Jatropha Genome Database
- JcCB0354231.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0354231.10 + phase: 0 /partial
(145 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G39790.1 | Symbols: | unknown protein | chr4:18462316-184645... 174 2e-44
AT2G27090.1 | Symbols: | unknown protein | chr2:11567691-115703... 117 2e-27
AT4G30130.1 | Symbols: | unknown protein | chr4:14735401-147377... 66 6e-12
AT2G19090.1 | Symbols: | unknown protein | chr2:8265178-8267879... 62 2e-10
AT1G52320.4 | Symbols: | unknown protein | chr1:19485399-194872... 59 7e-10
AT1G52320.3 | Symbols: | unknown protein | chr1:19485399-194872... 59 7e-10
AT1G52320.1 | Symbols: | unknown protein | chr1:19485399-194872... 59 7e-10
AT1G52320.2 | Symbols: | unknown protein | chr1:19484421-194872... 59 9e-10
AT5G25590.1 | Symbols: | INVOLVED IN: N-terminal protein myrist... 57 3e-09
AT3G51290.1 | Symbols: | proline-rich family protein | chr3:190... 57 3e-09
AT2G17110.1 | Symbols: | unknown protein | chr2:7443366-7445969... 50 7e-07
>AT4G39790.1 | Symbols: | unknown protein | chr4:18462316-18464584
REVERSE
Length = 657
Score = 174 bits (441), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/155 (59%), Positives = 108/155 (69%), Gaps = 29/155 (18%)
Query: 20 EREDPSEFITHRAKDFLSSIKDIEHRFFRASESGKEVSRMLEANNIRVGYSE-------- 71
EREDPSEFITHRAKDF+SS+KDIEH+FFRASESG+EVSRMLE N IRVG+++
Sbjct: 238 EREDPSEFITHRAKDFVSSMKDIEHKFFRASESGREVSRMLEVNKIRVGFADMTGKGNSI 297
Query: 72 -------------------TKEPAEH-VTKVITWKRTAXXXXXXXXNPLATAARDDVSD- 110
++EP H VTKVI WKRT+ NPL +++D D
Sbjct: 298 AFLAALKRACCRGKSYSPVSQEPLSHQVTKVIVWKRTSSSRSSTSRNPLIQTSKEDHDDE 357
Query: 111 SGSDFVEEFCMIAGSHSSTLDRLYAWERKLYDEVK 145
SGSDF+EEFCMI+GSHSS+LDRLYAWERKLYDEVK
Sbjct: 358 SGSDFIEEFCMISGSHSSSLDRLYAWERKLYDEVK 392
>AT2G27090.1 | Symbols: | unknown protein | chr2:11567691-11570345
REVERSE
Length = 743
Score = 117 bits (294), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 78/140 (55%), Gaps = 26/140 (18%)
Query: 32 AKDFLSSIKDIEHRFFRASESGKEVSRMLEANNIRV-----------GYSE--------- 71
+DFLSS+K+IE F +ASE+GKEV RMLEAN + G S
Sbjct: 306 PRDFLSSMKEIELLFVKASETGKEVPRMLEANKLHFRPIVPSKESGSGASSLFKTCLSCG 365
Query: 72 ------TKEPAEHVTKVITWKRTAXXXXXXXXNPLATAARDDVSDSGSDFVEEFCMIAGS 125
+EPA++ K +TW RT NPL DDV + S+ E CMIAGS
Sbjct: 366 EDPKDVPEEPAQNSVKYLTWHRTESSRSSSSRNPLGGMNSDDVEELNSNLFENICMIAGS 425
Query: 126 HSSTLDRLYAWERKLYDEVK 145
H+STLDRLYAWERKLYDEVK
Sbjct: 426 HASTLDRLYAWERKLYDEVK 445
>AT4G30130.1 | Symbols: | unknown protein | chr4:14735401-14737793
FORWARD
Length = 725
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 71/140 (50%), Gaps = 7/140 (5%)
Query: 11 AVTMKDLSAEREDPSEFITHRAKDFLSSIKDIEHRFFRASESGKEVSRMLEANNIRVGYS 70
VT D E + ++ R IKD+E +F +GKEVS +LEA+ RV Y+
