Jatropha Genome Database

JcCB0341751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0341751.10 - phase: 0 
         (341 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G49820.1 | Symbols: ATMTK | ATMTK (ARABIDOPSIS THALIANA S-MET...   448   e-126

>AT1G49820.1 | Symbols: ATMTK | ATMTK (ARABIDOPSIS THALIANA
           S-METHYL-5-THIORIBOSE KINASE); S-methyl-5-thioribose
           kinase | chr1:18443005-18444907 FORWARD
          Length = 420

 Score =  448 bits (1152), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 208/293 (70%), Positives = 242/293 (82%), Gaps = 2/293 (0%)

Query: 1   MAFSEFRPLDEKALIEYIKATPVLSNKIGNEF--DNLEVKEVGDGNLNFVYIVIGSAGSF 58
           M+F EF PL+EK+L++YIK+TP LS+KIG +   D+L +KEVGDGNLNFV+IV+GS+GS 
Sbjct: 1   MSFEEFTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSL 60

Query: 59  VIKQALPYIRLIGESWPMTKERAYFEGRALKEHGKLSPEHVPEVYHFDRTMSLIAMRYLE 118
           VIKQALPYIR IGESWPMTKERAYFE   L++HG LSP+HVPEVYHFDRTM+LI MRYLE
Sbjct: 61  VIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLE 120

Query: 119 PPHIILRKGLIAGVKYPHLAEHISDYMARXXXXXXXXXXXXXEHKRVVAEFCGNVELCRL 178
           PPHIILRKGLIAG++YP LA+H+SDYMA+             EH+R V EFCGNVELCRL
Sbjct: 121 PPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRRAVTEFCGNVELCRL 180

Query: 179 TEQVVFSDPYKVSEYNRWTSPYLDQDAVAVREDNILKLEIAELKSTFCEQAQALIHGDLH 238
           TEQVVFSDPY+VS +NRWTSPYLD DA AVRED+ LKLEIAELKS FCE+AQALIHGDLH
Sbjct: 181 TEQVVFSDPYRVSTFNRWTSPYLDDDAKAVREDSALKLEIAELKSMFCERAQALIHGDLH 240

Query: 239 XXXXXXXXXXXXXIDPEFAFYGPMGFDIGAFIGNLILAYFSQDGHASSVDDRK 291
                        IDPEF+FYGPMGFDIGA++GNLILA+F+QDGHA+  +DRK
Sbjct: 241 TGSVMVTQDSTQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRK 293