Jatropha Genome Database

JcCB0356071.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0356071.10 + phase: 0 /partial
         (160 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G45440.1 | Symbols: DHDPS2 | DHDPS2 (DIHYDRODIPICOLINATE SYNT...   231   1e-61
AT3G60880.2 | Symbols: DHDPS, DHDPS1 | dihydrodipicolinate synth...   223   3e-59
AT3G60880.1 | Symbols: DHDPS, DHDPS1 | dihydrodipicolinate synth...   216   3e-57

>AT2G45440.1 | Symbols: DHDPS2 | DHDPS2 (DIHYDRODIPICOLINATE
           SYNTHASE); catalytic/ dihydrodipicolinate synthase/
           lyase | chr2:18731294-18732867 FORWARD
          Length = 365

 Score =  231 bits (589), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 111/158 (70%), Positives = 126/158 (79%)

Query: 1   MAALSGYGVFLKESALQLPRSVSTNYYKRRNAKWSPPQAAIIPNFHLPMRSFEVKNRTSS 60
           MAAL GYG+   +SALQ P     N YKRR++KW  P+AA++PNFHLPMRS EVKNRT++
Sbjct: 1   MAALKGYGLCSMDSALQFPCPKLFNSYKRRSSKWVSPKAAVVPNFHLPMRSLEVKNRTNT 60

Query: 61  EEIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQIVDXXXXXXXXXXXXXXQLMSWDEHI 120
           ++IK+LR+ITAIKTPYLPDGRFDLEAYD LVN+QI +              QLMSWDEHI
Sbjct: 61  DDIKALRVITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHI 120

Query: 121 MLIGHTVNCFGSSIKVIGNTGSNSTREAIHATVQGFAV 158
           MLIGHTVNCFG SIKVIGNTGSNSTREAIHAT QGFAV
Sbjct: 121 MLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAV 158


>AT3G60880.2 | Symbols: DHDPS, DHDPS1 | dihydrodipicolinate synthase
           1 (DHDPS1) (DHDPS) (DHPS1) | chr3:22495086-22496542
           FORWARD
          Length = 365

 Score =  223 bits (569), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 107/158 (67%), Positives = 121/158 (76%)

Query: 1   MAALSGYGVFLKESALQLPRSVSTNYYKRRNAKWSPPQAAIIPNFHLPMRSFEVKNRTSS 60
           M+AL  YG+   +SAL  PRS     YKRRNAKW  P AA++PNFHLPMRS E KNRT++
Sbjct: 1   MSALKNYGLISIDSALHFPRSNQLQSYKRRNAKWVSPIAAVVPNFHLPMRSLEDKNRTNT 60

Query: 61  EEIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQIVDXXXXXXXXXXXXXXQLMSWDEHI 120
           ++I+SLR+ITAIKTPYLPDGRFDL+AYD LVN QI +              QLMSWDEHI
Sbjct: 61  DDIRSLRVITAIKTPYLPDGRFDLQAYDDLVNTQIENGAEGVIVGGTTGEGQLMSWDEHI 120

Query: 121 MLIGHTVNCFGSSIKVIGNTGSNSTREAIHATVQGFAV 158
           MLIGHTVNCFG  IKVIGNTGSNSTREAIHAT QGFA+
Sbjct: 121 MLIGHTVNCFGGRIKVIGNTGSNSTREAIHATEQGFAM 158


>AT3G60880.1 | Symbols: DHDPS, DHDPS1 | dihydrodipicolinate synthase
           1 (DHDPS1) (DHDPS) (DHPS1) | chr3:22495086-22496542
           FORWARD
          Length = 364

 Score =  216 bits (551), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 106/158 (67%), Positives = 120/158 (75%), Gaps = 1/158 (0%)

Query: 1   MAALSGYGVFLKESALQLPRSVSTNYYKRRNAKWSPPQAAIIPNFHLPMRSFEVKNRTSS 60
           M+AL  YG+   +SAL  PRS     YKR NAKW  P AA++PNFHLPMRS E KNRT++
Sbjct: 1   MSALKNYGLISIDSALHFPRSNQLQSYKR-NAKWVSPIAAVVPNFHLPMRSLEDKNRTNT 59

Query: 61  EEIKSLRLITAIKTPYLPDGRFDLEAYDALVNMQIVDXXXXXXXXXXXXXXQLMSWDEHI 120
           ++I+SLR+ITAIKTPYLPDGRFDL+AYD LVN QI +              QLMSWDEHI
Sbjct: 60  DDIRSLRVITAIKTPYLPDGRFDLQAYDDLVNTQIENGAEGVIVGGTTGEGQLMSWDEHI 119

Query: 121 MLIGHTVNCFGSSIKVIGNTGSNSTREAIHATVQGFAV 158
           MLIGHTVNCFG  IKVIGNTGSNSTREAIHAT QGFA+
Sbjct: 120 MLIGHTVNCFGGRIKVIGNTGSNSTREAIHATEQGFAM 157