Jatropha Genome Database
- JcCB0290191.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0290191.10 + phase: 0
(162 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G02080.1 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana Ind... 266 6e-72
AT2G02070.1 | Symbols: AtIDD5 | AtIDD5 (Arabidopsis thaliana Ind... 255 1e-68
AT1G14580.1 | Symbols: | zinc finger (C2H2 type) family protein... 252 6e-68
AT2G02080.2 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana Ind... 246 4e-66
AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding... 234 2e-62
AT3G50700.1 | Symbols: AtIDD2 | AtIDD2 (Arabidopsis thaliana Ind... 234 2e-62
AT1G03840.2 | Symbols: MGP | MGP (Magpie); nucleic acid binding ... 233 4e-62
AT5G66730.1 | Symbols: | zinc finger (C2H2 type) family protein... 232 8e-62
AT1G03840.1 | Symbols: MGP | MGP (Magpie); nucleic acid binding ... 232 9e-62
AT3G13810.1 | Symbols: AtIDD11 | AtIDD11 (Arabidopsis thaliana I... 228 9e-61
AT5G44160.1 | Symbols: NUC | NUC (nutcracker); nucleic acid bind... 228 9e-61
AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein... 228 1e-60
AT1G55110.1 | Symbols: AtIDD7 | AtIDD7 (Arabidopsis thaliana Ind... 227 3e-60
AT5G60470.1 | Symbols: | nucleic acid binding / transcription f... 221 1e-58
AT4G02670.1 | Symbols: AtIDD12 | AtIDD12 (Arabidopsis thaliana I... 218 1e-57
AT1G68130.1 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana I... 180 4e-46
AT2G01940.1 | Symbols: SGR5, ATIDD15 | nucleic acid binding / tr... 179 6e-46
AT1G25250.1 | Symbols: AtIDD16 | AtIDD16 (Arabidopsis thaliana I... 174 1e-44
AT2G01940.3 | Symbols: SGR5, ATIDD15 | nucleic acid binding / tr... 173 4e-44
AT1G68130.2 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana I... 143 4e-35
AT2G01940.2 | Symbols: SGR5, ATIDD15 | nucleic acid binding / tr... 142 7e-35
AT1G34370.3 | Symbols: STOP1 | STOP1 (sensitive to proton rhizot... 81 3e-16
AT1G34370.1 | Symbols: STOP1 | STOP1 (sensitive to proton rhizot... 80 4e-16
AT1G34370.2 | Symbols: STOP1 | STOP1 (sensitive to proton rhizot... 80 4e-16
AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT); nuclei... 80 4e-16
AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5)... 80 4e-16
AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3)... 80 6e-16
AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4)... 79 1e-15
AT1G13290.1 | Symbols: DOT5 | DOT5 (DEFECTIVELY ORGANIZED TRIBUT... 79 2e-15
AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein... 77 6e-15
AT1G34790.1 | Symbols: TT1 | TT1 (transparent testa 1); transcri... 75 1e-14
>AT2G02080.1 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana
Indeterminate(ID)-Domain 4); transcription factor |
chr2:518328-521170 REVERSE
Length = 516
Score = 266 bits (679), Expect = 6e-72, Method: Composition-based stats.
Identities = 121/148 (81%), Positives = 128/148 (86%), Gaps = 17/148 (11%)
Query: 32 SAPPQKKKRNQPGTPS-----------------KFICEVCNKGFQREQNLQLHRRGHNLP 74
SAPP KK+RNQPG P+ +FIC+VCNKGFQREQNLQLHRRGHNLP
Sbjct: 49 SAPPPKKRRNQPGNPNPDAEVVALSPKTLMATNRFICDVCNKGFQREQNLQLHRRGHNLP 108
Query: 75 WKLKQKTTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRY 134
WKLKQK+TKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHY RKHGEKKWKCEKCSKRY
Sbjct: 109 WKLKQKSTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRY 168
Query: 135 AVQSDWKAHSKTCGTREYRCDCGTLFSR 162
AVQSDWKAHSKTCGT+EYRCDCGT+FSR
Sbjct: 169 AVQSDWKAHSKTCGTKEYRCDCGTIFSR 196
>AT2G02070.1 | Symbols: AtIDD5 | AtIDD5 (Arabidopsis thaliana
Indeterminate(ID)-Domain 5); nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:505523-509154 FORWARD
Length = 602
Score = 255 bits (651), Expect = 1e-68, Method: Composition-based stats.
