Jatropha Genome Database

JcCB0356581.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0356581.10 - phase: 1 /partial
         (130 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G26830.1 | Symbols: emb1187 | emb1187 (embryo defective 1187)...   205   7e-54
AT1G71697.1 | Symbols: ATCK1, CK | ATCK1 (CHOLINE KINASE 1); cho...    84   3e-17
AT4G09760.1 | Symbols:  | choline kinase, putative | chr4:614895...    83   6e-17
AT4G09760.2 | Symbols:  | choline kinase, putative | chr4:614895...    83   6e-17
AT1G74320.1 | Symbols:  | choline kinase, putative | chr1:279411...    76   5e-15

>AT2G26830.1 | Symbols: emb1187 | emb1187 (embryo defective 1187);
           kinase/ phosphotransferase, alcohol group as acceptor |
           chr2:11443599-11446958 FORWARD
          Length = 374

 Score =  205 bits (521), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 90/125 (72%), Positives = 111/125 (88%)

Query: 1   KLYFIDFEYGSYSYRGYDIANHFNEYAGYDCDYSLYPSKDEQYHFFRHYLQPDKPHEVSD 60
           KLY IDFEYGSY+YRG+DI NHFNEYAGYDCDYSLYPSK+EQYHF +HYLQPDKP EVS 
Sbjct: 247 KLYLIDFEYGSYNYRGFDIGNHFNEYAGYDCDYSLYPSKEEQYHFIKHYLQPDKPDEVSI 306

Query: 61  RDLEALYIEANTFMLASHFFWALWALIQAKMSPIDFDYLGYFFLRYNEYKKQKEMSSSLA 120
            ++E++++E + + LASH +WA+WA+IQA+MSPI+F+YLGYFFLRYNEYKKQK ++ SL 
Sbjct: 307 AEVESVFVETDAYKLASHLYWAIWAIIQARMSPIEFEYLGYFFLRYNEYKKQKPLTFSLV 366

Query: 121 LSYLS 125
            S+LS
Sbjct: 367 TSHLS 371


>AT1G71697.1 | Symbols: ATCK1, CK | ATCK1 (CHOLINE KINASE 1);
           choline kinase | chr1:26971537-26973177 FORWARD
          Length = 346

 Score = 83.6 bits (205), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 69/121 (57%), Gaps = 8/121 (6%)

Query: 2   LYFIDFEYGSYSYRGYDIANHFNEYAG-------YDCDYSLYPSKDEQYHFFRHYLQPDK 54
           +  ID+EY S++   YDIANHF E A        +  DY+LYP + E+  F   YL    
Sbjct: 223 ITIIDYEYSSFNPIAYDIANHFCEMAANYHSDTPHVLDYTLYPGEGERRRFISTYLG-ST 281

Query: 55  PHEVSDRDLEALYIEANTFMLASHFFWALWALIQAKMSPIDFDYLGYFFLRYNEYKKQKE 114
            +  SD+++E L  +A ++ LA+H FW LW +I   ++ I+FDY+ Y   R+ +Y  +K 
Sbjct: 282 GNATSDKEVERLLKDAESYTLANHIFWGLWGIISGHVNKIEFDYMEYARQRFEQYWLRKP 341

Query: 115 M 115
           +
Sbjct: 342 L 342


>AT4G09760.1 | Symbols:  | choline kinase, putative |
           chr4:6148955-6151150 REVERSE
          Length = 346

 Score = 82.8 bits (203), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 10/124 (8%)

Query: 2   LYFIDFEYGSYSYRGYDIANHFNEYAG-------YDCDYSLYPSKDEQYHFFRHYLQPDK 54
           +  ID+EY SY+   YDIANHF E A        +  DY+LYP ++E+  F  +YL    
Sbjct: 220 ITIIDYEYASYNPIAYDIANHFCEMAADYHSNTPHILDYTLYPGEEERRRFICNYLTSSG 279

Query: 55  PHEVSDRDLEALYIEANTFMLASHFFWALWALIQAKMSPIDFDYLGYFFLRYNEY--KKQ 112
             E  + D+E L  +   + LASH FW LW +I   ++ I+FDY+ Y   R+ +Y  +K 
Sbjct: 280 -EEAREEDIEQLLDDIEKYTLASHLFWGLWGIISGYVNKIEFDYIEYSRQRFKQYWLRKP 338

Query: 113 KEMS 116
           K +S
Sbjct: 339 KLLS 342


>AT4G09760.2 | Symbols:  | choline kinase, putative |
           chr4:6148955-6151150 REVERSE
          Length = 346

 Score = 82.8 bits (203), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 10/124 (8%)

Query: 2   LYFIDFEYGSYSYRGYDIANHFNEYAG-------YDCDYSLYPSKDEQYHFFRHYLQPDK 54
           +  ID+EY SY+   YDIANHF E A        +  DY+LYP ++E+  F  +YL    
Sbjct: 220 ITIIDYEYASYNPIAYDIANHFCEMAADYHSNTPHILDYTLYPGEEERRRFICNYLTSSG 279

Query: 55  PHEVSDRDLEALYIEANTFMLASHFFWALWALIQAKMSPIDFDYLGYFFLRYNEY--KKQ 112
             E  + D+E L  +   + LASH FW LW +I   ++ I+FDY+ Y   R+ +Y  +K 
Sbjct: 280 -EEAREEDIEQLLDDIEKYTLASHLFWGLWGIISGYVNKIEFDYIEYSRQRFKQYWLRKP 338

Query: 113 KEMS 116
           K +S
Sbjct: 339 KLLS 342


>AT1G74320.1 | Symbols:  | choline kinase, putative |
           chr1:27941192-27942903 FORWARD
          Length = 350

 Score = 76.3 bits (186), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 12/117 (10%)

Query: 2   LYFIDFEYGSYSYRGYDIANHFNEYAG-------YDCDYSLYPSKDEQYHFFRHYLQ--P 52
           +  ID+EY  Y+   YDIANHF E A        +  DYS YP  +E+  F + Y+    
Sbjct: 223 ITIIDYEYSCYNPVAYDIANHFCEMAADYHTETPHIMDYSKYPGVEERQRFLKTYMSYSD 282

Query: 53  DKPHEVSDRDLEALYIEANTFMLASHFFWALWALIQAKMSPIDFDYLGYFFLRYNEY 109
           +KP   SD  ++ L  +   + LASH  W LW +I   ++ IDFDY+ Y   R+ +Y
Sbjct: 283 EKP---SDTMVKKLLEDVEKYTLASHLIWGLWGIISEHVNEIDFDYMEYARQRFEQY 336