Jatropha Genome Database

JcCB0308331.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0308331.10 + phase: 0 /partial
         (60 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |...   125   8e-30
AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RABG3E (RAB GT...   125   8e-30
AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RABG3E (RAB GT...   125   8e-30
AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D | ATRABG3C (ARABIDOPSIS...   112   6e-26
AT1G52280.1 | Symbols: AtRABG3d | AtRABG3d (Arabidopsis Rab GTPa...   111   8e-26
AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RABG3B; G...   105   4e-24
AT4G09720.3 | Symbols: ATRABG3A | Ras-related GTP-binding protei...   102   5e-23
AT4G09720.1 | Symbols: ATRABG3A | Ras-related GTP-binding protei...   101   1e-22
AT2G21880.1 | Symbols: ATRAB7A, ATRABG2 | ATRAB7A; GTP binding |...    90   3e-19
AT2G21880.2 | Symbols: ATRAB7A, ATRABG2 | ATRAB7A; GTP binding |...    89   5e-19
AT5G64990.1 | Symbols: AtRABH1a | AtRABH1a (Arabidopsis Rab GTPa...    60   2e-10
AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | RAB6A; G...    57   2e-09
AT5G39620.1 | Symbols: AtRABG1 | AtRABG1 (Arabidopsis Rab GTPase...    56   6e-09
AT5G10260.1 | Symbols: AtRABH1e | AtRABH1e (Arabidopsis Rab GTPa...    55   1e-08
AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6 | AT...    54   1e-08
AT1G28550.1 | Symbols: AtRABA1i | AtRABA1i (Arabidopsis Rab GTPa...    54   2e-08
AT5G60860.1 | Symbols: AtRABA1f | AtRABA1f (Arabidopsis Rab GTPa...    53   4e-08
AT4G39890.1 | Symbols: AtRABH1c | AtRABH1c (Arabidopsis Rab GTPa...    53   4e-08
AT2G33870.1 | Symbols: ArRABA1h | ArRABA1h (Arabidopsis Rab GTPa...    52   5e-08
AT5G45750.1 | Symbols: AtRABA1c | AtRABA1c (Arabidopsis Rab GTPa...    52   6e-08
AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | ...    52   1e-07
AT4G18430.1 | Symbols: AtRABA1e | AtRABA1e (Arabidopsis Rab GTPa...    51   2e-07
AT3G15060.1 | Symbols: AtRABA1g | AtRABA1g (Arabidopsis Rab GTPa...    50   2e-07
AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A | ...    50   3e-07
AT2G31680.1 | Symbols: AtRABA5d | AtRABA5d (Arabidopsis Rab GTPa...    50   4e-07
AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3 | ATRABA3 (ARABIDOPSIS ...    50   4e-07
AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D | ATRABA1D (A...    49   4e-07
AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D | ATRABA2D (HOARABIDO...    49   7e-07
AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 | ARA-2; ...    49   7e-07
AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B | ATRABA2B (...    48   1e-06
AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C | ...    47   2e-06
AT1G16920.1 | Symbols: RAB11, ATRABA1B | ATRABA1B (ARABIDOPSIS R...    47   2e-06
AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C | ATGB2 (GTP-BIN...    46   5e-06
AT3G07410.1 | Symbols: AtRABA5b | AtRABA5b (Arabidopsis Rab GTPa...    46   5e-06
AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |...    46   5e-06
AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | ARA6; GTP...    46   5e-06
AT3G54840.2 | Symbols: ARA6, RABF1 | ARA6; GTP binding / GTPase ...    46   6e-06
AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RABA4D (RAB GTPASE HOM...    45   7e-06
AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RABA4...    45   1e-05

>AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |
          ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F); GTP
          binding | chr3:6484266-6486005 FORWARD
          Length = 206

 Score =  125 bits (313), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 60/60 (100%), Positives = 60/60 (100%)

Query: 1  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60


>AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RABG3E (RAB
          GTPASE HOMOLOG G3E); GTP binding |
          chr1:18234842-18236968 FORWARD
          Length = 206

 Score =  125 bits (313), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 60/60 (100%), Positives = 60/60 (100%)

Query: 1  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60


>AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RABG3E (RAB
          GTPASE HOMOLOG G3E); GTP binding |
          chr1:18234842-18236968 FORWARD
          Length = 206

 Score =  125 bits (313), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 60/60 (100%), Positives = 60/60 (100%)

Query: 1  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60


>AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D | ATRABG3C (ARABIDOPSIS
          RAB GTPASE HOMOLOG G3C); GTP binding |
          chr3:5459270-5460556 FORWARD
          Length = 206

 Score =  112 bits (279), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 53/60 (88%), Positives = 57/60 (95%)

