Jatropha Genome Database

JcCB0331671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0331671.10 - phase: 0 /partial
         (94 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G39930.1 | Symbols: ISA1, ATISA1 | ISA1 (ISOAMYLASE 1); alpha...   164   1e-41
AT4G09020.1 | Symbols: ATISA3, ISA3 | ISA3 (ISOAMYLASE 3); alpha...    92   6e-20
AT1G03310.1 | Symbols: ATISA2, ISA2, DBE1, BE2 | isoamylase, put...    69   5e-13
AT1G03310.2 | Symbols: ATISA2, ISA2, DBE1, BE2 | isoamylase, put...    69   5e-13

>AT2G39930.1 | Symbols: ISA1, ATISA1 | ISA1 (ISOAMYLASE 1);
           alpha-amylase/ isoamylase | chr2:16666078-16672183
           FORWARD
          Length = 783

 Score =  164 bits (415), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 75/91 (82%), Positives = 81/91 (89%)

Query: 4   NETSCGNTFNCNHPIVRQFILDCLRYWVIEMHVDGFRFDLASIMTRGSSLWDAVNVFGNP 63
           N + CGNTFNCNHP+VRQFILDCLRYWV EMHVDGFRFDL SIM+R SSLWDA NV+G  
Sbjct: 372 NYSGCGNTFNCNHPVVRQFILDCLRYWVTEMHVDGFRFDLGSIMSRSSSLWDAANVYGAD 431

Query: 64  VEGDLLTTGTPLSSPPLIDMISNDPILREVK 94
           VEGDLLTTGTP+S PP+IDMISNDPILR VK
Sbjct: 432 VEGDLLTTGTPISCPPVIDMISNDPILRGVK 462


>AT4G09020.1 | Symbols: ATISA3, ISA3 | ISA3 (ISOAMYLASE 3);
           alpha-amylase/ isoamylase | chr4:5784099-5788839 FORWARD
          Length = 764

 Score = 92.0 bits (227), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 45/92 (48%), Positives = 55/92 (59%), Gaps = 19/92 (20%)

Query: 3   LNETSCGNTFNCNHPIVRQFILDCLRYWVIEMHVDGFRFDLASIMTRGSSLWDAVNVFGN 62
           LN + CGNT NCNHP+V + ILD LR+WV E HVDGFRFDLAS++ R             
Sbjct: 389 LNFSGCGNTLNCNHPVVMELILDSLRHWVTEYHVDGFRFDLASVLCRA------------ 436

Query: 63  PVEGDLLTTGTPLSSPPLIDMISNDPILREVK 94
                  T G+PLS+PPLI  I+ D +L   K
Sbjct: 437 -------TDGSPLSAPPLIRAIAKDSVLSRCK 461


>AT1G03310.1 | Symbols: ATISA2, ISA2, DBE1, BE2 | isoamylase,
           putative / starch debranching enzyme, putative |
           chr1:813975-816623 FORWARD
          Length = 882

 Score = 69.3 bits (168), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 19/91 (20%)

Query: 4   NETSCGNTFNCNHPIVRQFILDCLRYWVIEMHVDGFRFDLASIMTRGSSLWDAVNVFGNP 63
           N+    +  NCN+P+V+Q +L+ LRYWV E HVDGF F  AS + RG             
Sbjct: 492 NDLDSKSYLNCNYPVVQQLVLESLRYWVTEFHVDGFCFINASSLLRG------------- 538

Query: 64  VEGDLLTTGTPLSSPPLIDMISNDPILREVK 94
                   G  LS PPL++ I+ DP+L E K
Sbjct: 539 ------VHGEQLSRPPLVEAIAFDPLLAETK 563


>AT1G03310.2 | Symbols: ATISA2, ISA2, DBE1, BE2 | isoamylase,
           putative / starch debranching enzyme, putative |
           chr1:813975-816623 FORWARD
          Length = 882

 Score = 69.3 bits (168), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 19/91 (20%)

Query: 4   NETSCGNTFNCNHPIVRQFILDCLRYWVIEMHVDGFRFDLASIMTRGSSLWDAVNVFGNP 63
           N+    +  NCN+P+V+Q +L+ LRYWV E HVDGF F  AS + RG             
Sbjct: 492 NDLDSKSYLNCNYPVVQQLVLESLRYWVTEFHVDGFCFINASSLLRG------------- 538

Query: 64  VEGDLLTTGTPLSSPPLIDMISNDPILREVK 94
                   G  LS PPL++ I+ DP+L E K
Sbjct: 539 ------VHGEQLSRPPLVEAIAFDPLLAETK 563