Jatropha Genome Database
- JcCB0355951.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0355951.10 - phase: 0
(277 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G63520.1 | Symbols: CCD1, ATCCD1, ATNCED1, NCED1 | CCD1 (CARO... 422 e-118
AT4G19170.1 | Symbols: NCED4 | NCED4 (NINE-CIS-EPOXYCAROTENOID D... 156 1e-38
AT1G78390.1 | Symbols: NCED9, ATNCED9 | NCED9 (NINE-CIS-EPOXYCAR... 146 2e-35
AT3G24220.1 | Symbols: NCED6, ATNCED6 | NCED6 (NINE-CIS-EPOXYCAR... 140 8e-34
AT1G30100.1 | Symbols: NCED5, ATNCED5 | NCED5 (NINE-CIS-EPOXYCAR... 139 2e-33
AT3G14440.1 | Symbols: NCED3, ATNCED3, STO1, SIS7 | NCED3 (NINE-... 132 3e-31
AT4G18350.1 | Symbols: NCED2, ATNCED2 | NCED2 (NINE-CIS-EPOXYCAR... 119 2e-27
>AT3G63520.1 | Symbols: CCD1, ATCCD1, ATNCED1, NCED1 | CCD1
(CAROTENOID CLEAVAGE DIOXYGENASE 1);
9-cis-epoxycarotenoid dioxygenase |
chr3:23452940-23455896 FORWARD
Length = 538
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/242 (82%), Positives = 220/242 (90%), Gaps = 3/242 (1%)
Query: 8 QEMVKEKKLIFTFDATKKSRFGVLPRYAKDDRQIRWFELPNCMIFHNANAWEEGDEVVLI 67
+EMVKEKK+I++FD TKK+RFGVLPRYAKD+ IRWFELPNC IFHNANAWEE DEVVLI
Sbjct: 291 KEMVKEKKMIYSFDPTKKARFGVLPRYAKDELMIRWFELPNCFIFHNANAWEEEDEVVLI 350
Query: 68 TCRLQNPDLDMVSGNVKEKLENFTNELYEMRFNMKTGAASQKKLSTSAVDFPRVNESYTG 127
TCRL+NPDLDMVSG VKEKLENF NELYEMRFNMKTG+ASQKKLS SAVDFPR+NE YTG
Sbjct: 351 TCRLENPDLDMVSGKVKEKLENFGNELYEMRFNMKTGSASQKKLSASAVDFPRINECYTG 410
Query: 128 RKQRYVYGTILDSIAKVTGIIKFDLHAEPQPEKQKLEVGGNVKGIFDLGPGRFGSEAIFV 187
+KQRYVYGTILDSIAKVTGIIKFDLHAE + K+ LEVGGN+KGI+DLG GR+GSEAI+V
Sbjct: 411 KKQRYVYGTILDSIAKVTGIIKFDLHAEAETGKRMLEVGGNIKGIYDLGEGRYGSEAIYV 470
Query: 188 PREPGTSSEEDDGYLIFFVHDEKTGKSSANVIDAKTMSSDPVAVVELPHRVPYGFHAFFV 247
PRE ++EEDDGYLIFFVHDE TGKS VIDAKTMS++PVAVVELPHRVPYGFHA FV
Sbjct: 471 PRE---TAEEDDGYLIFFVHDENTGKSCVTVIDAKTMSAEPVAVVELPHRVPYGFHALFV 527
Query: 248 TE 249
TE
Sbjct: 528 TE 529
>AT4G19170.1 | Symbols: NCED4 | NCED4 (NINE-CIS-EPOXYCAROTENOID
DIOXYGENASE 4) | chr4:10481835-10483622 FORWARD
Length = 595
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 132/232 (56%), Gaps = 17/232 (7%)
Query: 21 DATKKSRFGVLPRYAKDDRQIRWFELPNCMIFHNANAWEE--GDEVVLITCRLQNPDLDM 78
D K R GV+P+YA D+ +++WFE+P I H NAW+E G+ VVLI + M
Sbjct: 372 DNGKTPRLGVIPKYAGDESEMKWFEVPGFNIIHAINAWDEDDGNSVVLIAPNI------M 425
Query: 79 VSGNVKEKLENFTNELYEMRFNMKTGAASQKKLSTSAVDFPRVNESYTGRKQRYVYGTIL 138
+ E+++ + +++ ++ TG + +S +DF +N ++ GR RYVY I
Sbjct: 426 SIEHTLERMDLVHALVEKVKIDLVTGIVRRHPISARNLDFAVINPAFLGRCSRYVYAAIG 485
Query: 139 DSIAKVTGIIKFDLHAEPQPEKQKLEVGGNVKGIFDLGPGRFGSEAIFVPREPGTS-SEE 197
D + K++G++K D+ + ++ V + G G +G E FV R+PG +EE
Sbjct: 486 DPMPKISGVVKLDVS---KGDRDDCTVARRM-----YGSGCYGGEPFFVARDPGNPEAEE 537
Query: 198 DDGYLIFFVHDEKTGKSSANVIDAKTMSSDPVAVVELPHRVPYGFHAFFVTE 249
DDGY++ +VHDE TG+S V+DAK+ + VA V LP RVPYGFH FV E
