Jatropha Genome Database

JcCB0302671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0302671.10 - phase: 0 /pseudo/partial
         (197 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G31230.1 | Symbols: AK-HSDH I, AK-HSDH | AK-HSDH I (ASPARTATE...   153   7e-38
AT4G19710.2 | Symbols: AK-HSDH II, AK-HSDH | bifunctional aspart...   151   3e-37
AT4G19710.1 | Symbols: AK-HSDH II, AK-HSDH | bifunctional aspart...   151   3e-37
AT5G13280.1 | Symbols: AK-LYS1, AK1, AK | AK-LYS1 (ASPARTATE KIN...    47   6e-06

>AT1G31230.1 | Symbols: AK-HSDH I, AK-HSDH | AK-HSDH I (ASPARTATE
           KINASE-HOMOSERINE DEHYDROGENASE I); aspartate kinase/
           homoserine dehydrogenase | chr1:11158744-11163055
           REVERSE
          Length = 911

 Score =  153 bits (386), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 79/153 (51%), Positives = 99/153 (64%)

Query: 45  YGLCFRIGFVSQWGRRESACIYVSSSVKAVLLDESKEKAYLSKGGMWSVHKFGGTCVGSS 104
           +G   R   + Q  R E     V  SV  + LD S E  +L KG  W+VHKFGGTCVG+S
Sbjct: 38  FGKLRRRSCIGQCVRSELQSPRVLGSVTDLALDNSVENGHLPKGDSWAVHKFGGTCVGNS 97

Query: 105 ERIKNVAEIIVNDGSEGKLVVVSALSKVTDMLYDLIYKAQSRDDSYIAAADAVFEKHKXX 164
           ERIK+VA ++V D SE KLVVVSA+SKVTDM+YDLI++A+SRDDSY++A   V EKH+  
Sbjct: 98  ERIKDVAAVVVKDDSERKLVVVSAMSKVTDMMYDLIHRAESRDDSYLSALSGVLEKHRAT 157

Query: 165 XXXXXXXXXXXXXXXQLQHDVNNLKAMLRAIFI 197
                          +L  D+NNLKAMLRAI+I
Sbjct: 158 AVDLLDGDELSSFLARLNDDINNLKAMLRAIYI 190


>AT4G19710.2 | Symbols: AK-HSDH II, AK-HSDH | bifunctional aspartate
           kinase/homoserine dehydrogenase, putative / AK-HSDH,
           putative | chr4:10725229-10729536 FORWARD
          Length = 916

 Score =  151 bits (381), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 71/117 (60%), Positives = 89/117 (76%)

Query: 81  EKAYLSKGGMWSVHKFGGTCVGSSERIKNVAEIIVNDGSEGKLVVVSALSKVTDMLYDLI 140
           ++  + KG MWSVHKFGGTCVG+S+RI+NVAE+I+ND SE KLVVVSA+SKVTDM+YDLI
Sbjct: 79  DQVQIPKGEMWSVHKFGGTCVGNSQRIRNVAEVIINDNSERKLVVVSAMSKVTDMMYDLI 138

Query: 141 YKAQSRDDSYIAAADAVFEKHKXXXXXXXXXXXXXXXXXQLQHDVNNLKAMLRAIFI 197
            KAQSRDDSY++A +AV EKH+                  L +D++NLKAMLRAI+I
Sbjct: 139 RKAQSRDDSYLSALEAVLEKHRLTARDLLDGDDLASFLSHLHNDISNLKAMLRAIYI 195


>AT4G19710.1 | Symbols: AK-HSDH II, AK-HSDH | bifunctional aspartate
           kinase/homoserine dehydrogenase, putative / AK-HSDH,
           putative | chr4:10725229-10729278 FORWARD
          Length = 859

 Score =  151 bits (381), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 71/117 (60%), Positives = 89/117 (76%)

Query: 81  EKAYLSKGGMWSVHKFGGTCVGSSERIKNVAEIIVNDGSEGKLVVVSALSKVTDMLYDLI 140
           ++  + KG MWSVHKFGGTCVG+S+RI+NVAE+I+ND SE KLVVVSA+SKVTDM+YDLI
Sbjct: 79  DQVQIPKGEMWSVHKFGGTCVGNSQRIRNVAEVIINDNSERKLVVVSAMSKVTDMMYDLI 138

Query: 141 YKAQSRDDSYIAAADAVFEKHKXXXXXXXXXXXXXXXXXQLQHDVNNLKAMLRAIFI 197
            KAQSRDDSY++A +AV EKH+                  L +D++NLKAMLRAI+I
Sbjct: 139 RKAQSRDDSYLSALEAVLEKHRLTARDLLDGDDLASFLSHLHNDISNLKAMLRAIYI 195


>AT5G13280.1 | Symbols: AK-LYS1, AK1, AK | AK-LYS1 (ASPARTATE KINASE
           1); aspartate kinase | chr5:4249516-4252654 FORWARD
          Length = 569

 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 3/68 (4%)

Query: 71  VKAVLLDESKEKAY--LSKGGMWSVHKFGGTCVGSSERIKNVAEIIVNDGSEGKLVVVSA 128
           V+AVL +E K +A   + + G+  V KFGG+ V S+ER+K VA++I+    E  ++V+SA
Sbjct: 66  VRAVL-EEKKTEAITEVDEKGITCVMKFGGSSVASAERMKEVADLILTFPEESPVIVLSA 124

Query: 129 LSKVTDML 136
           + K T+ L
Sbjct: 125 MGKTTNNL 132