Identities = 119/144 (82%), Positives = 125/144 (86%), Gaps = 17/144 (11%)
Query: 36 QKKKRNQPGTPS-----------------KFICEVCNKGFQREQNLQLHRRGHNLPWKLK 78
QKKKRNQP TP+ +FICEVCNKGFQREQNLQLHRRGHNLPWKLK
Sbjct: 51 QKKKRNQPRTPNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLK 110
Query: 79 QKTTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQS 138
QK+TKEVKRKVYLCPEP+CVHHDPSRALGDLTGIKKHY RKHGEKKWKC+KCSKRYAVQS
Sbjct: 111 QKSTKEVKRKVYLCPEPSCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQS 170
Query: 139 DWKAHSKTCGTREYRCDCGTLFSR 162
DWKAHSKTCGT+EYRCDCGTLFSR
Sbjct: 171 DWKAHSKTCGTKEYRCDCGTLFSR 194
>AT1G14580.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr1:4990070-4992442 FORWARD
Length = 467
Score = 252 bits (644), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 116/151 (76%), Positives = 128/151 (84%), Gaps = 17/151 (11%)
Query: 29 TAISAPPQKKKRNQPGTPS-----------------KFICEVCNKGFQREQNLQLHRRGH 71
T+ APP KK+RNQPG P+ +F+CEVCNKGFQREQNLQLHRRGH
Sbjct: 45 TSSVAPPPKKRRNQPGNPNPDAEVIALSPKTIMATNRFLCEVCNKGFQREQNLQLHRRGH 104
Query: 72 NLPWKLKQKTTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCS 131
NLPWKLKQK+ KEV+RKVYLCPEP+CVHHDP+RALGDLTGIKKHY RKHGEKKWKC+KCS
Sbjct: 105 NLPWKLKQKSNKEVRRKVYLCPEPSCVHHDPARALGDLTGIKKHYYRKHGEKKWKCDKCS 164
Query: 132 KRYAVQSDWKAHSKTCGTREYRCDCGTLFSR 162
KRYAVQSDWKAHSKTCGT+EYRCDCGT+FSR
Sbjct: 165 KRYAVQSDWKAHSKTCGTKEYRCDCGTIFSR 195
>AT2G02080.2 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana
Indeterminate(ID)-Domain 4); transcription factor |
chr2:518328-520619 REVERSE
Length = 439
Score = 246 bits (628), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 109/116 (93%), Positives = 115/116 (99%)
Query: 47 SKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVKRKVYLCPEPTCVHHDPSRAL 106
++FIC+VCNKGFQREQNLQLHRRGHNLPWKLKQK+TKEVKRKVYLCPEPTCVHHDPSRAL
Sbjct: 4 NRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVHHDPSRAL 63
Query: 107 GDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR 162
GDLTGIKKHY RKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGT+EYRCDCGT+FSR
Sbjct: 64 GDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSR 119
>AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding /
protein binding / protein homodimerization/
transcription factor/ zinc ion binding |
chr5:745849-748678 FORWARD
Length = 503
Score = 234 bits (597), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 109/144 (75%), Positives = 122/144 (84%), Gaps = 18/144 (12%)
Query: 37 KKKRNQPGTP-----------------SKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 79
KKKRNQPGTP ++F+CE+CNKGFQR+QNLQLHRRGHNLPWKLKQ
Sbjct: 53 KKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 112
Query: 80 KTTKEV-KRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQS 138
++ +EV K+KVY+CP TCVHHD SRALGDLTGIKKHYSRKHGEKKWKCEKCSK+YAVQS
Sbjct: 113 RSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQS 172
Query: 139 DWKAHSKTCGTREYRCDCGTLFSR 162
DWKAH+KTCGTREY+CDCGTLFSR
Sbjct: 173 DWKAHAKTCGTREYKCDCGTLFSR 196
>AT3G50700.1 | Symbols: AtIDD2 | AtIDD2 (Arabidopsis thaliana
Indeterminate(ID)-Domain 2); nucleic acid binding /
transcription factor/ zinc ion binding |
chr3:18840945-18842829 FORWARD
Length = 452
