Jatropha Genome Database
- JcCB0339221.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0339221.10 + phase: 0
(172 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G30070.1 | Symbols: ATKT1, ATKT1P, ATKUP1, KUP1 | ATKT1 (POTA... 71 4e-13
AT1G70300.1 | Symbols: KUP6 | KUP6; potassium ion transmembrane ... 63 1e-10
AT5G14880.1 | Symbols: | potassium transporter, putative | chr5... 61 3e-10
AT2G40540.2 | Symbols: KT2, ATKT2, SHY3, KUP2, ATKUP2, TRK2 | KT... 60 5e-10
AT2G40540.1 | Symbols: KT2, ATKT2, SHY3, KUP2, ATKUP2, TRK2 | KT... 60 5e-10
AT4G23640.1 | Symbols: TRH1, ATKT3, KUP4 | TRH1 (TINY ROOT HAIR ... 60 5e-10
AT3G02050.1 | Symbols: KUP3, ATKUP3, ATKT4 | KUP3 (K+ UPTAKE TRA... 60 6e-10
AT4G13420.1 | Symbols: HAK5, ATHAK5 | HAK5 (HIGH AFFINITY K+ TRA... 55 2e-08
>AT2G30070.1 | Symbols: ATKT1, ATKT1P, ATKUP1, KUP1 | ATKT1
(POTASSIUM TRANSPORTER 1); potassium ion transmembrane
transporter | chr2:12835097-12838466 FORWARD
Length = 712
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 36/42 (85%)
Query: 80 LLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
L LAYQS GV+YGDL TSPLYVYK+TFSG L L+E+D EIFG
Sbjct: 26 LTLAYQSLGVIYGDLSTSPLYVYKTTFSGKLSLHEDDEEIFG 67
>AT1G70300.1 | Symbols: KUP6 | KUP6; potassium ion transmembrane
transporter | chr1:26477993-26481233 REVERSE
Length = 782
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 68 FLNYMQQLYKRTLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
+ N ++ ++ L LAYQS GVVYGDL SPLYVYKSTF+ + E + EIFG
Sbjct: 8 YQNAKKESWRTVLTLAYQSLGVVYGDLSISPLYVYKSTFAEDIHHSESNEEIFG 61
>AT5G14880.1 | Symbols: | potassium transporter, putative |
chr5:4814244-4817667 FORWARD
Length = 781
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 35/49 (71%)
Query: 73 QQLYKRTLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
++ + L LAYQS GVVYGDL TSPLYVYKSTF+ + E + EIFG
Sbjct: 14 KESWWTVLTLAYQSLGVVYGDLATSPLYVYKSTFAEDITHSETNEEIFG 62
>AT2G40540.2 | Symbols: KT2, ATKT2, SHY3, KUP2, ATKUP2, TRK2 | KT2
(POTASSIUM TRANSPORTER 2); potassium ion transmembrane
transporter | chr2:16931445-16934516 FORWARD
Length = 794
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 73 QQLYKRTLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
++ ++ LLLAYQS GVVYGDL SPLYV+KSTF+ ++ E + EI+G
Sbjct: 16 KESWRSVLLLAYQSLGVVYGDLSISPLYVFKSTFAEDIQHSETNEEIYG 64
>AT2G40540.1 | Symbols: KT2, ATKT2, SHY3, KUP2, ATKUP2, TRK2 | KT2
(POTASSIUM TRANSPORTER 2); potassium ion transmembrane
transporter | chr2:16931445-16934516 FORWARD
Length = 794
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 73 QQLYKRTLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
++ ++ LLLAYQS GVVYGDL SPLYV+KSTF+ ++ E + EI+G
Sbjct: 16 KESWRSVLLLAYQSLGVVYGDLSISPLYVFKSTFAEDIQHSETNEEIYG 64
>AT4G23640.1 | Symbols: TRH1, ATKT3, KUP4 | TRH1 (TINY ROOT HAIR 1);
potassium ion transmembrane transporter |
chr4:12320476-12324291 REVERSE
Length = 775
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 77 KRTLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
+ LLLAYQSFG+V+GDL SPLYVYK TF G LR ++ + IFG
Sbjct: 9 NQILLLAYQSFGLVFGDLSISPLYVYKCTFYGGLRHHQTEDTIFG 53
>AT3G02050.1 | Symbols: KUP3, ATKUP3, ATKT4 | KUP3 (K+ UPTAKE
TRANSPORTER 3); potassium ion transmembrane transporter
| chr3:350815-354135 FORWARD
Length = 789
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 32/43 (74%)
Query: 79 TLLLAYQSFGVVYGDLCTSPLYVYKSTFSGSLRLYEEDHEIFG 121
L+LAYQSFGVVYGDL TSPLYV+ STF G L + + +FG
Sbjct: 25 NLILAYQSFGVVYGDLSTSPLYVFPSTFIGKLHKHHNEDAVFG 67
>AT4G13420.1 | Symbols: HAK5, ATHAK5 | HAK5 (HIGH AFFINITY K+
TRANSPORTER 5); potassium ion transmembrane transporter/
potassium:sodium symporter | chr4:7797038-7802174
REVERSE
Length = 785
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 60/155 (38%), Gaps = 62/155 (40%)
Query: 76 YKRTLLLAYQSFGVVYGDLCTSPLYVYKSTFS---------------------------- 107
++ T+ LA+QS GVVYGD+ TSPLYVY STF+
Sbjct: 55 WRTTMSLAFQSLGVVYGDIGTSPLYVYASTFTDGINDKDDVVGVLSLIIYTITLVALLKY 114
Query: 108 -------------GSLRLYE----------------EDHEIFGPTKESKTSLL-----IK 133
G+ LY ED E+ T E T+ L IK
Sbjct: 115 VFIVLQANDNGEGGTFALYSLICRYAKMGLIPNQEPEDVELSNYTLELPTTQLRRAHMIK 174
Query: 134 EFFEXXXXXXXXXXXXXXXGTSMVIGDGILTPTMS 168
E E GTSMVIGDGILTP++S
Sbjct: 175 EKLENSKFAKIILFLVTIMGTSMVIGDGILTPSIS 209