Jatropha Genome Database
- JcCB0304921.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0304921.10 + phase: 2 /partial
(92 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G22900.1 | Symbols: | galactosyl transferase GMA12/MNN10 fam... 132 4e-32
AT4G37690.1 | Symbols: | galactosyl transferase GMA12/MNN10 fam... 115 4e-27
AT1G18690.1 | Symbols: | transferase/ transferase, transferring... 69 5e-13
AT5G07720.1 | Symbols: | galactosyl transferase GMA12/MNN10 fam... 65 1e-11
AT1G74380.1 | Symbols: XXT5 | XXT5 (XYLOGLUCAN XYLOSYLTRANSFERAS... 65 1e-11
AT4G02500.1 | Symbols: ATXT2, XXT2, XT2 | XT2 (UDP-XYLOSYLTRANSF... 59 8e-10
AT3G62720.2 | Symbols: ATXT1, XT1, XXT1 | XT1 (XYLOSYLTRANSFERAS... 56 4e-09
AT3G62720.1 | Symbols: ATXT1, XT1, XXT1 | XT1 (XYLOSYLTRANSFERAS... 56 4e-09
>AT2G22900.1 | Symbols: | galactosyl transferase GMA12/MNN10 family
protein | chr2:9744359-9746193 REVERSE
Length = 449
Score = 132 bits (332), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
Query: 2 SSFTREPHLREAGNGKGSWRRPFITHFTGCQPCSGDHNKMYEGDSCWKGMVKALNFADNQ 61
++F E L+ GKGS RRPF+THFTGCQPCSGDHNKMY+GD+CW GM+KA+NFADNQ
Sbjct: 360 AAFREERFLKGERGGKGSKRRPFVTHFTGCQPCSGDHNKMYDGDTCWNGMIKAINFADNQ 419
Query: 62 VLRKYGFVHPDLLDSKTVVETPFDYPEEGPW 92
V+RKYGFVH DL + + PFDYP+E PW
Sbjct: 420 VMRKYGFVHSDLGKTSPLQPVPFDYPDE-PW 449
>AT4G37690.1 | Symbols: | galactosyl transferase GMA12/MNN10 family
protein | chr4:17708303-17709601 FORWARD
Length = 432
Score = 115 bits (289), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 63/88 (71%)
Query: 3 SFTREPHLREAGNGKGSWRRPFITHFTGCQPCSGDHNKMYEGDSCWKGMVKALNFADNQV 62
+F E L+ G+GS RR FITHFTGCQPCSGDHN Y+GD+CW M++ALNFADNQV
Sbjct: 344 AFREERFLKGEFGGRGSRRRAFITHFTGCQPCSGDHNPSYDGDTCWNEMIRALNFADNQV 403
Query: 63 LRKYGFVHPDLLDSKTVVETPFDYPEEG 90
+R YG+VH DL + + PFDYP E
Sbjct: 404 MRVYGYVHSDLSKTSPLQPLPFDYPNEA 431
>AT1G18690.1 | Symbols: | transferase/ transferase, transferring
glycosyl groups | chr1:6435153-6436694 FORWARD
Length = 513
Score = 68.9 bits (167), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 16 GKGSWRRPFITHFTGCQPCSGDHNKMYEGDSCWKGMVKALNFADNQVLRKYGFVHPDLLD 75
G G R PF+THF GC+PC + Y D C+K M +A NFADNQVL+ YGF H LL
Sbjct: 425 GLGDERWPFVTHFVGCKPCGSYAD--YAVDRCFKSMERAFNFADNQVLKLYGFSHRGLLS 482
Query: 76 SK 77
K
Sbjct: 483 PK 484
>AT5G07720.1 | Symbols: | galactosyl transferase GMA12/MNN10 family
protein | chr5:2455757-2457130 FORWARD
Length = 457
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 16 GKGSWRRPFITHFTGCQPCSGDHNKMYEGDSCWKGMVKALNFADNQVLRKYGFVHPDLLD 75
G G R PFITHF GC+PC + Y + C K M +A NFADNQVL+ YGF H LL
Sbjct: 366 GLGDERWPFITHFVGCKPCGSYAD--YAVERCLKSMERAFNFADNQVLKLYGFGHRGLLS 423
Query: 76 SKT 78
K
Sbjct: 424 PKI 426
>AT1G74380.1 | Symbols: XXT5 | XXT5 (XYLOGLUCAN XYLOSYLTRANSFERASE
5); transferase/ transferase, transferring glycosyl
groups / xyloglucan 6-xylosyltransferase |
chr1:27959848-27961221 FORWARD
Length = 457
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 16 GKGSWRRPFITHFTGCQPCSGDHNKMYEGDSCWKGMVKALNFADNQVLRKYGFVHPDLLD 75
G G R PF+THF GC+PC + Y + C K M +A NFADNQVL+ YGF H LL
Sbjct: 367 GLGDERWPFVTHFVGCKPCGSYAD--YAVERCLKSMERAFNFADNQVLKLYGFSHRGLLS 424
Query: 76 SKT 78
K
Sbjct: 425 PKI 427
>AT4G02500.1 | Symbols: ATXT2, XXT2, XT2 | XT2
(UDP-XYLOSYLTRANSFERASE 2); UDP-xylosyltransferase/
transferase/ transferase, transferring glycosyl groups /
xyloglucan 6-xylosyltransferase | chr4:1101638-1103345
FORWARD
Length = 461
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 16 GKGSWRRPFITHFTGCQPCS--GDHNKMYEGDSCWKGMVKALNFADNQVLRKYGFVHPDL 73
G G R P +THF GC+PC GD Y + C K M +A NF DNQ+L+ YGF H L
Sbjct: 367 GLGDHRWPLVTHFVGCKPCGKFGD----YPVERCLKQMDRAFNFGDNQILQIYGFTHKSL 422
Query: 74 LDSKT 78
K
Sbjct: 423 ASRKV 427
>AT3G62720.2 | Symbols: ATXT1, XT1, XXT1 | XT1 (XYLOSYLTRANSFERASE
1); UDP-xylosyltransferase/ transferase/ transferase,
transferring glycosyl groups / xyloglucan
6-xylosyltransferase | chr3:23201326-23202708 FORWARD
Length = 460
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 16 GKGSWRRPFITHFTGCQPCS--GDHNKMYEGDSCWKGMVKALNFADNQVLRKYGFVHPDL 73
G G R P +THF GC+PC GD Y + C + M +A NF DNQ+L+ YGF H L
Sbjct: 366 GFGDHRWPLVTHFVGCKPCGKFGD----YPVERCLRQMDRAFNFGDNQILQMYGFTHKSL 421
>AT3G62720.1 | Symbols: ATXT1, XT1, XXT1 | XT1 (XYLOSYLTRANSFERASE
1); UDP-xylosyltransferase/ transferase/ transferase,
transferring glycosyl groups / xyloglucan
6-xylosyltransferase | chr3:23201326-23202708 FORWARD
Length = 460
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 16 GKGSWRRPFITHFTGCQPCS--GDHNKMYEGDSCWKGMVKALNFADNQVLRKYGFVHPDL 73
G G R P +THF GC+PC GD Y + C + M +A NF DNQ+L+ YGF H L
Sbjct: 366 GFGDHRWPLVTHFVGCKPCGKFGD----YPVERCLRQMDRAFNFGDNQILQMYGFTHKSL 421