Jatropha Genome Database

JcCB0289761.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0289761.10 - phase: 0 
         (189 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G26220.1 | Symbols:  | GCN5-related N-acetyltransferase (GNAT...   248   2e-66
AT1G32070.3 | Symbols: ATNSI | ATNSI (NUCLEAR SHUTTLE INTERACTIN...   107   4e-24
AT1G32070.2 | Symbols: ATNSI | ATNSI (NUCLEAR SHUTTLE INTERACTIN...   105   2e-23
AT1G32070.1 | Symbols: ATNSI | ATNSI (NUCLEAR SHUTTLE INTERACTIN...   105   2e-23

>AT1G26220.1 | Symbols:  | GCN5-related N-acetyltransferase (GNAT)
           family protein | chr1:9071157-9071750 FORWARD
          Length = 197

 Score =  248 bits (633), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 112/152 (73%), Positives = 137/152 (90%)

Query: 38  YSISDDDLQSRGFLLRRTISDLNLDHLNSIFVAVGFPKRDPERIKLALENTNSLLWIEHK 97
           YSISD+DL+SRGFLLRRT   LNLD LNS+F AVGFP+RD  +I++AL++T++LLW+E++
Sbjct: 46  YSISDEDLESRGFLLRRTTEGLNLDQLNSVFAAVGFPRRDTAKIEVALQHTDALLWVEYE 105

Query: 98  KTQKPVAFARATGDNVFNAIIWDVVVDPSYQGIGLGKAVMERLVDELLEKGIINIALYSE 157
           KT++PVAFARATGD VFNAIIWDVVVDPS+Q  GLGKAVMERL+++L  KGI NIALYSE
Sbjct: 106 KTRRPVAFARATGDGVFNAIIWDVVVDPSFQSCGLGKAVMERLIEDLQVKGICNIALYSE 165

Query: 158 PRVLGFYRPLGFVADPDGIRGMVYSKKQKKKK 189
           PRVLGFYRPLGFV+DPDGI+GMV+ +KQ+ KK
Sbjct: 166 PRVLGFYRPLGFVSDPDGIKGMVFIRKQRNKK 197


>AT1G32070.3 | Symbols: ATNSI | ATNSI (NUCLEAR SHUTTLE INTERACTING);
           N-acetyltransferase | chr1:11534851-11536289 REVERSE
          Length = 257

 Score =  107 bits (267), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 90/144 (62%), Gaps = 17/144 (11%)

Query: 58  DLNLDHLNSIFVAVGFPKRDPERIKLALENTNSLLWI-----------------EHKKTQ 100
           ++++  L  +   VG+P+R   ++  AL+N+  +  +                 E ++ +
Sbjct: 114 EIDVYDLQGLCDKVGWPRRPLVKLAAALKNSYMVATLHSVMKSSSDSDSSGGDGEKQQEK 173

Query: 101 KPVAFARATGDNVFNAIIWDVVVDPSYQGIGLGKAVMERLVDELLEKGIINIALYSEPRV 160
           K +  ARAT D+ FNA IWDV+VDP YQG GLGKA++E+LV  LL++ I NI+L+++ +V
Sbjct: 174 KLIGMARATSDHAFNATIWDVLVDPEYQGQGLGKALVEKLVRALLQRDIGNISLFADSQV 233

Query: 161 LGFYRPLGFVADPDGIRGMVYSKK 184
           + FY+ LGF ADP+GI+GM +  K
Sbjct: 234 VDFYQNLGFEADPEGIKGMFWYPK 257


>AT1G32070.2 | Symbols: ATNSI | ATNSI (NUCLEAR SHUTTLE INTERACTING);
           N-acetyltransferase | chr1:11534851-11536289 REVERSE
          Length = 258

 Score =  105 bits (261), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 89/145 (61%), Gaps = 18/145 (12%)

Query: 58  DLNLDHLNSIFVAVGFPKRDPERIKLALENTNSLLWIEH------------------KKT 99
           ++++  L  +   VG+P+R   ++  AL+N+  +  +                    ++ 
Sbjct: 114 EIDVYDLQGLCDKVGWPRRPLVKLAAALKNSYMVATLHSVMKSSSDSDSSEGGDGEKQQE 173

Query: 100 QKPVAFARATGDNVFNAIIWDVVVDPSYQGIGLGKAVMERLVDELLEKGIINIALYSEPR 159
           +K +  ARAT D+ FNA IWDV+VDP YQG GLGKA++E+LV  LL++ I NI+L+++ +
Sbjct: 174 KKLIGMARATSDHAFNATIWDVLVDPEYQGQGLGKALVEKLVRALLQRDIGNISLFADSQ 233

Query: 160 VLGFYRPLGFVADPDGIRGMVYSKK 184
           V+ FY+ LGF ADP+GI+GM +  K
Sbjct: 234 VVDFYQNLGFEADPEGIKGMFWYPK 258


>AT1G32070.1 | Symbols: ATNSI | ATNSI (NUCLEAR SHUTTLE INTERACTING);
           N-acetyltransferase | chr1:11534851-11536289 REVERSE
          Length = 257

 Score =  105 bits (261), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 89/145 (61%), Gaps = 18/145 (12%)

Query: 58  DLNLDHLNSIFVAVGFPKRDPERIKLALENTNSLLWIEH------------------KKT 99
           ++++  L  +   VG+P+R   ++  AL+N+  +  +                    ++ 
Sbjct: 113 EIDVYDLQGLCDKVGWPRRPLVKLAAALKNSYMVATLHSVMKSSSDSDSSEGGDGEKQQE 172

Query: 100 QKPVAFARATGDNVFNAIIWDVVVDPSYQGIGLGKAVMERLVDELLEKGIINIALYSEPR 159
           +K +  ARAT D+ FNA IWDV+VDP YQG GLGKA++E+LV  LL++ I NI+L+++ +
Sbjct: 173 KKLIGMARATSDHAFNATIWDVLVDPEYQGQGLGKALVEKLVRALLQRDIGNISLFADSQ 232

Query: 160 VLGFYRPLGFVADPDGIRGMVYSKK 184
           V+ FY+ LGF ADP+GI+GM +  K
Sbjct: 233 VVDFYQNLGFEADPEGIKGMFWYPK 257