Jatropha Genome Database

JcCB0317061.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0317061.10 - phase: 0 /partial
         (192 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G52560.1 | Symbols: ATUSP | ATUSP (ARABIDOPSIS THALIANA UDP-S...   329   8e-91

>AT5G52560.1 | Symbols: ATUSP | ATUSP (ARABIDOPSIS THALIANA
           UDP-SUGAR PYROPHOSPHORYLASE);
           UTP-monosaccharide-1-phosphate uridylyltransferase/
           UTP:arabinose-1-phosphate uridylyltransferase/
           UTP:galactose-1-phosphate uridylyltransferase/
           UTP:glucose-1-phosphate uridylyltransferase/ UTP:xy |
           chr5:21331230-21334573 FORWARD
          Length = 614

 Score =  329 bits (843), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 151/189 (79%), Positives = 170/189 (89%)

Query: 1   LILELGPYIEELKKTGGAIKEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLPPSARVGF 60
           LILELGPY +EL+KTGGAIKEFVNPKYKD++KT+FKSSTRLECMMQDYPKTLPP+ARVGF
Sbjct: 372 LILELGPYKDELQKTGGAIKEFVNPKYKDSTKTAFKSSTRLECMMQDYPKTLPPTARVGF 431

Query: 61  TVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYRANSLILRKXXXXXXXXXXXX 120
           TVMD WLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYRANSLIL+K            
Sbjct: 432 TVMDIWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYRANSLILQKAGVKVEEPVKQV 491

Query: 121 FNGQEVEVWPRITWKPKWGLTFSDVKRKVSGSCSISQRSTMAIKGRNIFVEDLSLDGALV 180
            NGQEVEVW RITWKPKWG+ FSD+K+KVSG+C +SQRSTMAIKGRN+F++DLSLDGAL+
Sbjct: 492 LNGQEVEVWSRITWKPKWGMIFSDIKKKVSGNCEVSQRSTMAIKGRNVFIKDLSLDGALI 551

Query: 181 IESVDGAEV 189
           ++S+D AEV
Sbjct: 552 VDSIDDAEV 560