Score = 234 bits (597), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 105/143 (73%), Positives = 120/143 (83%), Gaps = 17/143 (11%)
Query: 37 KKKRNQPGTP-----------------SKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 79
KKKRN PG P ++F+CE+CNKGFQR+QNLQLHRRGHNLPWKL+Q
Sbjct: 34 KKKRNLPGMPDPESEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ 93
Query: 80 KTTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSD 139
K+ KEVK+KVY+CPE +CVHHDPSRALGDLTGIKKH+ RKHGEKKWKC+KCSK+YAVQSD
Sbjct: 94 KSNKEVKKKVYVCPEVSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD 153
Query: 140 WKAHSKTCGTREYRCDCGTLFSR 162
WKAHSK CGT+EY+CDCGTLFSR
Sbjct: 154 WKAHSKICGTKEYKCDCGTLFSR 176
>AT1G03840.2 | Symbols: MGP | MGP (Magpie); nucleic acid binding /
protein binding / transcription factor/ zinc ion binding
| chr1:967596-970058 REVERSE
Length = 504
Score = 233 bits (594), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 105/148 (70%), Positives = 124/148 (83%), Gaps = 15/148 (10%)
Query: 30 AISAPPQKKKRNQPGTP---------------SKFICEVCNKGFQREQNLQLHRRGHNLP 74
+++ P KKKRN PG P ++F+CE+C KGFQR+QNLQLHRRGHNLP
Sbjct: 34 SLNPPLVKKKRNLPGNPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLP 93
Query: 75 WKLKQKTTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRY 134
WKLKQ+T+KEV+++VY+CPE +CVHH P+RALGDLTGIKKH+ RKHGEKKWKCEKC+KRY
Sbjct: 94 WKLKQRTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRY 153
Query: 135 AVQSDWKAHSKTCGTREYRCDCGTLFSR 162
AVQSDWKAHSKTCGTREYRCDCGT+FSR
Sbjct: 154 AVQSDWKAHSKTCGTREYRCDCGTIFSR 181
>AT5G66730.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:26641914-26643883 REVERSE
Length = 500
Score = 232 bits (591), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 104/143 (72%), Positives = 119/143 (83%), Gaps = 17/143 (11%)
Query: 37 KKKRNQPGTP-----------------SKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 79
KKKRN PG P ++F+CE+CNKGFQR+QNLQLHRRGHNLPWKL+Q
Sbjct: 32 KKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ 91
Query: 80 KTTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSD 139
++TKEV++KVY+CP CVHHDPSRALGDLTGIKKH+ RKHGEKKWKCEKCSK+YAVQSD
Sbjct: 92 RSTKEVRKKVYVCPVSGCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSD 151
Query: 140 WKAHSKTCGTREYRCDCGTLFSR 162
WKAHSK CGT+EY+CDCGTLFSR
Sbjct: 152 WKAHSKICGTKEYKCDCGTLFSR 174
>AT1G03840.1 | Symbols: MGP | MGP (Magpie); nucleic acid binding /
protein binding / transcription factor/ zinc ion binding
| chr1:967596-970058 REVERSE
Length = 506
Score = 232 bits (591), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 105/150 (70%), Positives = 124/150 (82%), Gaps = 17/150 (11%)
Query: 30 AISAPPQKKKRNQPGTP-----------------SKFICEVCNKGFQREQNLQLHRRGHN 72
+++ P KKKRN PG P ++F+CE+C KGFQR+QNLQLHRRGHN
Sbjct: 34 SLNPPLVKKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHN 93
Query: 73 LPWKLKQKTTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSK 132
LPWKLKQ+T+KEV+++VY+CPE +CVHH P+RALGDLTGIKKH+ RKHGEKKWKCEKC+K
Sbjct: 94 LPWKLKQRTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAK 153
Query: 133 RYAVQSDWKAHSKTCGTREYRCDCGTLFSR 162
RYAVQSDWKAHSKTCGTREYRCDCGT+FSR
Sbjct: 154 RYAVQSDWKAHSKTCGTREYRCDCGTIFSR 183
>AT3G13810.1 | Symbols: AtIDD11 | AtIDD11 (Arabidopsis thaliana
