / harpin-responsive family protein |
chr3:19450750-19451376 FORWARD
Length = 208
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 6/192 (3%)
Query: 64 RTLCTIITVFLLLAGLTILIVWLIYRPYKPQFTVVGAAIYDLNTSSPPFISTSMQFTLVT 123
R LC I F+++ +TI +VW+I RP KP+F + A +Y N S P ++++ Q T+ +
Sbjct: 17 RKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNLSQPNLLTSNFQVTIAS 76
Query: 124 RNPNKRVSIIYDKLSAYVSYRDQAITPAIALPPLYHDTKSTVALSPVLGGSKVPVSADVA 183
RNPN ++ I YD+L Y +Y +Q IT A+PP Y K SP + G+ VP++ +
Sbjct: 77 RNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVWSPFVYGTAVPIAPYNS 136
Query: 184 NGLVMDESYXXXXXXXXXXXXXXWKAGAIRTGRYGVYVKCDIWVGLKKGLIG------QV 237
L ++ WK + TG+Y ++V+C ++ L G V
Sbjct: 137 VALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAFINLGNKAAGVLVGDNAV 196
Query: 238 PLLGSPKCKVDV 249
+ KC V+V
Sbjct: 197 KYTLANKCSVNV 208
>AT3G44220.1 | Symbols: | harpin-induced family protein / HIN1
family protein / harpin-responsive family protein |
chr3:15928216-15929645 FORWARD
Length = 206
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 3/190 (1%)
Query: 63 RRTLCTIITVFLLLAGLTILIVWLIYRPYKPQFTVVGAAIYDLNTSSPPFISTSMQFTLV 122
R+ + ++ FL + +VW I P+ P+F + A IY N S P ++++++Q TL
Sbjct: 17 RKRIGALVLGFLAAVLFVVFLVWAILHPHGPRFVLQDATIYAFNVSQPNYLTSNLQVTLS 76
Query: 123 TRNPNKRVSIIYDKLSAYVSYRDQAITPAIALPPLYHDTKSTVALSPVLGGSKVPVSADV 182
+RNPN ++ I YD+L Y SYR+Q +T A LP Y SP L G+ VPV+
Sbjct: 77 SRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHLDVTIWSPFLYGTTVPVAPYF 136
Query: 183 ANGLVMDESYXXXXXXXXXXXXXXWKAGAIRTGRYGVYVKCDIWVGLKKGLIGQVPLLG- 241
+ L D + WK G +GRY ++V C ++ L G P +
Sbjct: 137 SPALSQDLTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHVNCPAYITLAGHFSGDGPAVKY 196
Query: 242 --SPKCKVDV 249
+C VDV
Sbjct: 197 QLVQRCAVDV 206
>AT4G09590.1 | Symbols: NHL22 | NHL22 | chr4:6066128-6066763 FORWARD
Length = 211
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%)
Query: 66 LCTIITVFLLLAGLTILIVWLIYRPYKPQFTVVGAAIYDLNTSSPPFISTSMQFTLVTRN 125
+C I F+++ +TI +VW+I +P P+F + +Y N S P +++ Q T+ +RN
Sbjct: 22 ICGAIIGFIIIVLMTIFLVWIILQPKNPEFILQDTTVYAFNLSQPNLLTSKFQITIASRN 81
Query: 126 PNKRVSIIYDKLSAYVSYRDQAITPAIALPPLYHDTKSTVALSPVLGGSKVPVSADVANG 185
N + I YD L AY SYR+Q IT A LPP Y K SP+L G++VP++ A
Sbjct: 82 RNSNIGIYYDHLHAYASYRNQQITLASDLPPTYQRHKEDSVWSPLLYGNQVPIAPFNAVA 141
Query: 186 LVMDESYXXXXXXXXXXXXXXWKAGAIRTGRYGVYVKCDIWVG 228
L +++ WK G + G Y ++V+C ++
Sbjct: 142 LGDEQNSGVFTLTICVDGQVRWKVGTLTIGNYHLHVRCQAFIN 184
>AT2G35960.1 | Symbols: NHL12 | NHL12 | chr2:15107150-15107782
FORWARD