Query: 1  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          M SRRR LLKVIILGDSGVGKTSLMNQ+VN+KFSNQYKATIGADFLTKEVQ +DR+FTLQ
Sbjct: 1  MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60


>AT1G52280.1 | Symbols: AtRABG3d | AtRABG3d (Arabidopsis Rab
          GTPase homolog G3d); GTP binding |
          chr1:19468150-19469449 REVERSE
          Length = 206

 Score =  111 bits (278), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 53/60 (88%), Positives = 57/60 (95%)

Query: 1  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          M SRRR LLKVIILGDSGVGKTSLMNQ+VN+KFSNQYKATIGADFLTKEVQ +DR+FTLQ
Sbjct: 1  MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60


>AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RABG3B;
          GTP binding | chr1:8049247-8050494 FORWARD
          Length = 203

 Score =  105 bits (263), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 51/60 (85%), Positives = 55/60 (91%)

Query: 1  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          M +RRRTLLKVIILGDSGVGKTSLMNQYVN KFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1  MSTRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60


>AT4G09720.3 | Symbols: ATRABG3A | Ras-related GTP-binding
          protein, putative | chr4:6133101-6134959 FORWARD
          Length = 217

 Score =  102 bits (254), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 48/60 (80%), Positives = 55/60 (91%)

Query: 1  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          M +RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q  ++L TLQ
Sbjct: 1  MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60


>AT4G09720.1 | Symbols: ATRABG3A | Ras-related GTP-binding
          protein, putative | chr4:6133101-6134959 FORWARD
          Length = 206

 Score =  101 bits (251), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/60 (80%), Positives = 55/60 (91%)

Query: 1  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          M +RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q  ++L TLQ
Sbjct: 1  MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60


>AT2G21880.1 | Symbols: ATRAB7A, ATRABG2 | ATRAB7A; GTP binding |
          chr2:9324899-9326170 REVERSE
          Length = 212

 Score = 89.7 bits (221), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/57 (73%), Positives = 50/57 (87%)

Query: 4  RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          + RTLLKVI+LGDSGVGKTSLMNQYV KKF+ QYKATIGADF+TKE+  +++  TLQ
Sbjct: 5  KNRTLLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQ 61


>AT2G21880.2 | Symbols: ATRAB7A, ATRABG2 | ATRAB7A; GTP binding |
          chr2:9324899-9326170 REVERSE
          Length = 204

 Score = 89.4 bits (220), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/57 (73%), Positives = 50/57 (87%)

Query: 4  RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          + RTLLKVI+LGDSGVGKTSLMNQYV KKF+ QYKATIGADF+TKE+  +++  TLQ
Sbjct: 5  KNRTLLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQ 61


>AT5G64990.1 | Symbols: AtRABH1a | AtRABH1a (Arabidopsis Rab
          GTPase homolog H1a); GTP binding |
          chr5:25963562-25964792 REVERSE
          Length = 206

 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 37/51 (72%)

Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          K++ LGD GVGKTS++  ++  KF   Y+ATIG DFL+K  ++EDR F LQ
Sbjct: 9  KLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQ 59


>AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | RAB6A;
          GTP binding / protein binding | chr2:18411778-18413883
          REVERSE
          Length = 208

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 36/51 (70%)

Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          K++ LGD  VGKTS++ +++  KF N Y+ATIG DFL+K +  EDR   LQ
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61


>AT5G39620.1 | Symbols: AtRABG1 | AtRABG1 (Arabidopsis Rab GTPase
          homolog G1); GTP binding | chr5:15864166-15865782
          REVERSE
          Length = 204

 Score = 55.8 bits (133), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 38/55 (69%)

Query: 6  RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          +T LK+I+LGDSGVGKTSL+ +Y +K F   + +TI  D +TKE+   +R   LQ
Sbjct: 3  KTKLKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQ 57


>AT5G10260.1 | Symbols: AtRABH1e | AtRABH1e (Arabidopsis Rab
          GTPase homolog H1e); GTP binding | chr5:3219991-3221301
          FORWARD
          Length = 207

 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%)

Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          K++ LGD  VGKTS++ +++  KF   Y+ATIG DFL+K +  EDR   LQ
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61


>AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6 |
          ATRABH1D (ARABIDOPSIS RAB GTPASE HOMOLOG H1D); GTP
          binding | chr2:9466568-9467688 FORWARD
          Length = 207

 Score = 54.3 bits (129), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%)

Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          K++ LGD  VGKTS++ +++  KF   Y+ATIG DFL+K +  EDR   LQ
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61


>AT1G28550.1 | Symbols: AtRABA1i | AtRABA1i (Arabidopsis Rab
          GTPase homolog A1i); GTP binding |
          chr1:10036966-10037698 REVERSE
          Length = 218