Indeterminate(ID)-Domain 11); nucleic acid binding /
transcription factor/ zinc ion binding |
chr3:4544941-4547300 FORWARD
Length = 513
Score = 228 bits (582), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 107/145 (73%), Positives = 121/145 (83%), Gaps = 18/145 (12%)
Query: 36 QKKKRNQPGTP-----------------SKFICEVCNKGFQREQNLQLHRRGHNLPWKLK 78
QKK+RNQPG P ++F+CE+CNKGFQR+QNLQLHRRGHNLPWKLK
Sbjct: 69 QKKRRNQPGNPDPESEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLK 128
Query: 79 QKTTKEVKRK-VYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQ 137
Q++ KEV RK VY+CPE +CVHHDPSRALGDLTGIKKH+ RKHGEKKWKC+KCSK+YAVQ
Sbjct: 129 QRSNKEVIRKKVYVCPEASCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQ 188
Query: 138 SDWKAHSKTCGTREYRCDCGTLFSR 162
SD KAHSKTCGT+EYRCDCGTLFSR
Sbjct: 189 SDCKAHSKTCGTKEYRCDCGTLFSR 213
>AT5G44160.1 | Symbols: NUC | NUC (nutcracker); nucleic acid binding
/ transcription factor/ zinc ion binding |
chr5:17773091-17775513 FORWARD
Length = 466
Score = 228 bits (582), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 107/151 (70%), Positives = 122/151 (80%), Gaps = 17/151 (11%)
Query: 29 TAISAPPQKKKRNQPGTP-----------------SKFICEVCNKGFQREQNLQLHRRGH 71
+ I+ P KKKRN PG P ++F+CEVC KGFQR+QNLQLHRRGH
Sbjct: 29 SLINPPLVKKKRNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGH 88
Query: 72 NLPWKLKQKTTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCS 131
NLPWKLKQ+T+KEV+++VY+CPE TCVHH SRALGDLTGIKKH+ RKHGEKKW CEKC+
Sbjct: 89 NLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCA 148
Query: 132 KRYAVQSDWKAHSKTCGTREYRCDCGTLFSR 162
KRYAVQSDWKAHSKTCGTREYRCDCGT+FSR
Sbjct: 149 KRYAVQSDWKAHSKTCGTREYRCDCGTIFSR 179
>AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr3:16596850-16598550 REVERSE
Length = 446
Score = 228 bits (582), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/144 (74%), Positives = 120/144 (83%), Gaps = 18/144 (12%)
Query: 37 KKKRNQPGTP-----------------SKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 79
K+KRN PG P ++FICEVCNKGF+R+QNLQLHRRGHNLPWKLKQ
Sbjct: 39 KRKRNLPGNPDPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQ 98
Query: 80 KTTKE-VKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQS 138
+T KE VK+KVY+CPE TCVHHDP+RALGDLTGIKKH+SRKHGEKKWKC+KCSK+YAV S
Sbjct: 99 RTNKEQVKKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMS 158
Query: 139 DWKAHSKTCGTREYRCDCGTLFSR 162
DWKAHSK CGT+EYRCDCGTLFSR
Sbjct: 159 DWKAHSKICGTKEYRCDCGTLFSR 182
>AT1G55110.1 | Symbols: AtIDD7 | AtIDD7 (Arabidopsis thaliana
Indeterminate(ID)-Domain 7); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:20560406-20562625 REVERSE
Length = 455
Score = 227 bits (578), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 106/144 (73%), Positives = 120/144 (83%), Gaps = 18/144 (12%)
Query: 37 KKKRNQPGTP-----------------SKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 79
K+KRNQPG P ++FICEVCNKGFQR+QNLQLH+RGHNLPWKLKQ
Sbjct: 63 KRKRNQPGNPDPEAEVMALSPKTLMATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQ 122
Query: 80 KTTKEVKRK-VYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQS 138
++ K+V RK VY+CPEP CVHH PSRALGDLTGIKKH+ RKHGEKKWKCEKCSK+YAVQS
Sbjct: 123 RSNKDVVRKKVYVCPEPGCVHHHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQS 182