Length = 210
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 6/176 (3%)
Query: 80 TILIVWLIYRPYKPQFTVVGAAIYDLNTSSPPFISTSMQFTLVTRNPNKRVSIIYDKLSA 139
TI +VW+I +P KP+F + A +Y N S P ++++ Q T+ +RN N R+ I YD+L
Sbjct: 35 TIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRNRNSRIGIYYDRLHV 94
Query: 140 YVSYRDQAITPAIALPPLYHDTKSTVALSPVLGGSKVPVSADVANGLVMDESYXXXXXXX 199
Y +YR+Q IT A+PP Y K SP + G+ VP++ A L +++
Sbjct: 95 YATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVALGDEQNRGFVTLII 154
Query: 200 XXXXXXXWKAGAIRTGRYGVYVKCDIWVGLKKGLIG------QVPLLGSPKCKVDV 249
WK G + TG+Y ++V+C ++ L G V + KC V+V
Sbjct: 155 RADGRVRWKVGTLITGKYHLHVRCQAFINLADKAAGVHVGENAVKYMLINKCSVNV 210
>AT2G35970.1 | Symbols: | harpin-induced family protein / HIN1
family protein / harpin-responsive family protein |
chr2:15109007-15109642 FORWARD
Length = 211
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%)
Query: 66 LCTIITVFLLLAGLTILIVWLIYRPYKPQFTVVGAAIYDLNTSSPPFISTSMQFTLVTRN 125
+C I F+++ +TI +V +I +P KP+F + +Y N S P +++ Q T+ +RN
Sbjct: 22 ICGAIIGFIIIVLMTIFLVSIILQPKKPEFILQDTTVYAFNLSQPNLLTSKFQITIASRN 81
Query: 126 PNKRVSIIYDKLSAYVSYRDQAITPAIALPPLYHDTKSTVALSPVLGGSKVPVSADVANG 185
N + I YD L AY SYR+Q IT A LPP Y K SP+L G++VP++ A
Sbjct: 82 RNSNIGIYYDHLHAYASYRNQQITLASDLPPTYQRHKENSVWSPLLYGNQVPIAPFNAVA 141
Query: 186 LVMDESYXXXXXXXXXXXXXXWKAGAIRTGRYGVYVKCDIWVG 228
L +++ WK G + G Y ++V+C ++
Sbjct: 142 LGDEQNSGVFTLTICVDGRVRWKVGTLTIGNYHLHVRCQAFIN 184
>AT3G11660.1 | Symbols: NHL1 | NHL1 | chr3:3679031-3679660 REVERSE
Length = 209
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 37 NCEKETHNHMHMAPASRCTGCTASDPRRTLCTIITVFLLLAGLTILIVWLIYRPYKPQFT 96
+CE H+ + RR +II V L + LTIL++W I +P KP+F
Sbjct: 3 DCENHGHSRRKLI-------------RRIFWSIIFV-LFIIFLTILLIWAILQPSKPRFI 48
Query: 97 VVGAAIYDLNTSSPP--FISTSMQFTLVTRNPNKRVSIIYDKLSAYVSYRDQAITPAIAL 154
+ A +Y N S P ++++ Q TL +RNPN ++ I YD+L Y +YR Q IT ++
Sbjct: 49 LQDATVYAFNVSGNPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSI 108
Query: 155 PPLYHDTKSTVALSPVLGGSKVPVSADVANGLVMDESYXXXXXXXXXXXXXXWKAGAIRT 214
PP Y K SP + G+ VP++ L D+ WK G T
Sbjct: 109 PPTYQGHKDVDIWSPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFIT 168
Query: 215 GRYGVYVKCDIWVGL 229
G+Y ++VKC ++
Sbjct: 169 GKYHLHVKCPAYINF 183
>AT5G53730.1 | Symbols: | harpin-induced family protein / HIN1
family protein / harpin-responsive family protein |
chr5:21808072-21808713 REVERSE
Length = 213
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Query: 79 LTILIVWLIYRPYKPQFTVVGAAIYDLN--TSSPPFISTSMQFTLVTRNPNKRVSIIYDK 136