 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 38/53 (71%)

Query: 8  LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          L KV++ GDSGVGK++L++++    FS+  +ATIG +F T+ +Q +D++   Q
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQ 65


>AT5G60860.1 | Symbols: AtRABA1f | AtRABA1f (Arabidopsis Rab
          GTPase homolog A1f); GTP binding |
          chr5:24484750-24485565 FORWARD
          Length = 217

 Score = 52.8 bits (125), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/53 (39%), Positives = 39/53 (73%)

Query: 8  LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          L KV+++GDSGVGK++L++++   +FS + K+TIG +F T+ +  +D++   Q
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQ 65


>AT4G39890.1 | Symbols: AtRABH1c | AtRABH1c (Arabidopsis Rab
          GTPase homolog H1c); GTP binding / protein binding |
          chr4:18506112-18507459 FORWARD
          Length = 214

 Score = 52.8 bits (125), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 34/52 (65%)

Query: 9  LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           K++ LGD  VGKTS++ +++  KF   Y+ TIG DFL+K +  EDR   LQ
Sbjct: 10 FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQ 61


>AT2G33870.1 | Symbols: ArRABA1h | ArRABA1h (Arabidopsis Rab
          GTPase homolog A1h); GTP binding |
          chr2:14337366-14338251 REVERSE
          Length = 218

 Score = 52.4 bits (124), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/53 (39%), Positives = 38/53 (71%)

Query: 8  LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          L KV++ GDSGVGK++L++++    FS+  ++TIG +F T+ +Q +D++   Q
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQ 65


>AT5G45750.1 | Symbols: AtRABA1c | AtRABA1c (Arabidopsis Rab
          GTPase homolog A1c); GTP binding |
          chr5:18559318-18560639 FORWARD
          Length = 216

 Score = 52.4 bits (124), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/53 (39%), Positives = 39/53 (73%)

Query: 8  LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          L KV+++GDSGVGK++L++++   +FS + K+TIG +F T+ +  +D++   Q
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQ 65


>AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E |
           RABA5E (RAB GTPASE HOMOLOG A5E); GTP binding |
           chr1:1748314-1749350 FORWARD
          Length = 261

 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 37/57 (64%)

Query: 4   RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
           R   L K++++GDS VGK++L+++Y   +FS   KATIG +F T+ ++ E +    Q
Sbjct: 51  REEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQ 107


>AT4G18430.1 | Symbols: AtRABA1e | AtRABA1e (Arabidopsis Rab
          GTPase homolog A1e); GTP binding |
          chr4:10183903-10185223 REVERSE
          Length = 217

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 39/53 (73%)

Query: 8  LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          L K++++GDSGVGK++L++++   +FS + K+TIG +F T+ V  ++++   Q
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQ 65


>AT3G15060.1 | Symbols: AtRABA1g | AtRABA1g (Arabidopsis Rab
          GTPase homolog A1g); GTP binding | chr3:5069239-5070025
          FORWARD
          Length = 217

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 39/53 (73%)

Query: 8  LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          L KV+++GDSGVGK++L++++   +FS + K+TIG +F T+ +  ++++   Q
Sbjct: 13 LYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQ 65


>AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A |
          ATRAB11C (ARABIDOPSIS RAB GTPASE 11C); GTP binding |
          chr1:3118350-3119571 REVERSE
          Length = 217

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 37/53 (69%)

Query: 8  LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          L KV+++GDSGVGK++L++++   +F  + K+TIG +F T+ +Q E R    Q
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64


>AT2G31680.1 | Symbols: AtRABA5d | AtRABA5d (Arabidopsis Rab
          GTPase homolog A5d); GTP binding |
          chr2:13473781-13474957 REVERSE
          Length = 219

 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 36/53 (67%)

Query: 8  LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          L K++I+GDS VGK++L+++Y   +F+   KATIG +F T+ ++ E +    Q
Sbjct: 12 LFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQ 64


>AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3 | ATRABA3 (ARABIDOPSIS
          RAB GTPASE HOMOLOG A3); GTP binding | chr1:86715-88145
          REVERSE
          Length = 237

 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 37/60 (61%)

Query: 1  MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          MP +   + KV+++GDS VGKT L++++ + +F    K+TIG +F T+ +    +L   Q
Sbjct: 21 MPEKIDYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQ 80


>AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D | ATRABA1D
          (ARABIDOPSIS RAB GTPASE HOMOLOG A1D); GTP binding |
          chr4:10320156-10321339 REVERSE
          Length = 214

 Score = 49.3 bits (116), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 38/53 (71%)