Query: 139 DWKAHSKTCGTREYRCDCGTLFSR 162
DWKAH+KTCGT+EY+CDCGTLFSR
Sbjct: 183 DWKAHAKTCGTKEYKCDCGTLFSR 206
>AT5G60470.1 | Symbols: | nucleic acid binding / transcription
factor/ zinc ion binding | chr5:24320614-24322790
FORWARD
Length = 450
Score = 221 bits (563), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 96/117 (82%), Positives = 111/117 (94%), Gaps = 1/117 (0%)
Query: 47 SKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTK-EVKRKVYLCPEPTCVHHDPSRA 105
++F CE+CNKGFQREQNLQLH+RGHNLPWKLKQKT K +VK+KVY+CPE +CVHHDP+RA
Sbjct: 62 NRFFCEICNKGFQREQNLQLHKRGHNLPWKLKQKTNKNQVKKKVYICPEKSCVHHDPARA 121
Query: 106 LGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR 162
LGDLTGIKKH+SRKHGEKKWKC+KCSK+YAV SDWKAH+K CG+RE+RCDCGTLFSR
Sbjct: 122 LGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNKICGSREFRCDCGTLFSR 178
>AT4G02670.1 | Symbols: AtIDD12 | AtIDD12 (Arabidopsis thaliana
Indeterminate(ID)-Domain 12); nucleic acid binding /
transcription factor/ zinc ion binding |
chr4:1176190-1178489 REVERSE
Length = 402
Score = 218 bits (556), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/144 (72%), Positives = 114/144 (79%), Gaps = 18/144 (12%)
Query: 37 KKKRNQPGTP-----------------SKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 79
KKKR PG P ++F+CE+CNKGFQR+QNLQLHRRGHNLPWKLKQ
Sbjct: 53 KKKRGLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 112
Query: 80 KTTKEV-KRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQS 138
K TKE K+KVY+CPE C HH PSRALGDLTGIKKH+ RKHGEKKWKCEKCSK YAVQS
Sbjct: 113 KNTKEQQKKKVYVCPETNCAHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQS 172
Query: 139 DWKAHSKTCGTREYRCDCGTLFSR 162
DWKAH+K CGTR+YRCDCGTLFSR
Sbjct: 173 DWKAHTKICGTRDYRCDCGTLFSR 196
>AT1G68130.1 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana
Indeterminate(ID)-Domain 14); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:25532484-25534317 FORWARD
Length = 419
Score = 180 bits (456), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 110/150 (73%), Gaps = 19/150 (12%)
Query: 32 SAPPQKKKRNQPGTPS-----------------KFICEVCNKGFQREQNLQLHRRGHNLP 74
+A QK+KR GTP +++CE+CN+GFQR+QNLQ+HRR H +P
Sbjct: 36 TAVTQKRKRRPAGTPDPEAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVP 95
Query: 75 WKL-KQKTTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGE-KKWKCEKCSK 132
WKL K++T +EV+++VY+CPEPTC+HH+P ALGDL GIKKH+ RKH K+W CE+CSK
Sbjct: 96 WKLLKRETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWICERCSK 155
Query: 133 RYAVQSDWKAHSKTCGTREYRCDCGTLFSR 162
YAVQSD+KAH KTCGTR + CDCG +FSR
Sbjct: 156 GYAVQSDYKAHLKTCGTRGHSCDCGRVFSR 185
>AT2G01940.1 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:432652-434917 FORWARD
Length = 445
Score = 179 bits (455), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 86/153 (56%), Positives = 107/153 (69%), Gaps = 19/153 (12%)
Query: 29 TAISAPPQKKKRNQPGTPS-----------------KFICEVCNKGFQREQNLQLHRRGH 71
T + QK+KR GTP ++ICE+CN+GFQR+QNLQ+HRR H
Sbjct: 36 TTTNTSTQKRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRH 95
Query: 72 NLPWKL-KQKTTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGE-KKWKCEK 129
+PWKL K+ EVK++VY+CPEPTC+HH+P ALGDL GIKKH+ RKH K+W CE+