Sbjct: 538 DDGYVVTYVHDEVTGESKFLVMDAKSPELEIVAAVRLPRRVPYGFHGLFVKE 589
>AT1G78390.1 | Symbols: NCED9, ATNCED9 | NCED9
(NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 9);
9-cis-epoxycarotenoid dioxygenase |
chr1:29490895-29492868 REVERSE
Length = 657
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 132/247 (53%), Gaps = 28/247 (11%)
Query: 7 FQEMVKEKKLIFTFDATKKSRFGVLPRYAKDDRQIRWFELPNCMIFHNANAWE--EGDEV 64
EM++ + +D KKSRFG+L + AKD I+W E+P+C FH N+WE E DEV
Sbjct: 426 LPEMIRGGSPV-VYDEKKKSRFGILNKNAKDASSIQWIEVPDCFCFHLWNSWEEPETDEV 484
Query: 65 VLITCRLQNPDLDMVSGNVKEKLENFTNELYEMRFNMKTGAASQKKLSTSAVDFPR--VN 122
V+I + PD E E + L E+R N+KTG ++++ + + V+ VN
Sbjct: 485 VVIGSCMTPPD-----SIFNEHDETLQSVLSEIRLNLKTGESTRRPVISEQVNLEAGMVN 539
Query: 123 ESYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPQPEKQKLEVGGNVKGIFDLGPGRFGS 182
+ GRK RY Y + + KV+G K DL G ++ + G G++G
Sbjct: 540 RNLLGRKTRYAYLALTEPWPKVSGFAKVDLST------------GEIRK-YIYGEGKYGG 586
Query: 183 EAIFVPREPGTSSEEDDGYLIFFVHDEKTGKSSANVIDAKTMSSDPVAVVELPHRVPYGF 242
E +F+P G EED GY++ FVHDE+ KS +I+A M + A V LP RVPYGF
Sbjct: 587 EPLFLPSGDG---EEDGGYIMVFVHDEEKVKSELQLINAVNMKLE--ATVTLPSRVPYGF 641
Query: 243 HAFFVTE 249
H F+++
Sbjct: 642 HGTFISK 648
>AT3G24220.1 | Symbols: NCED6, ATNCED6 | NCED6
(NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 6);
9-cis-epoxycarotenoid dioxygenase | chr3:8761439-8763172
FORWARD
Length = 577
Score = 140 bits (353), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 120/231 (51%), Gaps = 27/231 (11%)
Query: 24 KKSRFGVLPRYAKDDRQIRWFELPNCMIFHNANAW----EEGDEVVLITCRLQNPDLDMV 79
K +RFGVL + I W ++P+C FH NAW EEGD V+++ +P +
Sbjct: 361 KMARFGVLSKQDLTGSDINWVDVPDCFCFHLWNAWEERTEEGDPVIVVIGSCMSPPDTIF 420
Query: 80 SGNVKEKLENFTNELYEMRFNMKTGAASQKKLSTSA-VDFPRVNESYTGRKQRYVYGTIL 138
S E E EL E+R NM+T +++K + T ++ +N SY GRK ++VY I
Sbjct: 421 S----ESGEPTRVELSEIRLNMRTKESNRKVIVTGVNLEAGHINRSYVGRKSQFVYIAIA 476
Query: 139 DSIAKVTGIIKFDLHAEPQPEKQKLEVGGNVKGIFDLGPGRFGSEAIFVPREPGTSSEED 198
D K +GI K D+ G V F+ GP RFG E FVP G EED
Sbjct: 477 DPWPKCSGIAKVDIQ------------NGTVSE-FNYGPSRFGGEPCFVPEGEG---EED 520
Query: 199 DGYLIFFVHDEKTGKSSANVIDAKTMSSDPVAVVELPHRVPYGFHAFFVTE 249
GY++ FV DE+ +S V+DA M VA V LP RVPYGFH FV+E
Sbjct: 521 KGYVMGFVRDEEKDESEFVVVDATDMKQ--VAAVRLPERVPYGFHGTFVSE 569
>AT1G30100.1 | Symbols: NCED5, ATNCED5 | NCED5
(NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5);
9-cis-epoxycarotenoid dioxygenase |
chr1:10571383-10573152 FORWARD
Length = 589
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/239 (38%), Positives = 128/239 (53%), Gaps = 29/239 (12%)
Query: 20 FDATKKSRFGVLPRYAKDDRQIRWFELPNCMIFHNANAWE--EGDEVVLITCRLQNPDLD 77
+D K SRFG+LPR AKD ++ W E P FH NAWE E DEVV+I + D
Sbjct: 368 YDGEKISRFGILPRNAKDASEMVWVESPETFCFHLWNAWESPETDEVVVIGSCMT--PAD 425
Query: 78 MVSGNVKEKLENFTNELYEMRFNMKTGAASQKKLSTSAVDF----PRVNESYTGRKQRYV 133