Sbjct: 281 GVTSDDGKGETPGFTVYLNRRPTSMAEVIKDLEDQFAIICTAGKEVSGLLEAS--RVQYT 338
Query: 71 ETKEPA-----EHVTKVITWKRTAXXXXXXXXNPLATAARDDVSDSGSDFVEEFCMIAGS 125
+ E + V + + + +R +S S+F EE CM++GS
Sbjct: 339 SSNELSAMTMLNPVALFRSGGSSRSSSSSRFLISSSGGSRASEFESSSEFSEESCMLSGS 398
Query: 126 HSSTLDRLYAWERKLYDEVK 145
H STLDRLYAWE+KLYDEVK
Sbjct: 399 HQSTLDRLYAWEKKLYDEVK 418
>AT2G19090.1 | Symbols: | unknown protein | chr2:8265178-8267879
REVERSE
Length = 814
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 10 KAVTMKDLSAEREDP-----SEFITHRAKDFLSSIKDIEHRFFRASESGKEVSRMLEANN 64
K MK++ R+D + ++ R IKD+E +F ++ KEVS +LEA
Sbjct: 357 KVQEMKNVVGVRDDAKTTGFTVYVNRRPTSMAEVIKDLEDQFTTICDAAKEVSGLLEAGR 416
Query: 65 IRVGYSETKEPAEHVTKVITWKRTAXXXXXXXXNPLATAARDDVSDSGS--DFVEEFCMI 122
+ S A + + R+ + ++ S S S D +E CMI
Sbjct: 417 AQYTSSFNDHSARKMLNPVALFRSGSSRSSSSRFLITSSGGSRESGSESRSDVSDESCMI 476
Query: 123 AGSHSSTLDRLYAWERKLYDEVK 145
+GSH +TLDRL+AWE+KLYDEV+
Sbjct: 477 SGSHQTTLDRLFAWEKKLYDEVR 499
>AT1G52320.4 | Symbols: | unknown protein | chr1:19485399-19487204
FORWARD
Length = 472
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 25/122 (20%)
Query: 29 THRAKDFLSSIKDIEHRFFRASESGKEVSRMLEANNIRV--GYSETKEPAEH---VTKVI 83
TH A F+ +++ F +ASES +VS+MLEA + +++ + +H V +VI
Sbjct: 23 THLANVFI----ELDDNFLKASESAHDVSKMLEATRLHYHSNFADNRGHIDHSARVMRVI 78
Query: 84 TWKRTAXXXXXXXXNPLATAARDDVSDSGSDFVEEFCMIAGSHSSTLDRLYAWERKLYDE 143
TW R+ P A +DDV +EE +H++ LD+L AWE+KLYDE
Sbjct: 79 TWNRSFRGI------PNADDGKDDVD------LEE----NETHATVLDKLLAWEKKLYDE 122
Query: 144 VK 145
VK
Sbjct: 123 VK 124
>AT1G52320.3 | Symbols: | unknown protein | chr1:19485399-19487204
FORWARD
Length = 472
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 25/122 (20%)
Query: 29 THRAKDFLSSIKDIEHRFFRASESGKEVSRMLEANNIRV--GYSETKEPAEH---VTKVI 83
TH A F+ +++ F +ASES +VS+MLEA + +++ + +H V +VI
Sbjct: 23 THLANVFI----ELDDNFLKASESAHDVSKMLEATRLHYHSNFADNRGHIDHSARVMRVI 78
Query: 84 TWKRTAXXXXXXXXNPLATAARDDVSDSGSDFVEEFCMIAGSHSSTLDRLYAWERKLYDE 143
TW R+ P A +DDV +EE +H++ LD+L AWE+KLYDE
Sbjct: 79 TWNRSFRGI------PNADDGKDDVD------LEE----NETHATVLDKLLAWEKKLYDE 122
Query: 144 VK 145
VK
Sbjct: 123 VK 124
>AT1G52320.1 | Symbols: | unknown protein | chr1:19485399-19487204
FORWARD
Length = 472
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 25/122 (20%)
Query: 29 THRAKDFLSSIKDIEHRFFRASESGKEVSRMLEANNIRV--GYSETKEPAEH---VTKVI 83
TH A F+ +++ F +ASES +VS+MLEA + +++ + +H V +VI
Sbjct: 23 THLANVFI----ELDDNFLKASESAHDVSKMLEATRLHYHSNFADNRGHIDHSARVMRVI 78
Query: 84 TWKRTAXXXXXXXXNPLATAARDDVSDSGSDFVEEFCMIAGSHSSTLDRLYAWERKLYDE 143
TW R+ P A +DDV +EE +H++ LD+L AWE+KLYDE
Sbjct: 79 TWNRSFRGI------PNADDGKDDVD------LEE----NETHATVLDKLLAWEKKLYDE 122
Query: 144 VK 145
VK
