Jatropha Genome Database

JcCB0333371.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0333371.10 + phase: 0 /short
         (48 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G51840.1 | Symbols: ACX4, ATSCX, ATG6 | ACX4 (ACYL-COA OXIDAS...    61   1e-10

>AT3G51840.1 | Symbols: ACX4, ATSCX, ATG6 | ACX4 (ACYL-COA OXIDASE
          4); acyl-CoA oxidase/ oxidoreductase |
          chr3:19225653-19229008 REVERSE
          Length = 436

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/38 (65%), Positives = 32/38 (84%)

Query: 8  ADLEESAKSSYFNLPPLDVSVAFPQATPASIFPPCSKN 45
          A  E+  KSSYF+LPP+++SVAFPQATPAS FPPC+ +
Sbjct: 10 ASNEKKVKSSYFDLPPMEMSVAFPQATPASTFPPCTSD 47