Jatropha Genome Database
- JcCB0289031.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0289031.10 + phase: 0 /partial
(132 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G05410.1 | Symbols: | transducin family protein / WD-40 repe... 182 5e-47
AT4G21130.1 | Symbols: EMB2271 | EMB2271 (EMBRYO DEFECTIVE 2271)... 170 2e-43
AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchles... 74 3e-14
AT2G41500.1 | Symbols: LIS, EMB2776 | EMB2776; nucleotide bindin... 69 1e-12
AT1G48630.1 | Symbols: RACK1B_AT | RACK1B_AT (RECEPTOR FOR ACTIV... 67 2e-12
AT3G21540.1 | Symbols: | transducin family protein / WD-40 repe... 66 5e-12
AT3G18130.1 | Symbols: RACK1C_AT | RACK1C_AT (RECEPTOR FOR ACTIV... 66 6e-12
AT3G49660.1 | Symbols: | transducin family protein / WD-40 repe... 65 1e-11
AT2G32700.6 | Symbols: LUH | WD-40 repeat family protein | chr2:... 65 1e-11
AT2G32700.2 | Symbols: LUH | WD-40 repeat family protein | chr2:... 65 1e-11
AT2G32700.1 | Symbols: LUH | WD-40 repeat family protein | chr2:... 65 1e-11
AT2G32700.4 | Symbols: LUH | WD-40 repeat family protein | chr2:... 65 1e-11
AT2G32700.5 | Symbols: LUH | WD-40 repeat family protein | chr2:... 65 1e-11
AT2G32700.3 | Symbols: LUH | WD-40 repeat family protein | chr2:... 65 1e-11
AT2G05720.1 | Symbols: | transducin family protein / WD-40 repe... 65 1e-11
AT1G61210.1 | Symbols: | WD-40 repeat family protein / katanin ... 64 2e-11
AT1G18080.1 | Symbols: ATARCA, RACK1A_AT | ATARCA; nucleotide bi... 62 7e-11
AT5G23430.2 | Symbols: | transducin family protein / WD-40 repe... 62 7e-11
AT5G23430.1 | Symbols: | transducin family protein / WD-40 repe... 62 7e-11
AT4G15900.1 | Symbols: PRL1 | PRL1 (PLEIOTROPIC REGULATORY LOCUS... 61 2e-10
AT5G64730.1 | Symbols: | transducin family protein / WD-40 repe... 60 3e-10
AT1G11160.1 | Symbols: | nucleotide binding | chr1:3733406-3739... 60 4e-10
AT3G49180.1 | Symbols: RID3 | RID3 (ROOT INITIATION DEFECTIVE 3)... 59 9e-10
AT5G25150.1 | Symbols: TAF5 | TAF5 (TBP-ASSOCIATED FACTOR 5); nu... 59 1e-09
AT4G32551.1 | Symbols: LUG, RON2 | LUG (LEUNIG); protein binding... 57 3e-09
AT5G08390.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 4e-09
AT1G24530.1 | Symbols: | transducin family protein / WD-40 repe... 56 7e-09
AT4G02730.1 | Symbols: | transducin family protein / WD-40 repe... 56 7e-09
AT1G71840.1 | Symbols: | transducin family protein / WD-40 repe... 55 9e-09
AT5G16750.1 | Symbols: TOZ | TOZ (TORMOZEMBRYO DEFECTIVE); nucle... 53 4e-08
AT1G49040.1 | Symbols: SCD1 | SCD1 (STOMATAL CYTOKINESIS-DEFECTI... 53 4e-08
AT5G50120.1 | Symbols: | transducin family protein / WD-40 repe... 53 6e-08
AT2G32950.1 | Symbols: COP1, ATCOP1, DET340, FUS1, EMB168 | COP1... 53 6e-08
AT5G67320.1 | Symbols: HOS15 | HOS15 (high expression of osmotic... 53 7e-08
AT1G73720.1 | Symbols: | transducin family protein / WD-40 repe... 52 9e-08
AT2G43770.1 | Symbols: | transducin family protein / WD-40 repe... 51 2e-07
AT2G37160.2 | Symbols: | transducin family protein / WD-40 repe... 50 3e-07
AT2G37160.1 | Symbols: | transducin family protein / WD-40 repe... 50 3e-07
AT3G05090.2 | Symbols: | transducin family protein / WD-40 repe... 50 3e-07
AT3G05090.1 | Symbols: | transducin family protein / WD-40 repe... 50 3e-07
AT3G16650.1 | Symbols: | PP1/PP2A phosphatases pleiotropic regu... 50 4e-07
AT5G51980.1 | Symbols: | WD-40 repeat family protein / zfwd2 pr... 50 4e-07
AT4G29830.1 | Symbols: VIP3 | VIP3 (vernalization independence 3... 50 5e-07
AT1G80670.1 | Symbols: | transducin family protein / WD-40 repe... 49 6e-07
AT1G47610.1 | Symbols: | transducin family protein / WD-40 repe... 49 7e-07
AT3G09080.1 | Symbols: | transducin family protein / WD-40 repe... 49 8e-07
AT1G24130.1 | Symbols: | transducin family protein / WD-40 repe... 49 9e-07
AT4G34380.1 | Symbols: | transducin family protein / WD-40 repe... 49 9e-07
AT2G47410.1 | Symbols: | nucleotide binding | chr2:19449133-194... 49 1e-06
AT5G51980.2 | Symbols: | WD-40 repeat family protein / zfwd2 pr... 49 1e-06
AT5G13840.1 | Symbols: FZR3 | FZR3 (FIZZY-RELATED 3); signal tra... 49 1e-06
AT5G27570.1 | Symbols: | WD-40 repeat family protein | chr5:973... 49 1e-06
AT3G15980.3 | Symbols: | coatomer protein complex, subunit beta... 49 1e-06
AT3G15980.2 | Symbols: | coatomer protein complex, subunit beta... 49 1e-06
AT3G15980.1 | Symbols: | coatomer protein complex, subunit beta... 48 1e-06
AT1G52360.1 | Symbols: | coatomer protein complex, subunit beta... 48 1e-06
AT5G50230.1 | Symbols: | nucleotide binding | chr5:20448632-204... 48 2e-06
AT2G21390.1 | Symbols: | coatomer protein complex, subunit alph... 48 2e-06
AT4G33270.1 | Symbols: CDC20.1 | CDC20.1; signal transducer | ch... 48 2e-06
AT4G33260.1 | Symbols: CDC20.2 | CDC20.2; signal transducer | ch... 48 2e-06
AT1G15470.1 | Symbols: | transducin family protein / WD-40 repe... 47 3e-06
AT5G13480.1 | Symbols: FY | FY; protein binding | chr5:4326638-4... 47 3e-06
AT3G44530.1 | Symbols: HIRA | HIRA (Arabidopsis homolog of histo... 47 3e-06
AT4G00090.1 | Symbols: | transducin family protein / WD-40 repe... 47 3e-06
AT1G79990.1 | Symbols: | protein binding / structural molecule ... 47 3e-06
AT4G25440.1 | Symbols: ZFWD1 | ZFWD1 (zinc finger WD40 repeat pr... 47 3e-06
AT5G27945.1 | Symbols: | transducin family protein / WD-40 repe... 47 4e-06
AT1G79990.5 | Symbols: | protein binding / structural molecule ... 47 4e-06
AT1G79990.3 | Symbols: | protein binding / structural molecule ... 47 4e-06
AT2G22040.1 | Symbols: | transducin family protein / WD-40 repe... 47 5e-06
AT3G53390.2 | Symbols: | transducin family protein / WD-40 repe... 46 6e-06