L I +VWLI P +P+F++ A IY LN TSS +++S+Q TL ++NPNK+V I YDK
Sbjct: 40 LIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDK 99
Query: 137 LSAYVSYRDQAITPAIALPPLYHDTKSTVALSPVLGGSKVPVSADVANGLVMDESYXXXX 196
L Y +YR Q IT +LPP Y + L+ L G+++PV+ + + S
Sbjct: 100 LLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKII 159
Query: 197 XXXXXXXXXXWKAGAIRTGRYGVYVKC 223
WK G +G Y V C
Sbjct: 160 IGMKMDGKLRWKIGTWVSGAYRFNVNC 186
>AT5G22200.1 | Symbols: | harpin-induced family protein / HIN1
family protein / harpin-responsive family protein |
chr5:7355688-7356871 FORWARD
Length = 210
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 84/168 (50%), Gaps = 3/168 (1%)
Query: 85 WLIYRPYKPQFTVVGAAIYDLNTSSPPFISTSMQFTLVTRNPNKRVSIIYDKLSAYVSYR 144
W I P+ P+F + I D N S P F+S+++Q T+ +RNPN ++ I YD+L YV+YR
Sbjct: 43 WAILHPHGPRFVLQDVTINDFNVSQPNFLSSNLQVTVSSRNPNDKIGIFYDRLDIYVTYR 102
Query: 145 DQAITPAIALPPLYHDTKSTVALSPVLGGSKVPVSADVANGLVMDESYXXXXXXXXXXXX 204
+Q +T A LP Y SP L GS VPV+ +++ L D
Sbjct: 103 NQEVTLARLLPSTYQGHLEVTVWSPFLIGSAVPVAPYLSSALNEDLFAGLVLLNIKIDGW 162
Query: 205 XXWKAGAIRTGRYGVYVKCDIWVGLKKGLIGQVPLLG---SPKCKVDV 249
WK G+ +G Y ++V C ++ + L G P + +C VDV
Sbjct: 163 VRWKVGSWVSGSYRLHVNCPAFITVTGKLTGTGPAIKYQLVQRCAVDV 210
>AT5G06330.1 | Symbols: | hairpin-responsive protein, putative
(HIN1) | chr5:1934961-1935584 REVERSE
Length = 207
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 2/155 (1%)
Query: 85 WLIYRPYKPQFTVVGAAIYDLNTSSPP--FISTSMQFTLVTRNPNKRVSIIYDKLSAYVS 142
W I +P KP+F + A +++ N S P ++++ QFTL +RNPN ++ I YD+L Y S
Sbjct: 39 WAILQPSKPRFVLQDATVFNFNVSGNPPNLLTSNFQFTLSSRNPNDKIGIYYDRLDVYAS 98
Query: 143 YRDQAITPAIALPPLYHDTKSTVALSPVLGGSKVPVSADVANGLVMDESYXXXXXXXXXX 202
YR Q IT + Y K SP +GG VPV+ A L D S
Sbjct: 99 YRSQQITLPSPMLTTYQGHKEVNVWSPFVGGYSVPVAPYNAFYLDQDHSSGAIMLMLHLD 158
Query: 203 XXXXWKAGAIRTGRYGVYVKCDIWVGLKKGLIGQV 237
WK G+ TG+Y ++V+C + G +
Sbjct: 159 GRVRWKVGSFITGKYHLHVRCHALINFGSSAAGVI 193
>AT2G27080.2 | Symbols: | harpin-induced protein-related /
HIN1-related / harpin-responsive protein-related |
chr2:11566383-11567165 FORWARD
Length = 260
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 87/176 (49%), Gaps = 9/176 (5%)
Query: 53 RCTGCTASDPRRTLCTIITVFLLLAGLTILIVWLIYRPYKPQFTVVGAAIYDLNTSSPPF 112
RC C+ + + ++LAG++ +++LIYRP P++++ G ++ +N +S
Sbjct: 72 RCCFCS-------FLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSP 124
Query: 113 ISTSMQFTLVTRNPNKRVSIIYDKLSAY-VSYRDQAITPAIALPPLYHDTKSTVALSPVL 171
IS S T+ +RN N ++ + Y+K S+ V Y D I+ + +P Y K+ + VL