Sbjct: 96 KVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCER 155
Query: 130 CSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR 162
CSK YAVQSD+KAH KTCGTR + CDCG +FSR
Sbjct: 156 CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSR 188
>AT1G25250.1 | Symbols: AtIDD16 | AtIDD16 (Arabidopsis thaliana
Indeterminate(ID)-Domain 16); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:8849549-8851520 FORWARD
Length = 362
Score = 174 bits (442), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 76/118 (64%), Positives = 98/118 (83%), Gaps = 3/118 (2%)
Query: 48 KFICEVCNKGFQREQNLQLHRRGHNLPWKL--KQKTTKEVKRKVYLCPEPTCVHHDPSRA 105
+++CE+CN+GFQR+QNLQ+HRR H +PWKL + K +EV+++VY+CPEPTC+HHDP A
Sbjct: 38 RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVRKRVYVCPEPTCLHHDPCHA 97
Query: 106 LGDLTGIKKHYSRKHG-EKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR 162
LGDL GIKKH+ RKH K+W CE+CSK YAVQSD+KAH KTCG+R + CDCG +FSR
Sbjct: 98 LGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKTCGSRGHSCDCGRVFSR 155
>AT2G01940.3 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:432652-434917 FORWARD
Length = 446
Score = 173 bits (439), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 84/152 (55%), Positives = 104/152 (68%), Gaps = 19/152 (12%)
Query: 29 TAISAPPQKKKRNQPGTPS-----------------KFICEVCNKGFQREQNLQLHRRGH 71
T + QK+KR GTP ++ICE+CN+GFQR+QNLQ+HRR H
Sbjct: 36 TTTNTSTQKRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRH 95
Query: 72 NLPWKL-KQKTTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGE-KKWKCEK 129
+PWKL K+ EVK++VY+CPEPTC+HH+P ALGDL GIKKH+ RKH K+W CE+
Sbjct: 96 KVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCER 155
Query: 130 CSKRYAVQSDWKAHSKTCGTREYRCDCGTLFS 161
CSK YAVQSD+KAH KTCGTR + CDCG S
Sbjct: 156 CSKGYAVQSDYKAHLKTCGTRGHSCDCGFFSS 187
>AT1G68130.2 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana
Indeterminate(ID)-Domain 14); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:25532843-25534317 FORWARD
Length = 333
Score = 143 bits (361), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 65/99 (65%), Positives = 82/99 (82%), Gaps = 2/99 (2%)
Query: 66 LHRRGHNLPWKL-KQKTTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGE-K 123
+HRR H +PWKL K++T +EV+++VY+CPEPTC+HH+P ALGDL GIKKH+ RKH K
Sbjct: 1 MHRRRHKVPWKLLKRETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHK 60
Query: 124 KWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR 162
+W CE+CSK YAVQSD+KAH KTCGTR + CDCG +FSR
Sbjct: 61 QWICERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSR 99
>AT2G01940.2 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:433232-434917 FORWARD
Length = 356
Score = 142 bits (359), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 65/99 (65%), Positives = 79/99 (79%), Gaps = 2/99 (2%)
Query: 66 LHRRGHNLPWKL-KQKTTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGE-K 123
+HRR H +PWKL K+ EVK++VY+CPEPTC+HH+P ALGDL GIKKH+ RKH K
Sbjct: 1 MHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHK 60
Query: 124 KWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR 162
+W CE+CSK YAVQSD+KAH KTCGTR + CDCG +FSR
Sbjct: 61 QWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSR 99