AT3G53390.1 | Symbols: | transducin family protein / WD-40 repe... 46 6e-06
AT4G04940.1 | Symbols: | transducin family protein / WD-40 repe... 46 6e-06
AT1G15440.1 | Symbols: | transducin family protein / WD-40 repe... 46 7e-06
AT1G15440.2 | Symbols: | transducin family protein / WD-40 repe... 46 8e-06
AT1G62020.1 | Symbols: | coatomer protein complex, subunit alph... 45 9e-06
>AT4G05410.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:2743229-2745521 REVERSE
Length = 504
Score = 182 bits (462), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 83/116 (71%), Positives = 96/116 (82%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
HS++ LALAVSSDGRYLA+GG+DRHVHIWD RTREH+QAFPGHR VSCL FR GTSEL+
Sbjct: 221 HSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELY 280
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQLFKVQK 116
SGSFDR++KVWNVED+A+I GHQ E+L +D LRKER L GRDRTM KV +
Sbjct: 281 SGSFDRTVKVWNVEDKAFITENHGHQGEILAIDALRKERALTVGRDRTMLYHKVPE 336
>AT4G21130.1 | Symbols: EMB2271 | EMB2271 (EMBRYO DEFECTIVE 2271);
nucleotide binding | chr4:11274308-11276286 FORWARD
Length = 479
Score = 170 bits (431), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 99/121 (81%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H+KQ LALAVSSDGRYLA+GG+D HVH+WD RTREH+QAF GH G VS L FR+GT+ELF
Sbjct: 205 HNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHVQAFTGHCGIVSSLCFREGTAELF 264
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQLFKVQKLFIL 120
SGS+D ++ +WN E R YI + FGHQSE+L++D L +ER+L+ GRDRTMQL+KV + L
Sbjct: 265 SGSYDGTLSIWNAEHRTYIESCFGHQSELLSIDALGRERVLSVGRDRTMQLYKVPESTRL 324
Query: 121 V 121
+
Sbjct: 325 I 325
>AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchless
protein, putative | chr5:21401423-21404203 FORWARD
Length = 473
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H + V + S DG+++AS D+ V +W+ T + + F GH GPV +++ + L
Sbjct: 359 HQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLL 418
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVD-CLRKERLLATGRDRTMQLFK 113
SGS D ++K+W + + L GH EV VD E++++ G+DR ++L+K
Sbjct: 419 SGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLWK 472
>AT2G41500.1 | Symbols: LIS, EMB2776 | EMB2776; nucleotide binding |
chr2:17304319-17306855 REVERSE
Length = 554
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFR-QGTSEL 59
H K V ++ S +G +LASGG D IWD R R+ + P H VS + + Q L
Sbjct: 422 HIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFL 481
Query: 60 FSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLAT-GRDRTMQLF 112
+ S+D + +W+ D + + +L GH+S+V ++D +AT DRT++L+
Sbjct: 482 ATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
>AT1G48630.1 | Symbols: RACK1B_AT | RACK1B_AT (RECEPTOR FOR
ACTIVATED C KINASE 1 B); nucleotide binding |
chr1:17981977-17983268 REVERSE
Length = 326
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 8/128 (6%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDT--RTREHIQAFPGHRGPVSCLTFRQGT-- 56
H+K VL++A S+D R + S DR + +W+T + I GH+ VSC+ F T
Sbjct: 104 HTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLV 163
Query: 57 SELFSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLAT-GRDRTMQLFKV- 114
+ S S+D+++KVWN+++ NTL GH + TV L A+ G+D + L+ +
Sbjct: 164 PTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLA 223
Query: 115 --QKLFIL 120
+KL+ L
Sbjct: 224 EGKKLYSL 231
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
HS V + +SSDG++ SG D + +WD T E + F GH V + F ++
Sbjct: 62 HSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIV 121
Query: 61 SGSFDRSIKVWNV--EDRAYINTLFGHQSEVLTVDCLR------KERLLATGRDRTMQLF 112
S S DR+IK+WN E + I+ GH+ V C+R +++ D+T++++
Sbjct: 122 SASRDRTIKLWNTLGECKYTISEADGHKEW---VSCVRFSPNTLVPTIVSASWDKTVKVW 178
Query: 113 KVQK 116
+Q
Sbjct: 179 NLQN 182
>AT3G21540.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:7586100-7590856 REVERSE
Length = 955
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H V AL + G LASG D + +WD + GHR V+ L F G +L
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLV 164
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGR-DRTMQLFKVQK 116
S S D+ ++VW++E + + + GH SEV +VD +ER + TG D+ ++ + V++
Sbjct: 165 SSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAVKE 221
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 5 VLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSF 64
VLA+A+S D +++A LD V ++ + + + GH+ PV C+ + +GS
Sbjct: 543 VLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQ 602
Query: 65 DRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKER-LLATGRDRTMQLFKVQKL 117
D+++K+W ++ ++F H V+ V +R L + G+DR ++ + K
Sbjct: 603 DKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKF 656
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H V+ + +SSDG + +G D+++ IW + ++ H V + F + T LF
Sbjct: 581 HKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLF 640
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGR-DRTMQ 110
S DR +K W+ + ++ TL GH +E+ + + L TG DR+M+
Sbjct: 641 SIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMR 691
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 10 VSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIK 69
SS +A G D + IWDT F H+G V+ L + + S L SGS D I
Sbjct: 72 ASSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDII 131
Query: 70 VWNVEDRAYINTLFGHQSEVLTVDCLR-KERLLATGRDRTMQLFKVQ 115
+W+V + + L GH+ +V + L ++L+++ +D+ ++++ ++
Sbjct: 132 LWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLE 178
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 35/78 (44%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H V+ + + YL S G DR V WD EH+ GH + CL L
