Jatropha Genome Database

JcCB0337681.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0337681.10 + phase: 0 /partial
         (77 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G02280.1 | Symbols: SUS3, ATSUS3 | SUS3 (sucrose synthase 3);...   122   6e-29
AT5G49190.1 | Symbols: SUS2, SSA, ATSUS2 | SUS2 (SUCROSE SYNTHAS...    79   5e-16
AT5G20830.2 | Symbols: SUS1, ASUS1, atsus1 | SUS1 (SUCROSE SYNTH...    59   5e-10
AT5G20830.1 | Symbols: SUS1, ASUS1, atsus1 | SUS1 (SUCROSE SYNTH...    59   5e-10
AT3G43190.1 | Symbols: SUS4, ATSUS4 | SUS4; UDP-glycosyltransfer...    58   1e-09

>AT4G02280.1 | Symbols: SUS3, ATSUS3 | SUS3 (sucrose synthase 3);
          UDP-glycosyltransferase/ sucrose synthase/ transferase,
          transferring glycosyl groups | chr4:995166-998719
          FORWARD
          Length = 809

 Score =  122 bits (305), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 58/76 (76%), Positives = 66/76 (86%)

Query: 1  MANPKLGRIPSMRERVEDTLSAHRNELVSLLCRYVDQGKGILQPHTLIDELDSVVGEDGT 60
          MANPKL R+ S R+RV+DTLSAHRNELV+LL RYVDQGKGILQPH LIDEL+SV+G+D T
Sbjct: 1  MANPKLTRVLSTRDRVQDTLSAHRNELVALLSRYVDQGKGILQPHNLIDELESVIGDDET 60

Query: 61 RLGLRDGPFGEALKSA 76
          +  L DGPFGE LKSA
Sbjct: 61 KKSLSDGPFGEILKSA 76


>AT5G49190.1 | Symbols: SUS2, SSA, ATSUS2 | SUS2 (SUCROSE SYNTHASE
          2); UDP-glycosyltransferase/ sucrose synthase/
          transferase, transferring glycosyl groups |
          chr5:19943369-19947189 REVERSE
          Length = 807

 Score = 79.3 bits (194), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 46/71 (64%)

Query: 7  GRIPSMRERVEDTLSAHRNELVSLLCRYVDQGKGILQPHTLIDELDSVVGEDGTRLGLRD 66
          GR  +MRE V D +SA RNEL+SL  RYV QGKGILQ H LIDE    V  DGT   L  
Sbjct: 4  GRFETMREWVYDAISAQRNELLSLFSRYVAQGKGILQSHQLIDEFLKTVKVDGTLEDLNK 63

Query: 67 GPFGEALKSAQ 77
           PF + L+SA+
Sbjct: 64 SPFMKVLQSAE 74


>AT5G20830.2 | Symbols: SUS1, ASUS1, atsus1 | SUS1 (SUCROSE
          SYNTHASE 1); UDP-glycosyltransferase/ sucrose synthase
          | chr5:7050599-7054032 REVERSE
          Length = 808

 Score = 59.3 bits (142), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 4/79 (5%)

Query: 1  MANPK--LGRIPSMRERVEDTLSAHRNELVSLLCRYVDQGKGILQPHTLIDELDSVVGED 58
          MAN +  + R+ S RER+ +TL + RNE+++LL R   +GKGILQ + +I E +++   +
Sbjct: 1  MANAERMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEAL--PE 58

Query: 59 GTRLGLRDGPFGEALKSAQ 77
           TR  L  GPF + LKS Q
Sbjct: 59 QTRKKLEGGPFFDLLKSTQ 77


>AT5G20830.1 | Symbols: SUS1, ASUS1, atsus1 | SUS1 (SUCROSE
          SYNTHASE 1); UDP-glycosyltransferase/ sucrose synthase
          | chr5:7050599-7054032 REVERSE
          Length = 808

 Score = 59.3 bits (142), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 4/79 (5%)

Query: 1  MANPK--LGRIPSMRERVEDTLSAHRNELVSLLCRYVDQGKGILQPHTLIDELDSVVGED 58
          MAN +  + R+ S RER+ +TL + RNE+++LL R   +GKGILQ + +I E +++   +
Sbjct: 1  MANAERMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEAL--PE 58

Query: 59 GTRLGLRDGPFGEALKSAQ 77
           TR  L  GPF + LKS Q
Sbjct: 59 QTRKKLEGGPFFDLLKSTQ 77


>AT3G43190.1 | Symbols: SUS4, ATSUS4 | SUS4;
          UDP-glycosyltransferase/ sucrose synthase/ transferase,
          transferring glycosyl groups | chr3:15179204-15182577
          REVERSE
          Length = 808

 Score = 58.2 bits (139), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 4/79 (5%)

Query: 1  MANPK--LGRIPSMRERVEDTLSAHRNELVSLLCRYVDQGKGILQPHTLIDELDSVVGED 58
          MAN +  + R+ S RER++ TL A +NE+ +LL R   +GKGILQ H +I E +++  E 
Sbjct: 1  MANAERVITRVHSQRERLDATLVAQKNEVFALLSRVEAKGKGILQHHQIIAEFEAMPLE- 59

Query: 59 GTRLGLRDGPFGEALKSAQ 77
           T+  L+ G F E L+SAQ
Sbjct: 60 -TQKKLKGGAFFEFLRSAQ 77