Jatropha Genome Database

JcCB0354521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0354521.10 - phase: 0 
         (145 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G35360.1 | Symbols:  | pantothenate kinase family protein | c...   216   3e-57
AT2G17340.1 | Symbols:  | pantothenate kinase-related | chr2:754...   206   4e-54
AT2G17320.1 | Symbols:  | pantothenate kinase-related | chr2:753...   179   4e-46

>AT4G35360.1 | Symbols:  | pantothenate kinase family protein |
           chr4:16812303-16814656 REVERSE
          Length = 367

 Score =  216 bits (550), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 101/119 (84%), Positives = 110/119 (92%)

Query: 1   MESSSELVPFPLLMTPIESNYRACTIPYRFPSDNPRKATPTELQWIDLFYSSIPSFKKRA 60
           MES SE+V  PLL TPIESNYRACTIPYRFPSDNPRKATPTE+ WIDLF +SIPSFK+RA
Sbjct: 1   MESDSEMVALPLLPTPIESNYRACTIPYRFPSDNPRKATPTEISWIDLFSNSIPSFKERA 60

Query: 61  ENDTTVTDAPAKAEKFAQRYSEILEDLKKDPESHGGPPDCILLCRLREQILRELGFRDI 119
           E+DTTV DAP +AEKFA+RY+EILEDLKKDPESHGGPPDCILLCR+RE ILRELGFRDI
Sbjct: 61  ESDTTVPDAPVRAEKFAKRYAEILEDLKKDPESHGGPPDCILLCRIRELILRELGFRDI 119


>AT2G17340.1 | Symbols:  | pantothenate kinase-related |
           chr2:7541615-7544089 REVERSE
          Length = 367

 Score =  206 bits (525), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 95/119 (79%), Positives = 108/119 (90%)

Query: 1   MESSSELVPFPLLMTPIESNYRACTIPYRFPSDNPRKATPTELQWIDLFYSSIPSFKKRA 60
           MES SE+VPFP L  PIE+NYRACTIPYRFPSD+P+KATP E+ WI++F +SIPSFKKRA
Sbjct: 1   MESDSEMVPFPQLPMPIENNYRACTIPYRFPSDDPKKATPNEISWINVFANSIPSFKKRA 60

Query: 61  ENDTTVTDAPAKAEKFAQRYSEILEDLKKDPESHGGPPDCILLCRLREQILRELGFRDI 119
           E+D TV DAPA+AEKFA+RY+ ILEDLKKDPESHGGPPD ILLCRLREQ+LRELGFRDI
Sbjct: 61  ESDITVPDAPARAEKFAERYAGILEDLKKDPESHGGPPDGILLCRLREQVLRELGFRDI 119


>AT2G17320.1 | Symbols:  | pantothenate kinase-related |
           chr2:7533537-7535876 REVERSE
          Length = 361

 Score =  179 bits (455), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 81/113 (71%), Positives = 99/113 (87%)

Query: 7   LVPFPLLMTPIESNYRACTIPYRFPSDNPRKATPTELQWIDLFYSSIPSFKKRAENDTTV 66
           ++PFPLL TPIE+NYRACTIPYRFPSDN +KATPTE+ WI++F +SIPSFKKRAE+DT+V
Sbjct: 1   MIPFPLLPTPIETNYRACTIPYRFPSDNLKKATPTEISWINVFANSIPSFKKRAESDTSV 60

Query: 67  TDAPAKAEKFAQRYSEILEDLKKDPESHGGPPDCILLCRLREQILRELGFRDI 119
            DAPA+A+ F QRY+  LE  KKDPES+GGPPD ++L R+RE +LRELGFRDI
Sbjct: 61  PDAPARAKIFEQRYAGFLEGWKKDPESNGGPPDGVILGRVREHLLRELGFRDI 113