>AT1G34370.3 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12551449-12552501
FORWARD
Length = 350
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 14/132 (10%)
Query: 45 TPSKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVKRKV----------YLCPE 94
P C +C KGF+R+ NL++H RGH +K K K V Y CP
Sbjct: 91 APHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPF 150
Query: 95 PTC---VHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKC-SKRYAVQSDWKAHSKTCGTR 150
C H + L + +K HY R H +K + C +C +K+++V +D K H K CG
Sbjct: 151 LGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEKHCGKN 210
Query: 151 EYRCDCGTLFSR 162
++ C CGT FSR
Sbjct: 211 KWLCSCGTTFSR 222
>AT1G34370.1 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12551002-12552501
FORWARD
Length = 499
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 14/132 (10%)
Query: 45 TPSKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVKRKV----------YLCPE 94
P C +C KGF+R+ NL++H RGH +K K K V Y CP
Sbjct: 240 APHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPF 299
Query: 95 PTC---VHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKC-SKRYAVQSDWKAHSKTCGTR 150
C H + L + +K HY R H +K + C +C +K+++V +D K H K CG
Sbjct: 300 LGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEKHCGKN 359
Query: 151 EYRCDCGTLFSR 162
++ C CGT FSR
Sbjct: 360 KWLCSCGTTFSR 371
>AT1G34370.2 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12551002-12552501
FORWARD
Length = 499
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 14/132 (10%)
Query: 45 TPSKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVKRKV----------YLCPE 94
P C +C KGF+R+ NL++H RGH +K K K V Y CP
Sbjct: 240 APHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPF 299
Query: 95 PTC---VHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKC-SKRYAVQSDWKAHSKTCGTR 150
C H + L + +K HY R H +K + C +C +K+++V +D K H K CG
Sbjct: 300 LGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEKHCGKN 359
Query: 151 EYRCDCGTLFSR 162
++ C CGT FSR
Sbjct: 360 KWLCSCGTTFSR 371
>AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT); nucleic
acid binding / transcription factor/ zinc ion binding |
chr3:21370936-21373121 FORWARD
Length = 383
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 46 PSKFICEVCNKGFQREQNLQLHRRGHNL-----PWKLKQKTTKEVKRKVYLCPEPTC--- 97
P++F C VC K F R N+Q+H GH P L+ + R C P C
Sbjct: 214 PTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNN 273
Query: 98 VHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCG 157
+ H ++ L D ++ HY RKHG K + C KC K +AV+ DW+ H K CG Y C CG
Sbjct: 274 IDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWY-CICG 332
Query: 158 TLF 160
+ F
Sbjct: 333 SDF 335
>AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5) |
chr1:18989925-18992034 REVERSE
Length = 337
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 46 PSKFICEVCNKGFQREQNLQLHRRGHNL-----PWKLKQKTTKEVKRKVYLCPEPTC--- 97
P++F C +C K F R N+Q+H GH P L+ + R C P C
Sbjct: 175 PTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCFCCAPGCKNN 234
Query: 98 VHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCG 157
+ H ++ L D ++ HY RKHG K + C C K +AV+ DW+ H K CG Y C CG
Sbjct: 235 IDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWY-CSCG 293
Query: 158 TLF 160
