Jatropha Genome Database

JcCB0295761.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0295761.10 - phase: 2 /partial
         (172 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G22200.1 | Symbols: POP2, GABA-T, HER1 | POP2 (POLLEN-PISTIL ...   218   1e-57
AT1G80600.1 | Symbols: WIN1 | WIN1 (HOPW1-1-INTERACTING 1); N2-a...    48   3e-06

>AT3G22200.1 | Symbols: POP2, GABA-T, HER1 | POP2 (POLLEN-PISTIL
           INCOMPATIBILITY 2); 4-aminobutyrate transaminase/
           4-aminobutyrate:pyruvate transaminase |
           chr3:7835286-7838863 FORWARD
          Length = 504

 Score =  218 bits (555), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 105/134 (78%), Positives = 119/134 (88%), Gaps = 2/134 (1%)

Query: 3   VLDINSFVSGSFSHGFTYSGHPVSCAVAIEALKIYKYGENIPEQVSKIAPKFQDGLKAF- 61
           V++ +S   G FSHGFTYSGHPVSCAVAIEALKIYK   NIPE V+K+AP+FQDG+KAF 
Sbjct: 348 VINSHSSKLGVFSHGFTYSGHPVSCAVAIEALKIYKE-RNIPEYVAKVAPRFQDGVKAFA 406

Query: 62  SDSPIIGEIRGTGLILGTEFTDNKSPNDPFPPEWGVGAYFGAQCEKHGMLVRVAGDNIMM 121
           S SPIIGE RGTGLILGTEF DNKSPN+PFPPEWGVGA+FGA+C+KHGMLVRVAGD I+M
Sbjct: 407 SGSPIIGETRGTGLILGTEFVDNKSPNEPFPPEWGVGAFFGAECQKHGMLVRVAGDGILM 466

Query: 122 SPPLTISPEEVDEV 135
           SPPL ISPEE+DE+
Sbjct: 467 SPPLIISPEEIDEL 480


>AT1G80600.1 | Symbols: WIN1 | WIN1 (HOPW1-1-INTERACTING 1);
           N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase/
           catalytic/ pyridoxal phosphate binding / transaminase |
           chr1:30298675-30300513 REVERSE
          Length = 457

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 27/133 (20%)

Query: 16  HGFTYSGHPVSCAVAIEAL-KIYKYGENIPEQVSKIAPK---FQDGL-KAFSDSPIIGEI 70
           HG T++G P+ C+ AI  + K+ K     P  +S ++ K   F+D L K    +  + E+
Sbjct: 337 HGSTFAGSPLVCSAAIAVMDKVSK-----PSFLSSVSNKGRYFRDLLVKKLGGNSHVKEV 391

Query: 71  RGTGLILGTEFTDNKSPNDPFPPEWGVGAYFGAQCEKHGMLVRVAGDN--IMMSPPLTIS 128
           RG GLI+G E           P    V A     C   G+L+  AG    + + PPL IS
Sbjct: 392 RGEGLIIGVELD--------VPASSLVDA-----CRDSGLLILTAGKGNVVRIVPPLVIS 438

Query: 129 PEEVDEVRFVAIL 141
            EE++  R V I+
Sbjct: 439 EEEIE--RAVEIM 449