Jatropha Genome Database

JcCB0293691.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0293691.10 - phase: 0 /partial
         (124 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G80600.1 | Symbols: WIN1 | WIN1 (HOPW1-1-INTERACTING 1); N2-a...   144   1e-35
AT4G39660.1 | Symbols: AGT2 | AGT2 (ALANINE:GLYOXYLATE AMINOTRAN...    60   3e-10
AT5G46180.1 | Symbols: DELTA-OAT | delta-OAT; ornithine-oxo-acid...    51   2e-07
AT2G38400.1 | Symbols: AGT3 | AGT3 (ALANINE:GLYOXYLATE AMINOTRAN...    49   1e-06
AT3G22200.1 | Symbols: POP2, GABA-T, HER1 | POP2 (POLLEN-PISTIL ...    46   7e-06

>AT1G80600.1 | Symbols: WIN1 | WIN1 (HOPW1-1-INTERACTING 1);
           N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase/
           catalytic/ pyridoxal phosphate binding / transaminase |
           chr1:30298675-30300513 REVERSE
          Length = 457

 Score =  144 bits (363), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 66/85 (77%), Positives = 78/85 (91%), Gaps = 1/85 (1%)

Query: 40  SVKLNLKSKEVMEIEAKVLVGTYARNPLVLSSGKGCKLYDPEGREYLDCTSGIAVNALGH 99
           SVK ++ S++V+E EAKV+VGTYAR P+VLSSGKGCKL+DPEG+EYLDC SGIAVNALGH
Sbjct: 52  SVKASV-SQKVIEEEAKVIVGTYARAPVVLSSGKGCKLFDPEGKEYLDCASGIAVNALGH 110

Query: 100 GDPDWVRAVTEQANLLTHVSNVYYS 124
           GDPDW+RAVTEQA +L HVSNVYY+
Sbjct: 111 GDPDWLRAVTEQAGVLAHVSNVYYT 135


>AT4G39660.1 | Symbols: AGT2 | AGT2 (ALANINE:GLYOXYLATE
           AMINOTRANSFERASE 2); alanine-glyoxylate transaminase/
           catalytic/ pyridoxal phosphate binding / transaminase |
           chr4:18406797-18409262 FORWARD
          Length = 476

 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 20/110 (18%)

Query: 16  PPAVDLPRSFKTRACLNVDVQTTNSVKLNLKSKEVMEIEAKVL---VGTYARNPLVLSSG 72
           PP V  PR +K  +                 + EV++   K L   +  Y + PL +  G
Sbjct: 42  PPFVHQPRPYKGPS-----------------ADEVLQKRKKFLGPSLFHYYQKPLNIVEG 84

Query: 73  KGCKLYDPEGREYLDCTSGIAVNALGHGDPDWVRAVTEQANLLTHVSNVY 122
           K   LYD  GR YLD  +GI   + GH  PD + A+TEQ+ LL H + +Y
Sbjct: 85  KMQYLYDESGRRYLDAFAGIVTVSCGHCHPDILNAITEQSKLLQHATTIY 134


>AT5G46180.1 | Symbols: DELTA-OAT | delta-OAT; ornithine-oxo-acid
           transaminase | chr5:18718766-18721271 REVERSE
          Length = 475

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%)

Query: 50  VMEIEAKVLVGTYARNPLVLSSGKGCKLYDPEGREYLDCTSGIAVNALGHGDPDWVRAVT 109
           +ME+E++     Y   P+V S   G  ++DPEG+ Y+D  +  +    GH  P  ++A+ 
Sbjct: 43  LMELESEFSAHNYHPVPVVFSRANGSTIWDPEGKRYIDFLAAYSAVNQGHCHPKIMKALQ 102

Query: 110 EQANLLTHVSNVYYS 124
           EQ   LT  S  +Y+
Sbjct: 103 EQVEKLTLSSRAFYN 117


>AT2G38400.1 | Symbols: AGT3 | AGT3 (ALANINE:GLYOXYLATE
           AMINOTRANSFERASE 3); alanine-glyoxylate transaminase/
           catalytic/ pyridoxal phosphate binding / transaminase |
           chr2:16083779-16085974 FORWARD
          Length = 477

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 31/59 (52%)

Query: 64  RNPLVLSSGKGCKLYDPEGREYLDCTSGIAVNALGHGDPDWVRAVTEQANLLTHVSNVY 122
           R PL +  GK   L+D  GR YLD  +GIAV   GH  PD V  V  Q   L H + +Y
Sbjct: 78  RKPLNIVDGKMQYLFDESGRRYLDAFAGIAVVNCGHCHPDVVEPVINQIKRLQHPTVLY 136


>AT3G22200.1 | Symbols: POP2, GABA-T, HER1 | POP2 (POLLEN-PISTIL
           INCOMPATIBILITY 2); 4-aminobutyrate transaminase/
           4-aminobutyrate:pyruvate transaminase |
           chr3:7835286-7838863 FORWARD
          Length = 504

 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 31/51 (60%)

Query: 65  NPLVLSSGKGCKLYDPEGREYLDCTSGIAVNALGHGDPDWVRAVTEQANLL 115
           +PLV++  +G  +YD  G++YLD  +G+   ALG  +P  V A  EQ N L
Sbjct: 69  DPLVIAKSEGSYVYDDTGKKYLDSLAGLWCTALGGNEPRLVSAAVEQLNTL 119