+ F
Sbjct: 294 SDF 296
>AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3) |
chr1:2610680-2613180 REVERSE
Length = 337
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 46 PSKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKE-------VKRKVYLCPEP--T 96
P +F C +C+K F R N+Q+H GH ++ + K ++ Y C E
Sbjct: 177 PMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAILRLPCYCCAEGCKN 236
Query: 97 CVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDC 156
++H S+ L D ++ HY RKHG K + C KC K AV+ DW+ H K CG Y C C
Sbjct: 237 NINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNCGKLWY-CTC 295
Query: 157 GTLF 160
G+ F
Sbjct: 296 GSDF 299
>AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4) |
chr3:7313759-7315792 REVERSE
Length = 412
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 9/123 (7%)
Query: 46 PSKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVKRKVYL-----CPEPTC--- 97
P++F C +C K F R N+Q+H GH ++ ++ + + L C P C
Sbjct: 253 PTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAPGCKNN 312
Query: 98 VHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCG 157
+ H +R L D ++ HY RKHG + + C +C K +AV+ DW+ H K CG Y C CG
Sbjct: 313 IDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWY-CSCG 371
Query: 158 TLF 160
+ F
Sbjct: 372 SDF 374
>AT1G13290.1 | Symbols: DOT5 | DOT5 (DEFECTIVELY ORGANIZED
TRIBUTARIES 5); transcription factor |
chr1:4550366-4551527 REVERSE
Length = 302
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 46 PSKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVKRKV-------YLCPEP--T 96
P++F C VCNK F R N+Q+H GH ++ ++ + K Y C E
Sbjct: 98 PTQFSCSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKN 157
Query: 97 CVHHDPSRALGDLTGIKKHYSRKHGEKKWKC-EKCSKRYAVQSDWKAHSKTCGTREYRCD 155
+ H S+ L D ++ HY RKHG K ++C +KC K +AV+ DW+ H K CG + + C
Sbjct: 158 NIDHPRSKPLKDFRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCG-KLWFCV 216
Query: 156 CGTLF 160
CG+ F
Sbjct: 217 CGSDF 221
>AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:7653541-7654662 REVERSE
Length = 373
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 51 CEVCNKGFQREQNLQLHRRGHNLPWKLKQ----------KTTKEVKRKVYLCPEPTC--- 97
C++C KGF+R+ NL++H R H +K ++ K +K+ Y CP+ C
Sbjct: 219 CQICGKGFKRDANLRMHMRAHGDEYKTREALISPTSQDKKGGYSLKKHYYSCPQHGCRWN 278
Query: 98 VHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCS-KRYAVQSDWKAHSKTCGTREYRCDC 156
H+ + L + K HY R H K + C +CS K ++V SD + H K CG ++ C C
Sbjct: 279 QRHEKFQPLKSVICAKNHYKRSHCPKMYMCRRCSVKHFSVLSDLRTHEKHCGDIKWVCSC 338
Query: 157 GTLFSR 162
GT FSR
Sbjct: 339 GTKFSR 344
>AT1G34790.1 | Symbols: TT1 | TT1 (transparent testa 1);
transcription factor | chr1:12763953-12765489 FORWARD
Length = 303
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 47 SKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVKRKVYLCPEPTC--------V 98
+ F C VC K F R NLQ+H GH ++ ++ K + + L C +
Sbjct: 143 THFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVEGCRNHI 202
Query: 99 HHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGT 158
H S+ L D ++ HY RKHG K + C C K AV+ DW+ H K CG R + C CG+
Sbjct: 203 DHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEKNCGKR-WVCVCGS 261
Query: 159 LF 160
F
Sbjct: 262 DF 263