+ E+L + L E+R N+KTG ++++ + +V VN + GRK RY
Sbjct: 426 SIFNECDEQLNSV---LSEIRLNLKTGKSTRRTIIPGSVQMNLEAGMVNRNLLGRKTRYA 482
Query: 134 YGTILDSIAKVTGIIKFDLHAEPQPEKQKLEVGGNVKGIFDLGPGRFGSEAIFVPREPGT 193
Y I + KV+G K DL G VK F G ++G E F+PR G
Sbjct: 483 YLAIAEPWPKVSGFAKVDLST------------GEVKNHF-YGGKKYGGEPFFLPR--GL 527
Query: 194 SSE-EDDGYLIFFVHDEKTGKSSANVIDAKTMSSDPVAVVELPHRVPYGFHAFFVTEVN 251
S+ EDDGY++ FVHDE++ +S ++++A T+ + A V+LP RVPYGFH FV +
Sbjct: 528 ESDGEDDGYIMSFVHDEESWESELHIVNAVTLELE--ATVKLPSRVPYGFHGTFVNSAD 584
>AT3G14440.1 | Symbols: NCED3, ATNCED3, STO1, SIS7 | NCED3
(NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3);
9-cis-epoxycarotenoid dioxygenase | chr3:4831678-4833477
REVERSE
Length = 599
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 132/246 (53%), Gaps = 31/246 (12%)
Query: 9 EMVKEKKLIFTFDATKKSRFGVLPRYAKDDRQIRWFELPNCMIFHNANAWE--EGDEVVL 66
EM++ + +D K +RFG+L +YA+D I+W + P+C FH NAWE E DEVV+
Sbjct: 368 EMIRGGSPV-VYDKNKVARFGILDKYAEDSSNIKWIDAPDCFCFHLWNAWEEPETDEVVV 426
Query: 67 ITCRLQNPDLDMVSGNVKEKLENFTNELYEMRFNMKTGAASQKKLSTSA-----VDFPRV 121
I + PD E EN + L E+R N+KTG ++++ + ++ ++ V
Sbjct: 427 IGSCMTPPD-----SIFNESDENLKSVLSEIRLNLKTGESTRRPIISNEDQQVNLEAGMV 481
Query: 122 NESYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPQPEKQKLEVGGNVKGIFDLGPGRFG 181
N + GRK ++ Y + + KV+G K DL G VK G R+G
Sbjct: 482 NRNMLGRKTKFAYLALAEPWPKVSGFAKVDL------------TTGEVKKHL-YGDNRYG 528
Query: 182 SEAIFVPREPGTSSEEDDGYLIFFVHDEKTGKSSANVIDAKTMSSDPVAVVELPHRVPYG 241
E +F+P EED+GY++ FVHDEKT KS +++A ++ + A V+LP RVPYG
Sbjct: 529 GEPLFLPG---EGGEEDEGYILCFVHDEKTWKSELQIVNAVSLEVE--ATVKLPSRVPYG 583
Query: 242 FHAFFV 247
FH F+
Sbjct: 584 FHGTFI 589
>AT4G18350.1 | Symbols: NCED2, ATNCED2 | NCED2
(NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 2);
9-cis-epoxycarotenoid dioxygenase |
chr4:10142672-10144423 FORWARD
Length = 583
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 120/245 (48%), Gaps = 27/245 (11%)
Query: 9 EMVKEKKLIFTFDATKKSRFGVLPRYAKDDRQIRWFELPNCMIFHNANAWE--EGDEVVL 66
EM+ K + FD K SR G++P+ A + QI W P FH NAWE E +E+V+
Sbjct: 351 EMISGKSPV-VFDGEKVSRLGIMPKDATEASQIIWVNSPETFCFHLWNAWESPETEEIVV 409
Query: 67 ITCRLQNPDLDMVSGNVKEKLENFTNELYEMRFNMKTGAASQKKLSTSA---VDFPRVNE 123
I + D E+ E+ + L E+R N++T +++ L + ++ VN
Sbjct: 410 IGSCMSPAD-----SIFNERDESLRSVLSEIRINLRTRKTTRRSLLVNEDVNLEIGMVNR 464
Query: 124 SYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPQPEKQKLEVGGNVKGIFDLGPGRFGSE 183
+ GRK R+ + I KV+G K DL E +K GG ++G E
Sbjct: 465 NRLGRKTRFAFLAIAYPWPKVSGFAKVDLCTG---EMKKYIYGGE----------KYGGE 511
Query: 184 AIFVPREPGTSSE-EDDGYLIFFVHDEKTGKSSANVIDAKTMSSDPVAVVELPHRVPYGF 242
F+P G E EDDGY+ VHDE+T S +I+A + + A ++LP RVPYGF
Sbjct: 512 PFFLPGNSGNGEENEDDGYIFCHVHDEETKTSELQIINAVNLKLE--ATIKLPSRVPYGF 569
Query: 243 HAFFV 247
H FV
Sbjct: 570 HGTFV 574