Jatropha Genome Database

JcCB0290201.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0290201.10 - phase: 1 /TE/partial
         (1438 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   500   e-141
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   203   6e-52
AT1G21280.1 | Symbols:  | unknown protein | chr1:7447690-7448403...   119   1e-26
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...    99   2e-20
ATMG00240.1 | Symbols: ORF111A | hypothetical protein | chrM:689...    96   2e-19
AT1G34070.1 | Symbols:  | unknown protein | chr1:12402283-124032...    53   1e-06
AT5G48050.1 | Symbols:  | unknown protein | chr5:19472661-194737...    52   4e-06

>AT4G23160.1 | Symbols:  | protein kinase family protein |
            chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  500 bits (1288), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 239/532 (44%), Positives = 349/532 (65%), Gaps = 15/532 (2%)

Query: 876  KNIVPLPEVRRSTRTXRPPAWLNEYDTGTSSTSQINFTTSHMF----------FIAQLSK 925
            +N VP P V  S R  R PA+L +Y   + ++  I+  +  +           F+  ++K
Sbjct: 23   QNDVPEPSVHTSHRRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAK 82

Query: 926  IKEPCNYNDAKQNMNWVNAMNNELASLEQNNTWILTDLPPNTKPVGCKWVYRIKYNADGS 985
             KEP  YN+AK+ + W  AM++E+ ++E  +TW +  LPPN KP+GCKWVY+IKYN+DG+
Sbjct: 83   AKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGT 142

Query: 986  IDRYKARLVAKGYNQLLGLDYLHTFSPVAKLVTVRVFLTIAVANSWSVQHLDINNAYLHG 1045
            I+RYKARLVAKGY Q  G+D++ TFSPV KL +V++ L I+   ++++  LDI+NA+L+G
Sbjct: 143  IERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNG 202

Query: 1046 TIDEDIYMQIPPGY-----DKAAEGQVCKLQRSLYGLKQAGRQWNKALTTSLLSQGFTQS 1100
             +DE+IYM++PPGY     D      VC L++S+YGLKQA RQW    + +L+  GF QS
Sbjct: 203  DLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQS 262

Query: 1101 SFDHCLFTKGCGASFIALLVYVDDCLITSPSVTLISQLKTYLDQKFTIKNLGDVKYFLGI 1160
              DH  F K     F+ +LVYVDD +I S +   + +LK+ L   F +++LG +KYFLG+
Sbjct: 263  HSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGL 322

Query: 1161 EVARADDGMFLTQHKFISEIIQDTGLQDAKIAHSPYIQGMKLGTDMGHPLPDPGSYRRLV 1220
            E+AR+  G+ + Q K+  +++ +TGL   K +  P    +      G    D  +YRRL+
Sbjct: 323  EIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLI 382

Query: 1221 GRLLYLSMTRPDISYAVQQLSQFMQVPHHSHLKAALTVVKYLKGTSFTGLFLPAKNDLKL 1280
            GRL+YL +TR DIS+AV +LSQF + P  +H +A + ++ Y+KGT   GLF  ++ +++L
Sbjct: 383  GRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQL 442

Query: 1281 RAFSDADWASCSDSRRSITGFCIFLGTSLISWKTKKQSTVSRSSAESEYRAMASTVCEIQ 1340
            + FSDA + SC D+RRS  G+C+FLGTSLISWK+KKQ  VS+SSAE+EYRA++    E+ 
Sbjct: 443  QVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMM 502

Query: 1341 WLTSLLTDFHIHIARPIPLHCDNKAAIHIAANPVFHERTKHIDIDCHVVRSQ 1392
            WL     +  + +++P  L CDN AAIHIA N VFHERTKHI+ DCH VR +
Sbjct: 503  WLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
            chrM:227709-228431 REVERSE
          Length = 240

 Score =  203 bits (517), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 102/225 (45%), Positives = 145/225 (64%), Gaps = 3/225 (1%)

Query: 1118 LLVYVDDCLITSPSVTLISQLKTYLDQKFTIKNLGDVKYFLGIEVARADDGMFLTQHKFI 1177
            LL+YVDD L+T  S TL++ L   L   F++K+LG V YFLGI++     G+FL+Q K+ 
Sbjct: 3    LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 1178 SEIIQDTGLQDAKIAHSPYIQGMKLGTDMGHP-LPDPGSYRRLVGRLLYLSMTRPDISYA 1236
             +I+ + G+ D K   +P    +KL + +     PDP  +R +VG L YL++TRPDISYA
Sbjct: 63   EQILNNAGMLDCKPMSTPL--PLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYA 120

Query: 1237 VQQLSQFMQVPHHSHLKAALTVVKYLKGTSFTGLFLPAKNDLKLRAFSDADWASCSDSRR 1296
            V  + Q M  P  +       V++Y+KGT F GL++   + L ++AF D+DWA C+ +RR
Sbjct: 121  VNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRR 180

Query: 1297 SITGFCIFLGTSLISWKTKKQSTVSRSSAESEYRAMASTVCEIQW 1341
            S TGFC FLG ++ISW  K+Q TVSRSS E+EYRA+A T  E+ W
Sbjct: 181  STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225


>AT1G21280.1 | Symbols:  | unknown protein | chr1:7447690-7448403
           REVERSE
          Length = 237

 Score =  119 bits (299), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 7   FSLVNTPLTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDRWLTADSMVVSW 66
           FS+        NY++W    +  LR  KK GFI+G +  P P S  Y  W   ++MV+ W
Sbjct: 30  FSIQKLSKDEDNYVAWKIRFRSFLRVTKKFGFIDGTLPKPDPFSPLYQPWEQCNAMVMYW 89