Sbjct: 623 HGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLV 682
Query: 61 SGSFDRSIKVWNVEDRAY 78
+GS DRS++ W+ + +
Sbjct: 683 TGSHDRSMRRWDRSEEPF 700
>AT3G18130.1 | Symbols: RACK1C_AT | RACK1C_AT (RECEPTOR FOR
ACTIVATED C KINASE 1 C); nucleotide binding |
chr3:6211109-6212371 REVERSE
Length = 326
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 8/128 (6%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDT--RTREHIQAFPGHRGPVSCLTFRQGT-- 56
H+K VL++A S+D R + S DR + +W+T + I GH+ VSC+ F T
Sbjct: 104 HTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLV 163
Query: 57 SELFSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLAT-GRDRTMQLFKV- 114
+ S S+D+++KVWN+++ N+L GH + TV L A+ G+D + L+ +
Sbjct: 164 PTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLA 223
Query: 115 --QKLFIL 120
+KL+ L
Sbjct: 224 EGKKLYSL 231
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
HS V + +SSDG++ SG D + +WD T E + F GH V + F ++
Sbjct: 62 HSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIV 121
Query: 61 SGSFDRSIKVWNV--EDRAYINTLFGHQSEVLTVDCLR------KERLLATGRDRTMQLF 112
S S DR+IK+WN E + I+ GH+ V C+R +++ D+T++++
Sbjct: 122 SASRDRTIKLWNTLGECKYTISEGDGHKE---WVSCVRFSPNTLVPTIVSASWDKTVKVW 178
Query: 113 KVQK 116
+Q
Sbjct: 179 NLQN 182
>AT3G49660.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:18413690-18415223 FORWARD
Length = 317
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRT-----REHIQAFPGHRGPVSCLTFRQG 55
H++ V ++ SSDGR LAS D+ + + T E +Q F GH +S + F
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSD 82
Query: 56 TSELFSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGR-DRTMQLFKV 114
+ S S D+++K+W+VE + I TL GH + V+ + ++ +G D T++++ V
Sbjct: 83 ARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDV 142
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H + +A SSD R++ S D+ + +WD T I+ GH C+ F ++ +
Sbjct: 70 HENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIV 129
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLAT 103
SGSFD ++++W+V + L H V VD R L+ +
Sbjct: 130 SGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVS 172
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 11 SSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSE---LFSGSFDRS 67
S +G+++ G LD + +W+ + + ++ + GH C++ + + SGS D
Sbjct: 207 SPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNC 266
Query: 68 IKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGR-DRTMQLFKVQK 116
+ +W + + + L GH V+ V C E L+A+G D+T++++ +K
Sbjct: 267 VHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKK 316
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 41/91 (45%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H+ + + + SG D V IWD T + ++ P H PV+ + F + S +
Sbjct: 112 HTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIV 171
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLT 91
S S+D ++W+ + TL ++ ++
Sbjct: 172 SSSYDGLCRIWDSGTGHCVKTLIDDENPPVS 202
>AT2G32700.6 | Symbols: LUH | WD-40 repeat family protein |
chr2:13867235-13871844 FORWARD
Length = 785
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 2 SKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFS 61
+ +V+ + S DG+ LAS G D+ V IW+ T + H ++ + FR +++L +
Sbjct: 508 ASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLAT 567
Query: 62 GSFDRSIKVWNVEDRAY-INTLFGHQSEVLTVD 93
SFD++IK+W+ D Y + T+ GH + V+++D
Sbjct: 568 SSFDKTIKIWDASDPGYFLRTISGHAAPVMSID 600
>AT2G32700.2 | Symbols: LUH | WD-40 repeat family protein |
chr2:13867235-13871844 FORWARD
Length = 787
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 2 SKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFS 61
+ +V+ + S DG+ LAS G D+ V IW+ T + H ++ + FR +++L +
Sbjct: 510 ASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLAT 569
Query: 62 GSFDRSIKVWNVEDRAY-INTLFGHQSEVLTVD 93
SFD++IK+W+ D Y + T+ GH + V+++D
Sbjct: 570 SSFDKTIKIWDASDPGYFLRTISGHAAPVMSID 602
>AT2G32700.1 | Symbols: LUH | WD-40 repeat family protein |
chr2:13867235-13871844 FORWARD
Length = 787
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 2 SKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFS 61
+ +V+ + S DG+ LAS G D+ V IW+ T + H ++ + FR +++L +
Sbjct: 510 ASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLAT 569
Query: 62 GSFDRSIKVWNVEDRAY-INTLFGHQSEVLTVD 93
SFD++IK+W+ D Y + T+ GH + V+++D
Sbjct: 570 SSFDKTIKIWDASDPGYFLRTISGHAAPVMSID 602
>AT2G32700.4 | Symbols: LUH | WD-40 repeat family protein |
chr2:13867235-13871844 FORWARD
Length = 787
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 2 SKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFS 61
+ +V+ + S DG+ LAS G D+ V IW+ T + H ++ + FR +++L +
Sbjct: 510 ASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLAT 569
Query: 62 GSFDRSIKVWNVEDRAY-INTLFGHQSEVLTVD 93
SFD++IK+W+ D Y + T+ GH + V+++D
Sbjct: 570 SSFDKTIKIWDASDPGYFLRTISGHAAPVMSID 602
>AT2G32700.5 | Symbols: LUH | WD-40 repeat family protein |
chr2:13867235-13871844 FORWARD
Length = 787
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 2 SKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFS 61
+ +V+ + S DG+ LAS G D+ V IW+ T + H ++ + FR +++L +
Sbjct: 510 ASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLAT 569
Query: 62 GSFDRSIKVWNVEDRAY-INTLFGHQSEVLTVD 93
SFD++IK+W+ D Y + T+ GH + V+++D
Sbjct: 570 SSFDKTIKIWDASDPGYFLRTISGHAAPVMSID 602
>AT2G32700.3 | Symbols: LUH | WD-40 repeat family protein |
chr2:13867235-13871844 FORWARD
Length = 787
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 2 SKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFS 61
+ +V+ + S DG+ LAS G D+ V IW+ T + H ++ + FR +++L +
Sbjct: 510 ASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLAT 569
