Jatropha Genome Database

JcCB0336621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0336621.10 - phase: 0 /partial
         (140 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G19390.3 | Symbols:  | pleckstrin homology (PH) domain-contai...   239   5e-64
AT5G19390.2 | Symbols:  | pleckstrin homology (PH) domain-contai...   239   6e-64
AT5G19390.1 | Symbols:  | pleckstrin homology (PH) domain-contai...   239   6e-64
AT5G19390.4 | Symbols:  | pleckstrin homology (PH) domain-contai...   238   6e-64
AT5G12150.2 | Symbols:  | pleckstrin homology (PH) domain-contai...   221   1e-58
AT5G12150.1 | Symbols:  | pleckstrin homology (PH) domain-contai...   220   2e-58
AT4G24580.1 | Symbols: REN1 | REN1 (ROP1 ENHANCER 1); Rho GTPase...   202   4e-53

>AT5G19390.3 | Symbols:  | pleckstrin homology (PH)
           domain-containing protein / RhoGAP domain-containing
           protein | chr5:6531906-6538069 FORWARD
          Length = 822

 Score =  239 bits (609), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 117/137 (85%), Positives = 127/137 (92%), Gaps = 5/137 (3%)

Query: 4   ALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWK 63
            LPQ+GGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAET EDLYEWK
Sbjct: 58  TLPQKGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETFEDLYEWK 117

Query: 64  TALEHALAQAPSAALVMGHNGIFRSDTNEAIEGSFHQWRDKRPVKSLVVGRPILLALEDI 123
           TALE ALAQAP+AAL+MG NGIFR++TNEAIEG     R+KRP+KSLVVGRPILLALEDI
Sbjct: 118 TALEQALAQAPNAALIMGQNGIFRAETNEAIEG-----REKRPLKSLVVGRPILLALEDI 172

Query: 124 DGGPSFLEKALRFLEKF 140
           DG PSFLEKAL+F+EK+
Sbjct: 173 DGSPSFLEKALQFIEKY 189


>AT5G19390.2 | Symbols:  | pleckstrin homology (PH)
           domain-containing protein / RhoGAP domain-containing
           protein | chr5:6531906-6538206 FORWARD
          Length = 870

 Score =  239 bits (609), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 117/137 (85%), Positives = 127/137 (92%), Gaps = 5/137 (3%)

Query: 4   ALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWK 63
            LPQ+GGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAET EDLYEWK
Sbjct: 58  TLPQKGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETFEDLYEWK 117

Query: 64  TALEHALAQAPSAALVMGHNGIFRSDTNEAIEGSFHQWRDKRPVKSLVVGRPILLALEDI 123
           TALE ALAQAP+AAL+MG NGIFR++TNEAIEG     R+KRP+KSLVVGRPILLALEDI
Sbjct: 118 TALEQALAQAPNAALIMGQNGIFRAETNEAIEG-----REKRPLKSLVVGRPILLALEDI 172

Query: 124 DGGPSFLEKALRFLEKF 140
           DG PSFLEKAL+F+EK+
Sbjct: 173 DGSPSFLEKALQFIEKY 189


>AT5G19390.1 | Symbols:  | pleckstrin homology (PH)
           domain-containing protein / RhoGAP domain-containing
           protein | chr5:6531906-6538206 FORWARD
          Length = 870

 Score =  239 bits (609), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 117/137 (85%), Positives = 127/137 (92%), Gaps = 5/137 (3%)

Query: 4   ALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWK 63
            LPQ+GGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAET EDLYEWK
Sbjct: 58  TLPQKGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETFEDLYEWK 117

Query: 64  TALEHALAQAPSAALVMGHNGIFRSDTNEAIEGSFHQWRDKRPVKSLVVGRPILLALEDI 123
           TALE ALAQAP+AAL+MG NGIFR++TNEAIEG     R+KRP+KSLVVGRPILLALEDI
Sbjct: 118 TALEQALAQAPNAALIMGQNGIFRAETNEAIEG-----REKRPLKSLVVGRPILLALEDI 172

Query: 124 DGGPSFLEKALRFLEKF 140
           DG PSFLEKAL+F+EK+
Sbjct: 173 DGSPSFLEKALQFIEKY 189


>AT5G19390.4 | Symbols:  | pleckstrin homology (PH)
           domain-containing protein / RhoGAP domain-containing
           protein | chr5:6531906-6537143 FORWARD
          Length = 714

 Score =  238 bits (608), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 117/136 (86%), Positives = 127/136 (93%), Gaps = 5/136 (3%)

