Jatropha Genome Database

JcCB0317451.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0317451.10 - phase: 0 /partial
         (278 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G55090.1 | Symbols:  | carbon-nitrogen hydrolase family prote...   524   e-149

>AT1G55090.1 | Symbols:  | carbon-nitrogen hydrolase family protein
           | chr1:20554857-20558188 FORWARD
          Length = 725

 Score =  524 bits (1350), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 236/278 (84%), Positives = 264/278 (94%)

Query: 1   MRLLKVATCNLNQWAMDFDCNLKNIKESISKAKQAGAVIRLGPELEITGYGCEDHFLELD 60
           MRLLKVATCNLNQWAMDF+ N+KNIK SI++AK AGAVIRLGPELE+TGYGCEDHFLELD
Sbjct: 1   MRLLKVATCNLNQWAMDFESNMKNIKASIAEAKAAGAVIRLGPELEVTGYGCEDHFLELD 60

Query: 61  TVTHAWECLKEILLGDWTDGLLCSFGMPVIKGSERYNCQVLCFNRKILMIRPKMWLANDG 120
           TVTHAWECLKE+LLGDWTD +LCS GMPVIKG+ERYNCQVLC NR+I+MIRPKMWLANDG
Sbjct: 61  TVTHAWECLKELLLGDWTDDILCSIGMPVIKGAERYNCQVLCMNRRIIMIRPKMWLANDG 120

Query: 121 NYRELRWFTAWKQKDQLVDFQLPIEISKAINQDSVPFGYGFIQFLDTAVAAEVCEELFTP 180
           NYRELRWFTAWKQ+++L +FQLPIEIS+A+ Q SVPFGYG+IQF+DTAVAAEVCEELF+P
Sbjct: 121 NYRELRWFTAWKQREELEEFQLPIEISEALEQKSVPFGYGYIQFIDTAVAAEVCEELFSP 180

Query: 181 IPPHAELALNGVEVFMNASGSHHQLRKLDLRIRAFIGATHTRGGVYMYSNQQGCDGARLY 240
           +PPHAELALNGVEVFMNASGSHHQLRKLD+R+ AF+GATH RGGVYMYSNQQGCDG+RLY
Sbjct: 181 LPPHAELALNGVEVFMNASGSHHQLRKLDIRLNAFMGATHARGGVYMYSNQQGCDGSRLY 240

Query: 241 YDGCSCIAVNGEVVAQGSQFSLRDVEVVVAQVDLDAVC 278
           YDGC+CI VNG VVAQGSQFSLRDVEV+++QVDLDAV 
Sbjct: 241 YDGCACIVVNGNVVAQGSQFSLRDVEVIISQVDLDAVA 278