Query: 62 GSFDRSIKVWNVEDRAY-INTLFGHQSEVLTVD 93
SFD++IK+W+ D Y + T+ GH + V+++D
Sbjct: 570 SSFDKTIKIWDASDPGYFLRTISGHAAPVMSID 602
>AT2G05720.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:2147192-2148215 FORWARD
Length = 276
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFR-QGTSEL 59
H KQVL++ S +G +LASGG D IWD R R+ + P H VS + + Q L
Sbjct: 171 HIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFL 230
Query: 60 FSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVD 93
+ S D ++ +W+ D + + +L GH+S+V ++D
Sbjct: 231 ATASHDMNVNIWSGRDFSLVKSLVGHESKVASLD 264
>AT1G61210.1 | Symbols: | WD-40 repeat family protein / katanin p80
subunit, putative | chr1:22564785-22571555 FORWARD
Length = 1180
Score = 63.9 bits (154), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 57/112 (50%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
HS+ + + + DGR++ SGGLD V +WD + + F H GP+ L F L
Sbjct: 141 HSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLA 200
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQLF 112
+GS DR++K W++E I + + V ++ R L G D +++++
Sbjct: 201 TGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLFCGLDDSLKVY 252
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H A+ G +LASG D ++ IWD R + IQ + GH +S + F +
Sbjct: 99 HRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVV 158
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGR-DRTMQLFKVQ 115
SG D +KVW++ ++ H+ + ++D E LLATG DRT++ + ++
Sbjct: 159 SGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLE 214
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 49/104 (47%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H+ V ++A S + +G + +WD + ++AF GHR S + F L
Sbjct: 57 HTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLA 116
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATG 104
SGS D ++K+W++ + I T GH + T+ R + +G
Sbjct: 117 SGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSG 160
Score = 46.2 bits (108), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 1 HSKQVLALAVSSD-GRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSEL 59
HS V L++ R +GG D V++W + + GH V + F +
Sbjct: 14 HSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLV 73
Query: 60 FSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATG-RDRTMQLFKVQK 116
+G+ IK+W+VE+ + GH+S V+ LA+G D ++++ ++K
Sbjct: 74 LAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRK 131
>AT1G18080.1 | Symbols: ATARCA, RACK1A_AT | ATARCA; nucleotide
binding | chr1:6222325-6223901 FORWARD
Length = 327
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDT--RTREHI-QAFPGHRGPVSCLTFRQGT- 56
H+K VL++A S D R + S DR + +W+T + I + GHR VSC+ F T
Sbjct: 104 HTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTL 163
Query: 57 -SELFSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLAT-GRDRTMQLFKV 114
+ S S+D+++KVWN+ + +TL GH V TV L A+ G+D + L+ +
Sbjct: 164 QPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDL 223
Query: 115 ---QKLFILVIHLVL 126
+KL+ L + V+
Sbjct: 224 AEGKKLYSLEANSVI 238
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
HS V + +SSDG++ SG D + +WD + F GH V + F ++
Sbjct: 62 HSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIV 121
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLR------KERLLATGRDRTMQLFKV 114
S S DR+IK+WN G + V C+R + +++ D+T++++ +
Sbjct: 122 SASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL 181
Query: 115 QK 116
Sbjct: 182 SN 183
>AT5G23430.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:7894073-7899862 REVERSE
Length = 836
Score = 62.4 bits (150), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H +++ G + ASG LD ++ IWD R + I + GH V+ L F +
Sbjct: 100 HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVV 159
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGR-DRTMQLFKVQ 115
SG D +KVW++ + H+ ++ ++D E LLATG DRT++ + ++
Sbjct: 160 SGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLE 215
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 1 HSKQVLALAVS-SDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSEL 59
HS V L + R L +GG D V++W I + GH + +TF +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 60 FSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGR-DRTMQLFKVQK 116
+G+ +IK+W++E+ + TL GH+S ++VD A+G D ++++ ++K
Sbjct: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
>AT5G23430.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:7894073-7899862 REVERSE
Length = 837
Score = 62.4 bits (150), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H +++ G + ASG LD ++ IWD R + I + GH V+ L F +
Sbjct: 100 HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVV 159
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGR-DRTMQLFKVQ 115
SG D +KVW++ + H+ ++ ++D E LLATG DRT++ + ++
Sbjct: 160 SGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLE 215
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 1 HSKQVLALAVS-SDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSEL 59
HS V L + R L +GG D V++W I + GH + +TF +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 60 FSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGR-DRTMQLFKVQK 116
+G+ +IK+W++E+ + TL GH+S ++VD A+G D ++++ ++K
Sbjct: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
>AT4G15900.1 | Symbols: PRL1 | PRL1 (PLEIOTROPIC REGULATORY LOCUS
1); basal transcription repressor/ nucleotide binding /
protein binding | chr4:9023775-9027443 FORWARD
Length = 486
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H +QV LAVS+ Y+ S G D+ V WD + I+++ GH V CL L
Sbjct: 217 HIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLL 276
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATG-RDRTMQLFKVQ 115