Sbjct: 125 ISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGV-MPVFYQPAKNVTVVKLVL 183
Query: 172 GGSKVPVSADVANGLVMDESYXXXXXXXXXXXXXXWKAGAIRTGRYGVYVKCDIWV 227
GSK+ +++ + + + S K G+++T V V CD+ V
Sbjct: 184 SGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTV 239
>AT2G27080.1 | Symbols: | harpin-induced protein-related /
HIN1-related / harpin-responsive protein-related |
chr2:11566383-11567165 FORWARD
Length = 260
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 87/176 (49%), Gaps = 9/176 (5%)
Query: 53 RCTGCTASDPRRTLCTIITVFLLLAGLTILIVWLIYRPYKPQFTVVGAAIYDLNTSSPPF 112
RC C+ + + ++LAG++ +++LIYRP P++++ G ++ +N +S
Sbjct: 72 RCCFCS-------FLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSP 124
Query: 113 ISTSMQFTLVTRNPNKRVSIIYDKLSAY-VSYRDQAITPAIALPPLYHDTKSTVALSPVL 171
IS S T+ +RN N ++ + Y+K S+ V Y D I+ + +P Y K+ + VL
Sbjct: 125 ISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGV-MPVFYQPAKNVTVVKLVL 183
Query: 172 GGSKVPVSADVANGLVMDESYXXXXXXXXXXXXXXWKAGAIRTGRYGVYVKCDIWV 227
GSK+ +++ + + + S K G+++T V V CD+ V
Sbjct: 184 SGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTV 239
>AT5G22870.1 | Symbols: | harpin-induced protein-related /
HIN1-related / harpin-responsive protein-related |
chr5:7647056-7647679 REVERSE
Length = 207
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 3/156 (1%)
Query: 69 IITVFLLLAGLTILIVWLIYRPYKPQFTVVGAAIYDLNTSSPPFISTSMQFTLVTRNPNK 128
+I + +A + LI WL +P K ++TV A++ + N ++ +S + QFT+ + NPN
Sbjct: 32 VILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATFQFTIQSHNPNH 91
Query: 129 RVSIIYDKLSAYVSYRDQAITPAIALPPLYHDTKSTV-ALSPVLGGSKVPVSADVANGLV 187
R+S+ Y + +V ++DQ + P +H + V + L V VS L
Sbjct: 92 RISVYYSSVEIFVKFKDQTLAFDTVEP--FHQPRMNVKQIDETLIAENVAVSKSNGKDLR 149
Query: 188 MDESYXXXXXXXXXXXXXXWKAGAIRTGRYGVYVKC 223
S +K G ++ +KC
Sbjct: 150 SQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKC 185
>AT2G35980.1 | Symbols: YLS9, NHL10, ATNHL10 | YLS9
(YELLOW-LEAF-SPECIFIC GENE 9) | chr2:15110635-15111318
FORWARD
Length = 227
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 7/173 (4%)
Query: 54 CTGCTASDPRRTLCTIITVFLLLAGLTILIVWLIYRPYKPQFTVVGAAIYDLNTSSPP-F 112
C C S +I +++ G+ LI WLI RP +F V A++ + +SP
Sbjct: 33 CGCCLLS----LFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNI 88
Query: 113 ISTSMQFTLVTRNPNKRVSIIYDKLSAYVSYRDQAITPAIALPPLYHDTKSTVALSPVLG 172
+ ++ T+ RNPNKR+ + YD++ A+ Y + + I L P Y K+T L+P
Sbjct: 89 LRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFS-TITLTPFYQGHKNTTVLTPTFQ 147
Query: 173 GSKVPV-SADVANGLVMDESYXXXXXXXXXXXXXXWKAGAIRTGRYGVYVKCD 224