Sbjct: 123 VK 124
>AT1G52320.2 | Symbols: | unknown protein | chr1:19484421-19487204
FORWARD
Length = 798
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 25/122 (20%)
Query: 29 THRAKDFLSSIKDIEHRFFRASESGKEVSRMLEANNIRV--GYSETKEPAEH---VTKVI 83
TH A F+ +++ F +ASES +VS+MLEA + +++ + +H V +VI
Sbjct: 349 THLANVFI----ELDDNFLKASESAHDVSKMLEATRLHYHSNFADNRGHIDHSARVMRVI 404
Query: 84 TWKRTAXXXXXXXXNPLATAARDDVSDSGSDFVEEFCMIAGSHSSTLDRLYAWERKLYDE 143
TW R+ P A +DDV D E +H++ LD+L AWE+KLYDE
Sbjct: 405 TWNRSFRGI------PNADDGKDDV-----DLEEN-----ETHATVLDKLLAWEKKLYDE 448
Query: 144 VK 145
VK
Sbjct: 449 VK 450
>AT5G25590.1 | Symbols: | INVOLVED IN: N-terminal protein
myristoylation; EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF630
(InterPro:IPR006868), Protein of unknown function DUF632
(InterPro:IPR006867), Actin-binding FH2
(InterPro:IPR015425); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G52320.4); Has 31848
Blast hits to 18905 proteins in 762 species: Archae -
79; Bacteria - 761; Metazoa - 15943; Fungi - 3494;
Plants - 1748; Viruses - 431; Other Eukaryotes - 9392
(source: NCBI BLink). | chr5:8906684-8909847 REVERSE
Length = 775
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 21/117 (17%)
Query: 34 DFLSSIKDIEHRFFRASESGKEVSRMLEANNIRV--GYSETKEPAEH---VTKVITWKRT 88
+ + + +I+ RF +ASE +EVS+MLEA + +++ + +H V +VITW ++
Sbjct: 330 NLMKILDEIDDRFLKASECAQEVSKMLEATRLHYHSNFADNRGYVDHSARVMRVITWNKS 389
Query: 89 AXXXXXXXXNPLATAARDDVSDSGSDFVEEFCMIAGSHSSTLDRLYAWERKLYDEVK 145
+DD SD E +H++ LD+L AWE+KLYDEVK
Sbjct: 390 LRGISN------GEGGKDD---QESDEHE-------THATVLDKLLAWEKKLYDEVK 430
>AT3G51290.1 | Symbols: | proline-rich family protein |
chr3:19039980-19042437 FORWARD
Length = 602
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 16/124 (12%)
Query: 28 ITHRAKDFLSSIKDIEHRFFRASESGKEVSRMLEANNIRVGYSETKEPAEHVTKVITWKR 87
++ KD + IK+++ F +A++SG +S +LE + +S + K
Sbjct: 195 VSRNGKDLMEIIKEVDEYFLKAADSGAPLSSLLEISTSITDFSGHSKSG---------KM 245
Query: 88 TAXXXXXXXXNPLATAARDDVSDSGSDF------VEEFCMIAGSHSSTLDRLYAWERKLY 141
+ NP + R S++ + C I GSHSST+DRLYAWE+KLY
Sbjct: 246 YSSSNYECNLNPTSFWTRGFAPSKLSEYRNAGGVIGGNC-IVGSHSSTVDRLYAWEKKLY 304
Query: 142 DEVK 145
EVK
Sbjct: 305 QEVK 308
>AT2G17110.1 | Symbols: | unknown protein | chr2:7443366-7445969
REVERSE
Length = 733
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 19/115 (16%)
Query: 40 KDIEHRFFRASESGKEVSRMLEANNIRVG---------YSETKEPAEHVTKVITWKRTAX 90
K+IE +F RA+ESG E++ MLE G Y T P+ V++ +++
Sbjct: 316 KEIEAQFLRAAESGNEIAVMLEVGKHPYGRKNVSSKKLYEGTPSPS-----VVSSAQSST 370
Query: 91 XXXXXXXNPLATAARDDVSDSGSDFVEEFCMIAGSHSSTLDRLYAWERKLYDEVK 145
A A+ + + +D E + + + SSTL +L+ WE+KLYDEVK
Sbjct: 371 SKKAK-----AEASSSVTAPTYADIEAELALKSRNLSSTLHKLHLWEKKLYDEVK 420