+G D +VW++ + I L GH + V +V + + TG D T++ + ++
Sbjct: 277 TGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLR 332
Score = 53.5 bits (127), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 51/116 (43%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H V LA+ L +GG D +WD RT+ I A GH V + R ++
Sbjct: 259 HLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVV 318
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQLFKVQK 116
+GS D +IK W++ ++TL H+ V + KE A+ + F + K
Sbjct: 319 TGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKKFSLPK 374
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H V ++A + +G DR + IWD T GH V L + +F
Sbjct: 175 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMF 234
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCL----RKERLLATGRDRTMQLFKVQ- 115
S D+ +K W++E I + GH S V CL + LL GRD +++ ++
Sbjct: 235 SAGDDKQVKCWDLEQNKVIRSYHGHLSGVY---CLALHPTLDVLLTGGRDSVCRVWDIRT 291
Query: 116 --KLFILVIH 123
++F L H
Sbjct: 292 KMQIFALSGH 301
>AT5G64730.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:25873146-25875021 FORWARD
Length = 299
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H ++V + V+SD S G DR V+ WD T I+ F GH G V+ + F +S +
Sbjct: 59 HGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVV 118
Query: 61 SGSFDRSIKVWN-----VEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQLFKVQ 115
S FDRS++VW+ VE I+T V+ L K ++ D T++ F ++
Sbjct: 119 SAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVV----LTKTEIIGGSVDGTVRTFDMR 174
>AT1G11160.1 | Symbols: | nucleotide binding | chr1:3733406-3739363
FORWARD
Length = 1021
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 14 GRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKVWNV 73
G +LASG D ++ +WDTR + IQ + GH +S + F + SG D +KVW++
Sbjct: 112 GEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDL 171
Query: 74 EDRAYINTLFGHQSEVLTVDCLRKERLLATGR-DRTMQLFKVQKLFIL 120
++ H+ + ++D E LLATG DRT++ + ++ ++
Sbjct: 172 TAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELI 219
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H++ + + S DGR++ SGGLD V +WD + + F H GP+ L F L
Sbjct: 141 HTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLA 200
Query: 61 SGSFDRSIKVWNVEDRAYINT 81
+GS DR++K W++E I T
Sbjct: 201 TGSADRTVKFWDLETFELIGT 221
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H+ V ++A +S+ + +G + +WD + ++AF GHR S + F L
Sbjct: 57 HTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLA 116
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATG 104
SGS D +++VW+ + I T GH + T++ R + +G
Sbjct: 117 SGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSG 160
>AT3G49180.1 | Symbols: RID3 | RID3 (ROOT INITIATION DEFECTIVE 3);
nucleotide binding | chr3:18229810-18231874 FORWARD
Length = 438
Score = 58.9 bits (141), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 5 VLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSF 64
+ ALA +++G YL GG+ +++W+ T + ++ + GH V+CL F S L SGS
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 65 DRSIKVWNV----ED--RAYINTLFGH 85
D SI+VW++ +D R NTL+ H
Sbjct: 141 DGSIRVWSLIRLFDDFQRQQGNTLYEH 167
>AT5G25150.1 | Symbols: TAF5 | TAF5 (TBP-ASSOCIATED FACTOR 5);
nucleotide binding / transcription regulator |
chr5:8677117-8682058 FORWARD
Length = 669
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H VL+LA+S DGRY+ASG D + +WD T I GH V L++ S L
Sbjct: 543 HRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLA 602
Query: 61 SGSFDRSIKVWNV 73
SGS D ++K+W+V
Sbjct: 603 SGSADCTVKLWDV 615
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 15 RYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKVWNVE 74
Y+A+G D+ V +WD +T E ++ F GHR V L + SG D +I +W++
Sbjct: 515 NYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLS 574
Query: 75 DRAYINTLFGHQSEVLTVDCLRKERLLATGR-DRTMQLFKV 114
I L GH S V ++ + LLA+G D T++L+ V
Sbjct: 575 TARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDV 615
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H+ V S G Y AS DR IW + ++ GH V C+ + + +
Sbjct: 459 HNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIA 518
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATG-RDRTMQLFKV 114
+GS D+++++W+V+ + GH+S VL++ R +A+G D T+ ++ +
Sbjct: 519 TGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDL 573
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
HS V + S G ++ S D + +W T+ ++ + GH PV F
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFA 476
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATG-RDRTMQLFKVQ---- 115
S S DR+ ++W+++ + + GH S+V V +ATG D+T++L+ VQ
Sbjct: 477 SCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGEC 536
Query: 116 -KLFILVIHLVLTI 128
++FI +VL++
Sbjct: 537 VRIFIGHRSMVLSL 550
>AT4G32551.1 | Symbols: LUG, RON2 | LUG (LEUNIG); protein binding /
protein heterodimerization/ transcription repressor |
chr4:15707863-15713359 FORWARD
Length = 931
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 2 SKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFS 61
+ +V SSDG+ LAS G D+ +W T T + H ++ + F L +
Sbjct: 651 TTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLAT 710
Query: 62 GSFDRSIKVWNVEDRAY-INTLFGHQSEVLTVD 93
SFD++++VW+ +++ Y + T GH S V ++D
Sbjct: 711 SSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLD 743
>AT5G08390.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046), WD40 repeat, region
(InterPro:IPR017986), WD40/YVTN repeat-like
(InterPro:IPR015943), WD40 repeat (InterPro:IPR001680);
BEST Arabidopsis thaliana protein match is: transducin
family protein / WD-40 repeat family protein
(TAIR:AT5G23430.1); Has 84267 Blast hits to 30722
proteins in 748 species: Archae - 68; Bacteria - 7813;