G + + +A + L + +K G ++ R V CD
Sbjct: 148 GQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCD 200
>AT1G61760.1 | Symbols: | harpin-induced protein-related /
HIN1-related / harpin-responsive protein-related |
chr1:22807440-22808114 REVERSE
Length = 224
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 3/166 (1%)
Query: 64 RTLCTIITVFLLLAGLTILIVWLIYRPYKPQFTVVGAAIYDLNTSSPPFISTS-MQFTLV 122
+ +C I LL G+ I+W+ +P++P+ + G +I L S P TS + F +
Sbjct: 42 KLICAIFLSLLLCLGIITFILWISLQPHRPRVHIRGFSISGL--SRPDGFETSHISFKIT 99
Query: 123 TRNPNKRVSIIYDKLSAYVSYRDQAITPAIALPPLYHDTKSTVALSPVLGGSKVPVSADV 182
NPN+ V I YD + V Y+++ I P Y D K+T ++ L + V+ D
Sbjct: 100 AHNPNQNVGIYYDSMEGSVYYKEKRIGSTKLTNPFYQDPKNTSSIDGALSRPAMAVNKDR 159
Query: 183 ANGLVMDESYXXXXXXXXXXXXXXWKAGAIRTGRYGVYVKCDIWVG 228
+ D + +K + + +Y C I +G
Sbjct: 160 WMEMERDRNQGKIMFRLKVRSMIRFKVYTWHSKSHKMYASCYIEIG 205
>AT3G11650.1 | Symbols: NHL2 | NHL2 | chr3:3676264-3676986 REVERSE
Length = 240
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 4/144 (2%)
Query: 48 MAPASRCTGCTASDPRRTLCTIITVFLLLAGLTILIVWLIYRPYKPQFTVVGAAIYDLNT 107
+ RC GC +C I+ ++ G+ LI+WLI+RP +F V A + +
Sbjct: 40 LGSCLRCCGCCI---LSLICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSF 96
Query: 108 SSPPFISTSMQFTLVTRNPNKRVSIIYDKLSAYVSYRDQAITPAIALPPLYHDTKSTVAL 167
+ S+ RNPN+RV + YD+ S Y DQ A + Y K+T +
Sbjct: 97 DPNNNLHYSLDLNFTIRNPNQRVGVYYDEFSVSGYYGDQRFGSA-NVSSFYQGHKNTTVI 155
Query: 168 SPVLGGSKVPVSADVANGLVMDES 191
+ G + V D A + D+
Sbjct: 156 LTKIEGQNLVVLGDGARTDLKDDE 179
>AT5G06320.1 | Symbols: NHL3 | NHL3 | chr5:1931016-1931711 REVERSE
Length = 231
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 10/188 (5%)
Query: 66 LCTIITVFLLLAGLTILIVWLIYRPYKPQFTVVGAAIYDLNTSSPPFISTSMQFTLVTRN 125
+ I+ +L G+ LI+WLI+RP +F V A + + + ++ RN
Sbjct: 48 IFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRN 107
Query: 126 PNKRVSIIYDKLSAYVSYRDQAITPAIALPPLYHDTKSTVALSPVLGGSK-VPVSADVAN 184
PN+R+ + YD++ Y DQ + + Y K+T + L G + V +
Sbjct: 108 PNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERK 167
Query: 185 GLVMDESYXXXXXXXXXXXXXXWKAGAIRTGRYGVYVKCDIWVGL----KKGLIGQVPLL 240
L D + +K G I++ R+ +KCD+ V L G + Q
Sbjct: 168 DLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQ---- 223
Query: 241 GSPKCKVD 248
KC VD
Sbjct: 224 -PTKCDVD 230
>AT4G05220.1 | Symbols: | harpin-induced protein-related /
HIN1-related / harpin-responsive protein-related |
chr4:2685104-2685784 REVERSE
Length = 226
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 85/198 (42%), Gaps = 6/198 (3%)