Query: 8  LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          L KV+++GDSGVGK++L++++   +FS + K+TIG +F T+ +   +++   Q
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQ 65


>AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D | ATRABA2D
          (HOARABIDOPSIS RAB GTPASE HOMOLOG A2D); GTP binding |
          chr5:23876858-23878244 FORWARD
          Length = 217

 Score = 48.9 bits (115), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 37/53 (69%)

Query: 8  LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          L K++++GDSGVGKT++++++   +F  + K+TIG +F T+ +Q E +    Q
Sbjct: 12 LFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64


>AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 | ARA-2;
          GTP binding | chr1:1951089-1952686 REVERSE
          Length = 216

 Score = 48.9 bits (115), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 38/53 (71%)

Query: 8  LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          L K++++GDSGVGK++L++++   +F+ + K+TIG +F TK  + E ++   Q
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQ 65


>AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B | ATRABA2B
          (ARABIDOPSIS RAB GTPASE HOMOLOG A2B); GTP binding /
          GTPase/ protein binding | chr1:2276270-2277154 FORWARD
          Length = 214

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 37/53 (69%)

Query: 8  LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          L K++++GDSGVGK+++++++   +F  + K+TIG +F T+ +Q E +    Q
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64


>AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C |
          ATRABA2C (ARABIDOPSIS RAB GTPASE HOMOLOG A2C); GTP
          binding | chr3:17246699-17248362 REVERSE
          Length = 217

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 36/53 (67%)

Query: 8  LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          L K++++GDSGVGK+++++++   +F  + K+TIG +F T+  Q E +    Q
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQ 64


>AT1G16920.1 | Symbols: RAB11, ATRABA1B | ATRABA1B (ARABIDOPSIS
          RAB GTPASE HOMOLOG A1B); GTP binding |
          chr1:5787489-5789147 REVERSE
          Length = 216

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 39/53 (73%)

Query: 8  LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          L KV+++GDSGVGK++L++++   +F+ + K+TIG +F T+ ++ + ++   Q
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQ 65


>AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C | ATGB2
          (GTP-BINDING 2); GTP binding | chr4:16987118-16988839
          REVERSE
          Length = 211

 Score = 45.8 bits (107), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 33/53 (62%)

Query: 8  LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          L K II+GD+GVGK+ L+ Q+ +K+F   +  TIG +F  + V  + R   LQ
Sbjct: 6  LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQ 58


>AT3G07410.1 | Symbols: AtRABA5b | AtRABA5b (Arabidopsis Rab
          GTPase homolog A5b); GTP binding | chr3:2372485-2373482
          REVERSE
          Length = 217

 Score = 45.8 bits (107), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/48 (39%), Positives = 34/48 (70%)

Query: 8  LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR 55
          L K++++GDS VGK++L++++   +F    KATIG +F T+ V+ E +
Sbjct: 12 LFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGK 59


>AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |
          ARA4; GTP binding / GTPase/ protein binding |
          chr2:17929899-17930904 REVERSE
          Length = 214

 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 30/41 (73%)

Query: 8  LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTK 48
          L K++I+GDS VGK++L+ +Y   +F+   KATIG +F T+
Sbjct: 12 LFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQ 52


>AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | ARA6; GTP
          binding / GTPase | chr3:20318597-20320782 FORWARD
          Length = 202

 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 38/55 (69%), Gaps = 1/55 (1%)

Query: 1  MPSRRRTL-LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED 54
          +P+  + L +K+++LGDSGVGK+ ++ ++V  +F    K T+GA FL++ +  +D
Sbjct: 25 VPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQD 79


>AT3G54840.2 | Symbols: ARA6, RABF1 | ARA6; GTP binding / GTPase |
          chr3:20318597-20320737 FORWARD
          Length = 193

 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 38/55 (69%), Gaps = 1/55 (1%)

Query: 1  MPSRRRTL-LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED 54
          +P+  + L +K+++LGDSGVGK+ ++ ++V  +F    K T+GA FL++ +  +D
Sbjct: 25 VPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQD 79


>AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RABA4D (RAB GTPASE
          HOMOLOG A4D); GTP binding | chr3:3879495-3880437
          REVERSE
          Length = 222

 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%)

Query: 8  LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          + KV+++GDS VGKT L+ ++   +FS   KATIG +F TK +  +++    Q
Sbjct: 15 VFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQ 67


>AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RABA4B
          (RAB GTPASE HOMOLOG A4B); GTP binding |
          chr4:18542722-18543779 FORWARD
          Length = 224

 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 33/53 (62%)

Query: 8  LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
          + KV+++GDS VGK+ L+ ++   +FS   KATIG +F T+ +  E +    Q
Sbjct: 17 VFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQ 69