Metazoa - 39755; Fungi - 16342; Plants - 8110; Viruses -
6; Other Eukaryotes - 12173 (source: NCBI BLink). |
chr5:2701448-2706910 FORWARD
Length = 839
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 14 GRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKVWNV 73
G + ASG LD ++ IWD R + I + GH V+ L F + SG D +KVW++
Sbjct: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDL 172
Query: 74 EDRAYINTLFGHQSEVLTVDCLRKERLLATGR-DRTMQLFKVQKLFIL 120
++ H+ ++ ++D E LLATG D+T++ + ++ ++
Sbjct: 173 TAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELI 220
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 1 HSKQVLALAVS-SDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSEL 59
HS V L + R L +GG D V++W I + GH + +TF +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 74
Query: 60 FSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGR-DRTMQLFKVQK 116
+G+ +IK+W++E+ + TL GH+S ++V+ A+G D ++++ ++K
Sbjct: 75 AAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK 132
>AT1G24530.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:8693287-8694543 FORWARD
Length = 418
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREH----IQAFPGHRGPVSCLTFRQGT 56
H V A+AVS++G + +G DR + +W T E + H+ V+ L
Sbjct: 234 HDDAVNAIAVSTNG-TVYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDG 292
Query: 57 SELFSGSFDRSIKVWNVEDR----AYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQLF 112
S LFSGS DRSI VW ED A L GH +L++ + + LL+ DRT++++
Sbjct: 293 SVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSLFNV-SDLLLSGSADRTVRIW 351
Query: 113 K 113
+
Sbjct: 352 R 352
>AT4G02730.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:1207759-1209066 FORWARD
Length = 333
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTR-EHIQAFPGHRGPVSCLTFRQGTSEL 59
HS + LA SSD Y S D + IWD R+ E ++ GH V C+ F ++ +
Sbjct: 84 HSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLI 143
Query: 60 FSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATG 104
SGSFD +I++W V+ + + H + +V R L+ +
Sbjct: 144 VSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSA 188
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 60/146 (41%), Gaps = 15/146 (10%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H+ V + + + SG D + IW+ +T + ++ H P+S + F + S +
Sbjct: 127 HTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIV 186
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSE---------------VLTVDCLRKERLLATGR 105
S S D S K+W+ ++ + TL +S V T+D K ATG+
Sbjct: 187 SASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGK 246
Query: 106 DRTMQLFKVQKLFILVIHLVLTIKKW 131
+ K+F + +T K+
Sbjct: 247 FLKVYTGHTNKVFCITSAFSVTNGKY 272
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H+ + + S+DG LAS +D+ + +W I + GH +S L + +
Sbjct: 42 HTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTC 101
Query: 61 SGSFDRSIKVWNV-EDRAYINTLFGHQSEVLTVDCLRKERLLATGR-DRTMQLFKVQ 115
S S D ++++W+ + L GH + V V+ L+ +G D T+++++V+
Sbjct: 102 SASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVK 158
>AT1G71840.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:27022424-27024380 FORWARD
Length = 407
Score = 55.5 bits (132), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 49/106 (46%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H V LA S DG+ LASGGLD V I+D + G + + + +
Sbjct: 112 HKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVL 171
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGRD 106
+GS D S+ +WN + AY+N GH V D +L+ TG D
Sbjct: 172 AGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSD 217
>AT5G16750.1 | Symbols: TOZ | TOZ (TORMOZEMBRYO DEFECTIVE);
nucleotide binding | chr5:5504541-5509266 REVERSE
Length = 876
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSE-- 58
H V+ +A + G LA+ G DR V +WD F GH+G VS + F +++
Sbjct: 101 HEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNI 160
Query: 59 LFSGSFDRSIKVWNVE----DRAYINTLFGHQSEVLTVDCLRKE--RLLATGRDRTMQLF 112
L SGS D +++VW++ ++ + + H S V ++ L ++ L + GRD+ + L+
Sbjct: 161 LISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSI-ALSEDGLTLFSAGRDKVVNLW 219
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
S + ALA+S D + L S G R + +WD T + I+++ GH GPV + L
Sbjct: 59 ESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLA 118
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTV 92
+ DR + VW+V+ + GH+ V ++
Sbjct: 119 TAGADRKVLVWDVDGGFCTHYFRGHKGVVSSI 150
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 19/140 (13%)
Query: 1 HSKQVLAL--AVSSDGRYL-ASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTS 57
H + VL+L VSS G L +G D+ V +W+ ++ I GH G + + F + +
Sbjct: 400 HKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSF 459
Query: 58 ELF-SGSFDRSIKVWNV-----EDRAYIN-----TLFGHQSEVLTVDCLRKERLLATG-R 105
F SGS DR++KVW++ + IN + H ++ +V R + L+ TG
Sbjct: 460 SFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSE 519
Query: 106 DRTMQLFKVQKLFILVIHLV 125
DRT ++++ L +H+V
Sbjct: 520 DRTASIWRLPDL----VHVV 535
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H K + ++AV+ + + +G DR IW H+ GH+ + + F +
Sbjct: 498 HDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVM 557
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRK-ERLLATGRDRTMQLFKVQ 115
+ S D+++K+W + D + + T GH S VL + + ++ G D ++L+ V
Sbjct: 558 TASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVN 613
>AT1G49040.1 | Symbols: SCD1 | SCD1 (STOMATAL CYTOKINESIS-DEFECTIVE
1); protein binding | chr1:18139419-18148826 REVERSE
Length = 1187
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 13 DGRYLASGGLDRHVHIWDTRTR--EHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKV 70
D + SG D V IWD R E GH G V ++ +G ++ SGS D S+ V
