Jatropha Genome Database

JcCB0354791.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0354791.10 - phase: 1 /partial
         (102 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79550.2 | Symbols: PGK | PGK (PHOSPHOGLYCERATE KINASE); phos...   177   2e-45
AT1G79550.1 | Symbols: PGK | PGK (PHOSPHOGLYCERATE KINASE); phos...   177   2e-45
AT1G56190.1 | Symbols:  | phosphoglycerate kinase, putative | ch...   175   5e-45
AT1G56190.2 | Symbols:  | phosphoglycerate kinase, putative | ch...   174   1e-44
AT3G12780.1 | Symbols: PGK1 | PGK1 (PHOSPHOGLYCERATE KINASE 1); ...   171   7e-44

>AT1G79550.2 | Symbols: PGK | PGK (PHOSPHOGLYCERATE KINASE);
           phosphoglycerate kinase | chr1:29924347-29926295 REVERSE
          Length = 401

 Score =  177 bits (448), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 88/97 (90%), Positives = 94/97 (96%)

Query: 1   VKTFSEALETTKTVIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 60
           +KTFSEAL+TTKT+IWNGPMGVFEFDKFA GTEA+AK+LAELSGKGVTTIIGGGDSVAAV
Sbjct: 305 IKTFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAVAKQLAELSGKGVTTIIGGGDSVAAV 364

Query: 61  EKVGVADVMSHISTGGGASLELLEGKELPGVLALDEA 97
           EKVG+AD MSHISTGGGASLELLEGK LPGVLALDEA
Sbjct: 365 EKVGLADKMSHISTGGGASLELLEGKPLPGVLALDEA 401


>AT1G79550.1 | Symbols: PGK | PGK (PHOSPHOGLYCERATE KINASE);
           phosphoglycerate kinase | chr1:29924347-29926295 REVERSE
          Length = 401

 Score =  177 bits (448), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 88/97 (90%), Positives = 94/97 (96%)

Query: 1   VKTFSEALETTKTVIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 60
           +KTFSEAL+TTKT+IWNGPMGVFEFDKFA GTEA+AK+LAELSGKGVTTIIGGGDSVAAV
Sbjct: 305 IKTFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAVAKQLAELSGKGVTTIIGGGDSVAAV 364

Query: 61  EKVGVADVMSHISTGGGASLELLEGKELPGVLALDEA 97
           EKVG+AD MSHISTGGGASLELLEGK LPGVLALDEA
Sbjct: 365 EKVGLADKMSHISTGGGASLELLEGKPLPGVLALDEA 401


>AT1G56190.1 | Symbols:  | phosphoglycerate kinase, putative |
           chr1:21028403-21030454 FORWARD
          Length = 478

 Score =  175 bits (443), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 90/102 (88%), Positives = 96/102 (94%)

Query: 1   VKTFSEALETTKTVIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 60
           VKTF+EAL+TT+TVIWNGPMGVFEF+KFA GTEA+A KLAELS KGVTTIIGGGDSVAAV
Sbjct: 377 VKTFNEALDTTQTVIWNGPMGVFEFEKFAKGTEAVANKLAELSKKGVTTIIGGGDSVAAV 436

Query: 61  EKVGVADVMSHISTGGGASLELLEGKELPGVLALDEATPVAV 102
           EKVGVA VMSHISTGGGASLELLEGK LPGV+ALDEATPV V
Sbjct: 437 EKVGVAGVMSHISTGGGASLELLEGKVLPGVVALDEATPVTV 478


>AT1G56190.2 | Symbols:  | phosphoglycerate kinase, putative |
           chr1:21028622-21030454 FORWARD
          Length = 405

 Score =  174 bits (441), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 90/102 (88%), Positives = 96/102 (94%)

Query: 1   VKTFSEALETTKTVIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 60
           VKTF+EAL+TT+TVIWNGPMGVFEF+KFA GTEA+A KLAELS KGVTTIIGGGDSVAAV
Sbjct: 304 VKTFNEALDTTQTVIWNGPMGVFEFEKFAKGTEAVANKLAELSKKGVTTIIGGGDSVAAV 363

Query: 61  EKVGVADVMSHISTGGGASLELLEGKELPGVLALDEATPVAV 102
           EKVGVA VMSHISTGGGASLELLEGK LPGV+ALDEATPV V
Sbjct: 364 EKVGVAGVMSHISTGGGASLELLEGKVLPGVVALDEATPVTV 405


>AT3G12780.1 | Symbols: PGK1 | PGK1 (PHOSPHOGLYCERATE KINASE 1);
           phosphoglycerate kinase | chr3:4061127-4063140 REVERSE
          Length = 481

 Score =  171 bits (434), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 88/102 (86%), Positives = 94/102 (92%)

Query: 1   VKTFSEALETTKTVIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 60
           +KTF+EAL+TT+TVIWNGPMGVFE +KFA GTEAIA KLAELS KGVTTIIGGGDSVAAV
Sbjct: 380 IKTFNEALDTTQTVIWNGPMGVFEMEKFAAGTEAIANKLAELSEKGVTTIIGGGDSVAAV 439

Query: 61  EKVGVADVMSHISTGGGASLELLEGKELPGVLALDEATPVAV 102
           EKVGVA VMSHISTGGGASLELLEGK LPGV+ALDEA PV V
Sbjct: 440 EKVGVAGVMSHISTGGGASLELLEGKVLPGVIALDEAIPVTV 481