Query: 51 ASRCTGCTASDPRRTLCTIITVFLLLAGLTILIVWLIYRPYKPQFTVVGAAIYDLNTSSP 110
A R ++ + +C + + L G+ I+WL RP++P+F + + L+ P
Sbjct: 31 AHRVRESLSTRISKFICAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLD--QP 88
Query: 111 PFISTS-MQFTLVTRNPNKRVSIIYDKLSAYVSYRDQAITPAIALPPLYHDTKSTVALSP 169
+ + + F + NPN+ + + +D + + Y+DQ + L P + +T ++
Sbjct: 89 TGVENARIAFNVTILNPNQHMGVYFDSMEGSIYYKDQRVGLIPLLNPFFQQPTNTTIVTG 148
Query: 170 VLGGSKVPVSADVANGLVMDESYXXXXXXXXXXXXXXWKAGAIRTGRYGVYVKCDIWVGL 229
L G+ + V+++ D + +K + + ++ C+I VG
Sbjct: 149 TLTGASLTVNSNRWTEFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCNIVVG- 207
Query: 230 KKGLIGQVPLLGSPKCKV 247
+ GLI +P +C V
Sbjct: 208 RDGLI--LPKFNHKRCPV 223
>AT1G17620.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
plasma membrane; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Harpin-induced 1 (InterPro:IPR010847); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G11890.1); Has 539 Blast hits to 538 proteins
in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr1:6062313-6063107 FORWARD
Length = 264
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 83 IVWLIYRPYKPQFTVVGAAIYDLNTSSPPFISTSMQFTLVTRNPNKRVSIIYDKLS---- 138
+V+LIYRP +P FTV I LN +S ++T++ +++ RNPNK V IYD
Sbjct: 82 VVYLIYRPQRPSFTVSELKISTLNFTSAVRLTTAISLSVIARNPNKNVGFIYDVTDITLY 141
Query: 139 -AYVSYRDQAITPAIALPPLYHDTKSTVALSPVLGGSKVPVSADVANGLVMD-ESYXXXX 196
A D + + H K+T L +G + A L D ++
Sbjct: 142 KASTGGDDDVVIGKGTIAAFSHGKKNTTTLRSTIGSPPDELDEISAGKLKGDLKAKKAVA 201
Query: 197 XXXXXXXXXXWKAGAIRTGRYGVYVKCD 224
K GA++T + G+ V C+
Sbjct: 202 IKIVLNSKVKVKMGALKTPKSGIRVTCE 229
>AT2G35460.1 | Symbols: | harpin-induced family protein / HIN1
family protein / harpin-responsive family protein |
chr2:14905788-14906504 FORWARD
Length = 238
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 10/126 (7%)
Query: 54 CTGCTASDPRRTLCTIITVFLLLAGLTILIVWLIYRPYKPQFTVVGAAI--YDLNTSSPP 111
C GC + +C I+ L+ G+ LI+W I RP +F V A + ++ + S
Sbjct: 46 CGGCLVN----IICNILIGVLVCLGVVALILWFILRPNVVKFQVTEADLTRFEFDPRSHN 101
Query: 112 F-ISTSMQFTLVTRNPNKRVSIIYDKLSAYVSYRDQAITPAIALPPLYHDTKSTVALSPV 170
+ S+ F++ RNPN+R+ I YD+L Y DQ + A + Y K+T +
Sbjct: 102 LHYNISLNFSI--RNPNQRLGIHYDQLEVRGYYGDQRFSAA-NMTSFYQGHKNTTVVGTE 158
Query: 171 LGGSKV 176
L G K+
Sbjct: 159 LNGQKL 164
>AT5G21130.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Harpin-induced 1 (InterPro:IPR010847); BEST Arabidopsis
thaliana protein match is: harpin-induced
protein-related / HIN1-related / harpin-responsive
