Jatropha Genome Database

JcCB0318551.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0318551.10 - phase: 0 /partial
         (233 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G13430.1 | Symbols: IIL1 | IIL1 (ISOPROPYL MALATE ISOMERASE L...   355   1e-98

>AT4G13430.1 | Symbols: IIL1 | IIL1 (ISOPROPYL MALATE ISOMERASE
           LARGE SUBUNIT 1); 4 iron, 4 sulfur cluster binding /
           hydro-lyase/ lyase | chr4:7804194-7807789 REVERSE
          Length = 509

 Score =  355 bits (911), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 168/201 (83%), Positives = 184/201 (91%), Gaps = 2/201 (0%)

Query: 34  IPKC-RKSISKKIVSVMAPQQSERRPATTGSVKTAMTMTEKILAKASEKPQLSPGENVWV 92
           I +C +KSIS+KIVSVMAPQ+ +R P TTGSVKT MTMTEKILA+ASEK  + PG+N+WV
Sbjct: 33  IHRCQKKSISRKIVSVMAPQK-DRSPGTTGSVKTGMTMTEKILARASEKSLVVPGDNIWV 91

Query: 93  NVDVLMTHDVCGPGSIGIFKKEFGANAKVWDREKIVIIPDHYIFTADERANRNVDILRDF 152
           NVDVLMTHDVCGPG+ GIFK+EFG  AKVWD EKIV+IPDHYIFTAD+RANRNVDI+R+ 
Sbjct: 92  NVDVLMTHDVCGPGAFGIFKREFGEKAKVWDPEKIVVIPDHYIFTADKRANRNVDIMREH 151

Query: 153 CYEQNIKYFYDIKDLSNFKANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQF 212
           C EQNIKYFYDI DL NFKANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQF
Sbjct: 152 CREQNIKYFYDITDLGNFKANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQF 211

Query: 213 ATGIGNTDAGFVLGTGKLLLK 233
           ATGIGNTDAGFVLGTGK+LLK
Sbjct: 212 ATGIGNTDAGFVLGTGKILLK 232