Sbjct: 866 DAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAISSDRG--KIVSGSDDLSVIV 923
Query: 71 WNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQLFKVQ 115
W+ + + L GH S+V V L ER+L D T++++ V+
Sbjct: 924 WDKQTTQLLEELKGHDSQVSCVKMLSGERVLTAAHDGTVKMWDVR 968
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 9 AVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSI 68
A+SSD + SG D V +WD +T + ++ GH VSC+ G + + + D ++
Sbjct: 904 AISSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSG-ERVLTAAHDGTV 962
Query: 69 KVWNVEDRAYINTLFGHQSEVLTVDCLRKERLL-ATGRDRTMQLFKVQ 115
K+W+V + T+ S +L+++ +L A GRD ++ ++
Sbjct: 963 KMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIR 1010
>AT5G50120.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:20382630-20383796 REVERSE
Length = 388
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 12/83 (14%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREH--IQAFPGHRGPVSCLT--FR--- 53
H++ VL LAV SD L SG D+ V +W +++ + GH GPV CLT FR
Sbjct: 304 HTESVLCLAVVSD--ILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFRDSR 361
Query: 54 ---QGTSELFSGSFDRSIKVWNV 73
+ + ++SG D +KVW V
Sbjct: 362 KADEASYHIYSGGLDSQVKVWQV 384
>AT2G32950.1 | Symbols: COP1, ATCOP1, DET340, FUS1, EMB168 | COP1
(CONSTITUTIVE PHOTOMORPHOGENIC 1); protein binding /
ubiquitin-protein ligase | chr2:13978000-13983282
FORWARD
Length = 675
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 14 GRYLASGGLDRHVHIWDTRT-REHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKVWN 72
Y+A G D H+H +D R + + F GH+ VS + F +EL S S D ++++W+
Sbjct: 518 SNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFL-SNNELASASTDSTLRLWD 576
Query: 73 VEDRAYINTLFGHQSEVLTVDCLRKERLLATGRD 106
V+D + T GH +E V LA G +
Sbjct: 577 VKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSE 610
>AT5G67320.1 | Symbols: HOS15 | HOS15 (high expression of
osmotically responsive genes 15) |
chr5:26857268-26860974 FORWARD
Length = 613
Score = 52.8 bits (125), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 17 LASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKVWNVEDR 76
LAS D V +WD + + +F GHR PV L F + SGS D+SI +W++++
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEG 573
Query: 77 AYINTLFGH 85
+ T G+
Sbjct: 574 KIVKTYTGN 582
Score = 52.4 bits (124), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Query: 2 SKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFS 61
SK V L + +G LA+G D IW T E I H+GP+ L + + L +
Sbjct: 324 SKDVTTLDWNGEGTLLATGSCDGQARIW-TLNGELISTLSKHKGPIFSLKWNKKGDYLLT 382
Query: 62 GSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQLFKV 114
GS DR+ VW+V+ + H L VD + D + L K+
Sbjct: 383 GSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKI 435
Score = 49.3 bits (116), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H + +L + G YL +G +DR +WD + E Q F H GP + +R S
Sbjct: 364 HKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVS-FA 422
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLAT-GRDRTMQLFKVQK 116
+ S D I + + + T GHQ EV V LLA+ D T +++ +++
Sbjct: 423 TSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQ 479
>AT1G73720.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:27725059-27729722 FORWARD
Length = 511
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H VL + S D LASG D + IW RT I+ F H V+ L+F + S+L
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLL 321
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEV 89
S SFD++ ++ ++ + GH S V
Sbjct: 322 STSFDQTARIHGLKSGKLLKEFRGHTSYV 350
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 11 SSDGRYLASGGLDRHVHIWDT---RTREHIQ-----AFPGHRGPVSCLTFRQGTSELFSG 62
S DG++LAS +D + +WD + ++ +Q +F H PV C+ F + + L SG
Sbjct: 222 SPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASG 281
Query: 63 SFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRK-ERLLATGRDRTMQL 111
S D IK+W + I H V ++ R +LL+T D+T ++
Sbjct: 282 SQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARI 331
>AT2G43770.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:18134272-18135303 REVERSE
Length = 343
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPV-SCLTFRQGTSEL 59
H +L L +SDG + S D+ V WD T + I+ H V SC R+G +
Sbjct: 95 HKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLI 154
Query: 60 FSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVD-CLRKERLLATGRDRTMQLFKVQK 116
SGS D + K+W++ R I T F + ++ V +++ G D ++++ ++K
Sbjct: 155 ISGSDDGTAKLWDMRQRGAIQT-FPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRK 211
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%)
Query: 3 KQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSG 62
K +L + S DG + +G DR VHIWDT +R I PGH G V+ F + S
Sbjct: 273 KNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSC 332
Query: 63 SFDRSI 68
S D++I
Sbjct: 333 SSDKNI 338
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 17 LASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKVWNVEDR 76
+ SG D +WD R R IQ FP + ++ ++F ++F+G D +KVW++
Sbjct: 154 IISGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKG 212
Query: 77 AYINTLFGHQSEVLTVD-CLRKERLLATGRDRTMQLFKVQK 116
TL GHQ + + LL G D + ++ ++
Sbjct: 213 EATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRP 253
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRT----REHIQAFPGH-----RGPVSCLT 51
H + +++S DG YL + G+D + +WD R ++ F GH + + C
Sbjct: 221 HQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSW 280
Query: 52 FRQGTSELFSGSFDRSIKVWNVEDRAYINTLFGHQSEV 89
GT ++ +GS DR + +W+ R I L GH V
Sbjct: 281 SPDGT-KVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSV 317
>AT2G37160.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:15609047-15612529 FORWARD
