Jatropha Genome Database

JcCB0309911.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0309911.10 + phase: 1 /partial
         (248 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G15110.1 | Symbols:  | phosphatidyl serine synthase family pr...   408   e-114
AT1G15110.2 | Symbols:  | phosphatidyl serine synthase family pr...   407   e-114

>AT1G15110.1 | Symbols:  | phosphatidyl serine synthase family
           protein | chr1:5199594-5201908 FORWARD
          Length = 425

 Score =  408 bits (1048), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/229 (84%), Positives = 212/229 (92%), Gaps = 2/229 (0%)

Query: 22  IWASGVLNPESSASGDMETSVKRGVWAMIAVFLAYCLLQAPSTVLIRPHPAIWRLVHGMA 81
           IWASG L+P+S+ S D+ TSVKRGVWAMIAVFLAY LLQAPSTVLIRPHPAIWRLVHGMA
Sbjct: 54  IWASGALDPDSTTSDDLVTSVKRGVWAMIAVFLAYSLLQAPSTVLIRPHPAIWRLVHGMA 113

Query: 82  VVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYMPENPTSRFKNVYDT 141
           V+YLVALTFLLFQ+RDDARQFMKFLHPDLG+ELPE+SYGADCRIY+P++PT+RFKN+YDT
Sbjct: 114 VIYLVALTFLLFQRRDDARQFMKFLHPDLGIELPEKSYGADCRIYVPDHPTNRFKNLYDT 173

Query: 142 LFDEFVLAHIFGWWGKAILLRNQPLLWVLSIGFEFLEFTFRHMLPNFNECWWDSIILDIL 201
           +FDEF LAHIFGWWGKAIL+RNQPLLWVLSIGFE LE TFRHMLPNFNECWWDSI+LDIL
Sbjct: 174 VFDEFFLAHIFGWWGKAILIRNQPLLWVLSIGFELLEVTFRHMLPNFNECWWDSIVLDIL 233

Query: 202 ICNWFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKA--CLKPIFPCHF 248
           ICNWFGIWAGM+TVRYFDGKTYEWVGISRQPNIIGK    L    P H+
Sbjct: 234 ICNWFGIWAGMYTVRYFDGKTYEWVGISRQPNIIGKVKRTLGQFTPAHW 282


>AT1G15110.2 | Symbols:  | phosphatidyl serine synthase family
           protein | chr1:5199594-5201988 FORWARD
          Length = 453

 Score =  407 bits (1046), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 194/228 (85%), Positives = 211/228 (92%), Gaps = 2/228 (0%)

Query: 22  IWASGVLNPESSASGDMETSVKRGVWAMIAVFLAYCLLQAPSTVLIRPHPAIWRLVHGMA 81
           IWASG L+P+S+ S D+ TSVKRGVWAMIAVFLAY LLQAPSTVLIRPHPAIWRLVHGMA
Sbjct: 54  IWASGALDPDSTTSDDLVTSVKRGVWAMIAVFLAYSLLQAPSTVLIRPHPAIWRLVHGMA 113

Query: 82  VVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYMPENPTSRFKNVYDT 141
           V+YLVALTFLLFQ+RDDARQFMKFLHPDLG+ELPE+SYGADCRIY+P++PT+RFKN+YDT
Sbjct: 114 VIYLVALTFLLFQRRDDARQFMKFLHPDLGIELPEKSYGADCRIYVPDHPTNRFKNLYDT 173

Query: 142 LFDEFVLAHIFGWWGKAILLRNQPLLWVLSIGFEFLEFTFRHMLPNFNECWWDSIILDIL 201
           +FDEF LAHIFGWWGKAIL+RNQPLLWVLSIGFE LE TFRHMLPNFNECWWDSI+LDIL
Sbjct: 174 VFDEFFLAHIFGWWGKAILIRNQPLLWVLSIGFELLEVTFRHMLPNFNECWWDSIVLDIL 233

Query: 202 ICNWFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKA--CLKPIFPCH 247
           ICNWFGIWAGM+TVRYFDGKTYEWVGISRQPNIIGK    L    P H
Sbjct: 234 ICNWFGIWAGMYTVRYFDGKTYEWVGISRQPNIIGKVKRTLGQFTPAH 281