Query: 67  LLNAISKDISNAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGNTSVTDYYT 126
           L+N+++  +  + ++ + A  +W++L++ +       IYQ+ R +A  +QG  SV +Y+ 
Sbjct: 90  LMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDLKIYQLRRRLATLRQGGDSVEEYFG 149

Query: 127 NLKRRWDELSCLAPLPIC------CDSGTAIADYDNNRRLMQFLMG--LGDEYDNVKNQI 178
            L + W ELS  AP+P C      C+      +     +  +FLMG  L   ++ V  +I
Sbjct: 150 KLSKVWMELSEYAPIPECKCGGCNCECTKRAEEAREKEQRYEFLMGLKLNQGFEAVTTKI 209

Query: 179 LLQDPLPSLNKAFSMIISVE 198
           + Q P PSL++AF+M+   E
Sbjct: 210 MFQKPPPSLHEAFAMVKDAE 229


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
            chrM:228573-229085 REVERSE
          Length = 170

 Score = 99.4 bits (246), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 66/100 (66%)

Query: 927  KEPCNYNDAKQNMNWVNAMNNELASLEQNNTWILTDLPPNTKPVGCKWVYRIKYNADGSI 986
            KEP +   A ++  W  AM  EL +L +N TWIL   P N   +GCKWV++ K ++DG++
Sbjct: 26   KEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTL 85

Query: 987  DRYKARLVAKGYNQLLGLDYLHTFSPVAKLVTVRVFLTIA 1026
            DR KARLVAKG++Q  G+ ++ T+SPV +  T+R  L +A
Sbjct: 86   DRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125


>ATMG00240.1 | Symbols: ORF111A | hypothetical protein |
            chrM:68918-69253 REVERSE
          Length = 111

 Score = 95.9 bits (237), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 41/79 (51%), Positives = 60/79 (75%)

Query: 1224 LYLSMTRPDISYAVQQLSQFMQVPHHSHLKAALTVVKYLKGTSFTGLFLPAKNDLKLRAF 1283
            +YL++TRPD+++AV +LSQF      + ++A   V+ Y+KGT   GLF  A +DL+L+AF
Sbjct: 1    MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 1284 SDADWASCSDSRRSITGFC 1302
            +D+DWASC D+RRS+TGFC
Sbjct: 61   ADSDWASCPDTRRSVTGFC 79


>AT1G34070.1 | Symbols:  | unknown protein | chr1:12402283-12403209
           FORWARD
          Length = 308

 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 34/233 (14%)

Query: 18  NYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDRWLTADSMVVSWLLNAIS-KDIS 76
           NY +W         +   +G I+G + P +  ++D + W   D +V   L   ++ K   
Sbjct: 30  NYDAWRELFLTHCLSFDVMGHIDGTLLPTN--ANDVN-WQKRDGIVKLSLYGTLTPKQFQ 86

Query: 77  NAFVFCKNAKALWDELKQRYGESNGPMIYQIEREIAGYKQGNTSVTDYYTNLKRRWDELS 136
            +FV    ++ +W  +K ++  +      +++ E+     G+  V DYY  +K+  D L 
Sbjct: 87  GSFVTSSTSRDIWLRIKNQFRNNKDARALRLDSELRTKDIGDMRVADYYRKMKKLADSLR 146

Query: 137 CLAPLPICCDSGTAIADYDNNRRLMQFLM-GLGDEYDNVKNQILLQDPLPSLNKAFSMII 195
            +  +P+             +R L+ +++ GL  ++DN+ N I  + P PS + A +M+ 
Sbjct: 147 NVD-VPVT------------DRNLVMYVLNGLNPKFDNIINVIKHRQPFPSFDDAATMLQ 193

Query: 196 SVEK--QREVQTDST-----------ASSETAAVMLAQR---NPTGTRGNARA 232
             E   +R ++ + T           A SE   V   QR   N  G RG  R 
Sbjct: 194 EEEDRLKRAIKPNPTHVDHSSSSTVLACSEAPPVTNFQRSGGNQMGYRGRGRG 246


>AT5G48050.1 | Symbols:  | unknown protein | chr5:19472661-19473770
           REVERSE
          Length = 369

 Score = 51.6 bits (122), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 16/196 (8%)

Query: 6   GFSLVNTPLTGQNYLSWSRSVQIALRAKKKLGFINGKIKPPSPESDDYDRWLTADSMVVS 65
            +  V   L   NY  W    +    +   LG I+G    P+P ++   RW   D +V  
Sbjct: 20  AYIFVTLDLNKLNYDVWRELFETLCLSFGVLGHIDGS-STPTPMTEK--RWKERDGLVKM 76

Query: 66  WLLNAISKDISNAFVFCK-NAKALWDELKQRYGESNGPMIYQIEREIAGYKQGNTSVTDY 124
           W+   I+  + +  +     A+ LW  L+  + ++      Q E E+      + SV +Y
Sbjct: 77  WIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRTTTIDDLSVHEY 136

Query: 125 YTNLKRRWDELSCLAPLPICCDSGTAIADYDNNRRLMQFLMGLGDEYDNVKNQILLQDPL 184
              LK        L+ L    DS   I+D      +M  L GL ++YD + N I  + P 
Sbjct: 137 CQKLK-------SLSDLLTNVDS--PISD---RVLVMHLLNGLTEKYDYILNVIKHKSPF 184

Query: 185 PSLNKAFSMIISVEKQ 200
           PS  +A SM++  E +
Sbjct: 185 PSFTEARSMLLMEESR 200