Jatropha Genome Database

JcCB0329531.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0329531.10 + phase: 2 /TE/partial
         (839 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   178   1e-44
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   108   1e-23

>AT4G23160.1 | Symbols:  | protein kinase family protein |
           chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  178 bits (452), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/383 (33%), Positives = 194/383 (50%), Gaps = 8/383 (2%)

Query: 433 FLNGFINEEVYVEQPPXFESYE----KPNHVYKLTRALYGLKQAPRAXYERLSKFLLENY 488
           FLNG ++EE+Y++ PP + + +     PN V  L +++YGLKQA R  + + S  L+   
Sbjct: 199 FLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFG 258

Query: 489 FSRGKVSTILFIKNQAPDILVVQVYVDDIIFGSTNNLLXKNFSKIMQGXFKMSMMGELNF 548
           F +       F+K  A   L V VYVDDII  S N+         ++  FK+  +G L +
Sbjct: 259 FVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKY 318

Query: 549 FLGLQIKQCDDRISINQGKYAQELLKKFKMENTKVCSTTMSASLKLEKDENGKDVDIKLF 608
           FLGL+I +    I+I Q KYA +LL +  +   K  S  M  S+       G  VD K +
Sbjct: 319 FLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAY 378

Query: 609 KSIIGSLLYLTGTRPDIHFSVCLCARFQSSPKESHLIVMKRILRYLCGTSNLDLXYSKND 668
           + +IG L+YL  TR DI F+V   ++F  +P+ +H   + +IL Y+ GT    L YS   
Sbjct: 379 RRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQA 438

Query: 669 TFDLIGYSDFDFVGSGVDRNSTSRTYQFLDNALIYWFGKKXTFVALSITKAEYMAARSCV 728
              L  +SD  F      R ST+    FL  +LI W  KK   V+ S  +AEY A     
Sbjct: 439 EMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFAT 498

Query: 729 AQVLCIKQQIADNGLKLEMIPIK-CDNTSAINLIKNLIQHSKTKHIELRHHCICDH-VXK 786
            +++ + Q   +  L L    +  CDNT+AI++  N + H +TKHIE   H + +  V +
Sbjct: 499 DEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQ 558

Query: 787 GDIMVEFILIEKQLADIFTKSLN 809
             +   F   ++Q  D FT+ L+
Sbjct: 559 ATLSYSFQAYDEQ--DGFTEYLS 579


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
           chrM:227709-228431 REVERSE
          Length = 240

 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 114/221 (51%), Gaps = 3/221 (1%)

Query: 512 VYVDDIIFGSTNNLLXKNFSKIMQGXFKMSMMGELNFFLGLQIKQCDDRISINQGKYAQE 571
           +YVDDI+   ++N L       +   F M  +G +++FLG+QIK     + ++Q KYA++
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 572 LLKKFKMENTKVCSTTMSASLKLEKD-ENGKDVDIKLFKSIIGSLLYLTGTRPDIHFSVC 630
           +L    M + K  ST +   LKL       K  D   F+SI+G+L YLT TRPDI ++V 
Sbjct: 65  ILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 122

Query: 631 LCARFQSSPKESHLIVMKRILRYLCGTSNLDLXYSKNDTFDLIGYSDFDFVGSGVDRNST 690
           +  +    P  +   ++KR+LRY+ GT    L   KN   ++  + D D+ G    R ST
Sbjct: 123 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRST 182

Query: 691 SRTYQFLDNALIYWFGKKXTFVALSITKAEYMAARSCVAQV 731
           +    FL   +I W  K+   V+ S T+ EY A     A++
Sbjct: 183 TGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAEL 223