protein-related (TAIR:AT2G27080.2); Has 592 Blast hits
to 591 proteins in 21 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 592; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr5:7185968-7186813 FORWARD
Length = 281
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 5/169 (2%)
Query: 63 RRTLC---TIITVFLLLAGLTILIVWLIYRPYKPQFTVVGAAIYDLN-TSSPPFISTSMQ 118
RR LC + + + ++LA + +L+Y+P+KPQF+V G ++ +N TSS PF S ++
Sbjct: 93 RRCLCYSLSALLIIIVLAAIAFGFFYLVYQPHKPQFSVSGVSVTGINLTSSSPF-SPVIR 151
Query: 119 FTLVTRNPNKRVSIIYDKLSAYVSYRDQAITPAIALPPLYHDTKSTVALSPVLGGSKVPV 178
L ++N ++ +IY+K + + + + + VL GS V +
Sbjct: 152 IKLRSQNVKGKLGLIYEKGNEADVFFNGTKLGNGEFTAFKQPAGNVTVIVTVLKGSSVKL 211
Query: 179 SADVANGLVMDESYXXXXXXXXXXXXXXWKAGAIRTGRYGVYVKCDIWV 227
+ L + +K G++ T + V C I V
Sbjct: 212 KSSSRKELTESQKKGKVPFGLRIKAPVKFKVGSVTTWTMTITVDCKITV 260
>AT4G26490.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 11 plant
structures; EXPRESSED DURING: 4 anthesis, LP.04 four
leaves visible, F mature embryo stage, petal
differentiation and expansion stage, E expanded
cotyledon stage; CONTAINS InterPro DOMAIN/s:
Harpin-induced 1 (InterPro:IPR010847); BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G56050.1); Has 263 Blast hits to 263 proteins
in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr4:13380425-13381231 FORWARD
Length = 268
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 66 LCTIITVFLLLAGLTILIVWLIYRPYKPQFTVVGAAIYDLNTSSPPFISTSMQFTLVTRN 125
C + ++ L+ + LIV+L RP P F + A ++ + +P F + + + N
Sbjct: 92 FCFVFSLLLIFFAIATLIVFLAIRPRIPVFDIPNANLHTIYFDTPEFFNGDLSMLVNFTN 151
Query: 126 PNKRVSIIYDKLSAYVSYRDQAITPAIALPPLYHDTKSTVALSPV 170
PNK++ + ++KL + + ++ I + P + K L P+
Sbjct: 152 PNKKIEVKFEKLRIELFFFNRLIAAQVVQP--FLQKKHETRLEPI 194
>AT5G56050.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; CONTAINS InterPro DOMAIN/s: Harpin-induced
1 (InterPro:IPR010847); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G26490.1);
Has 322 Blast hits to 322 proteins in 28 species: Archae
- 0; Bacteria - 8; Metazoa - 10; Fungi - 1; Plants -
299; Viruses - 2; Other Eukaryotes - 2 (source: NCBI
BLink). | chr5:22701167-22702018 REVERSE
Length = 283
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%)
Query: 66 LCTIITVFLLLAGLTILIVWLIYRPYKPQFTVVGAAIYDLNTSSPPFISTSMQFTLVTRN 125
LC I ++ L++ G+ LI++L +P P F + A + + SP + + M L N
Sbjct: 106 LCFIFSILLIVFGIATLILYLAVKPRTPVFDISNAKLNTILFESPVYFNGDMLLQLNFTN 165
Query: 126 PNKRVSIIYDKLSAYVSYRDQAITPAIALP 155
PNK++++ ++ L + + D I LP
Sbjct: 166 PNKKLNVRFENLMVELWFADTKIATQGVLP 195