Query: 5   LPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKT 64
           LPQ+GGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAET EDLYEWKT
Sbjct: 59  LPQKGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETFEDLYEWKT 118

Query: 65  ALEHALAQAPSAALVMGHNGIFRSDTNEAIEGSFHQWRDKRPVKSLVVGRPILLALEDID 124
           ALE ALAQAP+AAL+MG NGIFR++TNEAIEG     R+KRP+KSLVVGRPILLALEDID
Sbjct: 119 ALEQALAQAPNAALIMGQNGIFRAETNEAIEG-----REKRPLKSLVVGRPILLALEDID 173

Query: 125 GGPSFLEKALRFLEKF 140
           G PSFLEKAL+F+EK+
Sbjct: 174 GSPSFLEKALQFIEKY 189


>AT5G12150.2 | Symbols:  | pleckstrin homology (PH)
           domain-containing protein / RhoGAP domain-containing
           protein | chr5:3924632-3930100 REVERSE
          Length = 772

 Score =  221 bits (562), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 113/138 (81%), Positives = 126/138 (91%)

Query: 3   SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEW 62
           SALPQ+GGEVNLTLGGIDLN+SGSVVVREDKKLLTVLFPDGRDGRAFTLKAET +DLYEW
Sbjct: 57  SALPQKGGEVNLTLGGIDLNSSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETLDDLYEW 116

Query: 63  KTALEHALAQAPSAALVMGHNGIFRSDTNEAIEGSFHQWRDKRPVKSLVVGRPILLALED 122
           K ALE ALAQAP+AALV+G NGIFR++ N  IE SF+ WRD+RP+KS VVGRPILLALE+
Sbjct: 117 KAALEQALAQAPNAALVIGQNGIFRTEANNTIEASFNSWRDQRPLKSSVVGRPILLALEE 176

Query: 123 IDGGPSFLEKALRFLEKF 140
           IDG PSFLEKAL+FLE +
Sbjct: 177 IDGSPSFLEKALQFLETY 194


>AT5G12150.1 | Symbols:  | pleckstrin homology (PH)
           domain-containing protein / RhoGAP domain-containing
           protein | chr5:3924393-3930100 REVERSE
          Length = 827

 Score =  220 bits (561), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 113/138 (81%), Positives = 126/138 (91%)

Query: 3   SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEW 62
           SALPQ+GGEVNLTLGGIDLN+SGSVVVREDKKLLTVLFPDGRDGRAFTLKAET +DLYEW
Sbjct: 57  SALPQKGGEVNLTLGGIDLNSSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETLDDLYEW 116

Query: 63  KTALEHALAQAPSAALVMGHNGIFRSDTNEAIEGSFHQWRDKRPVKSLVVGRPILLALED 122
           K ALE ALAQAP+AALV+G NGIFR++ N  IE SF+ WRD+RP+KS VVGRPILLALE+
Sbjct: 117 KAALEQALAQAPNAALVIGQNGIFRTEANNTIEASFNSWRDQRPLKSSVVGRPILLALEE 176

Query: 123 IDGGPSFLEKALRFLEKF 140
           IDG PSFLEKAL+FLE +
Sbjct: 177 IDGSPSFLEKALQFLETY 194


>AT4G24580.1 | Symbols: REN1 | REN1 (ROP1 ENHANCER 1); Rho GTPase
           activator/ Rho GTPase binding / phosphoinositide binding
           | chr4:12687879-12694248 REVERSE
          Length = 939

 Score =  202 bits (515), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 99/136 (72%), Positives = 115/136 (84%), Gaps = 1/136 (0%)

Query: 3   SALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEW 62
           SA+ Q+G EVNLTLGGIDLNNSGSVVV+ DKKLLTVLFPDGRDGRAFTLKA+T EDL+EW
Sbjct: 99  SAVQQKGSEVNLTLGGIDLNNSGSVVVKADKKLLTVLFPDGRDGRAFTLKADTMEDLHEW 158

Query: 63  KTALEHALAQAPSAALVMGHNGIFRSDTNEAIEGSFHQWRDKRPVKSLVVGRPILLALED 122
           K ALE+AL QAPSA+ VMG NGIFR+D  +   G   + +D+ P KS V+GRP+LLALED
Sbjct: 159 KAALENALTQAPSASHVMGQNGIFRNDHADPAVG-VDEKKDETPTKSTVLGRPVLLALED 217

Query: 123 IDGGPSFLEKALRFLE 138
           +DG PSFLEKALRF+E
Sbjct: 218 VDGAPSFLEKALRFVE 233