Length = 544
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%)
Query: 7 ALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDR 66
++A S+DG YLA+ G D ++ I+D T++ + + G + C + L +G D
Sbjct: 308 SIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDD 367
Query: 67 SIKVWNVEDRAYINTLFGHQSEV 89
++VW++EDR + GH S V
Sbjct: 368 LVQVWSMEDRKVVAWGEGHNSWV 390
>AT2G37160.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:15609047-15612529 FORWARD
Length = 544
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 45/83 (54%)
Query: 7 ALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDR 66
++A S+DG YLA+ G D ++ I+D T++ + + G + C + L +G D
Sbjct: 308 SIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDD 367
Query: 67 SIKVWNVEDRAYINTLFGHQSEV 89
++VW++EDR + GH S V
Sbjct: 368 LVQVWSMEDRKVVAWGEGHNSWV 390
>AT3G05090.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:1418573-1422723 REVERSE
Length = 753
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H + V ALA++ G L SGG ++ + +WD RT GH V L
Sbjct: 212 HKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCL 271
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRK-ERLLATGRDRTMQL 111
SGS D I++W++ + ++T H V + C + + GRD+ + L
Sbjct: 272 SGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
>AT3G05090.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:1418573-1422723 REVERSE
Length = 753
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H + V ALA++ G L SGG ++ + +WD RT GH V L
Sbjct: 212 HKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCL 271
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRK-ERLLATGRDRTMQL 111
SGS D I++W++ + ++T H V + C + + GRD+ + L
Sbjct: 272 SGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
>AT3G16650.1 | Symbols: | PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) | chr3:5671133-5675106 FORWARD
Length = 479
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H QV LAVS+ Y+ S G D+ V WD + I+++ GH V CL +
Sbjct: 211 HIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVL 270
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGR-DRTMQLFKVQ 115
+G D +VW++ + I L H S+V +V + + TG D T++ + ++
Sbjct: 271 TGGRDSVCRVWDIRTKMQIFVL-PHDSDVFSVLARPTDPQVITGSHDSTIKFWDLR 325
>AT5G51980.1 | Symbols: | WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative | chr5:21113650-21115902
REVERSE
Length = 437
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 4 QVLALAVSSDGRYLASGGLDRHVHIWD----TRTREHIQAFPGHRGPVSCLTFRQGTSEL 59
QV +L V +D L +G D + W T E + GH ++ +T G + L
Sbjct: 232 QVYSLVVGTD--LLFAGTQDGSILAWRYNAATNCFEPSASLTGH--TLAVVTLYVGANRL 287
Query: 60 FSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQLF 112
+SGS D++IKVW++++ I TL H S V+++ C + LL+ D T++++
Sbjct: 288 YSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICW-DQFLLSCSLDNTVKIW 339
>AT4G29830.1 | Symbols: VIP3 | VIP3 (vernalization independence 3);
nucleotide binding / protein binding |
chr4:14597728-14599157 FORWARD
Length = 321
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 1 HSKQVLALAVSS-DGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSEL 59
H+ V +L S D R L SG D HV++ D + + + GH V + +
Sbjct: 199 HNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAI 258
Query: 60 FSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTV-------DCLRKERLLATGRDRTMQLF 112
+GS DR++++W+++ RA I T+ H +V +V +R RL + D+++ L+
Sbjct: 259 ATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTGVRAGRLASVSDDKSVSLY 318
>AT1G80670.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:30320809-30323543 REVERSE
Length = 349
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H + VL A DG + SGG D+ +W + H GP++ + + G + L
Sbjct: 71 HDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLA 130
Query: 61 SGSFDRSIKVWNVEDRAYINT-LFGHQSEVLTVDCLRKERLLATG-RDRTMQLFKVQK 116
+GS+D+++K W+ + ++T + L+V K L+ G DR + +F +Q
Sbjct: 131 TGSWDKTLKYWDTRQQNPVHTQQLPDKCYTLSV----KHPLMVVGTADRNLIVFNLQN 184
>AT1G47610.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:17504836-17505891 FORWARD
Length = 351
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Query: 8 LAVSSDGRYLASGGLDRHVHIWDTRTREH--IQAFPGHRGPVSCLTFRQGTSE------- 58
L +++ G+ L SG D+ + +W + H + GH GPV CL + +
Sbjct: 270 LCIAAAGKLLFSGAADKKICVWRREGKVHTCVSVLTGHTGPVKCLAVVEPSGGEEEDGGD 329
Query: 59 ----LFSGSFDRSIKVWNV 73
L+SGS D+S+KVW V
Sbjct: 330 GRLVLYSGSLDKSVKVWRV 348
>AT3G09080.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:2776259-2781785 REVERSE
Length = 1026
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 7 ALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTF----------RQGT 56
ALAVS DG+YLA+G ++HI+D + E+ H + L+F +
Sbjct: 390 ALAVSEDGKYLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQSLSFSFPVLTNVDSENAS 449
Query: 57 SELFSGSFDRSIKVWNVEDRAY--INTLFGHQSEVLTVDCLRKERLLATGRDRTMQLFKV 114
S L SG R+I +++V+ R + + ++ G + ++L +G DR +Q+F V
Sbjct: 450 SLLASGGKGRAIHIYDVK-RNFDPVGSVCGSAAVTSVKFACNGRKMLTSGADR-LQMFDV 507
Query: 115 QK 116
+
Sbjct: 508 NR 509
>AT1G24130.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:8534183-8535430 REVERSE
Length = 415
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 64/123 (52%), Gaps = 12/123 (9%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREH--IQAFPGHRGPVSCLTFRQGTSE 58
H + A+ VS DG ++ +G D+ + +W+ + ++H + H V+ L +
Sbjct: 234 HDDAINAIVVSKDG-FVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKV 292
Query: 59 LFSGSFDRSIKVW----NVEDR----AYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQ 110
L+SG+ DRSI VW N +D + + L GH+ ++ + + + +L+ D++++
Sbjct: 293 LYSGACDRSILVWERLINGDDEELHMSVVGALRGHRKAIMCL-AVASDLVLSGSADKSLR 351
Query: 111 LFK 113
+++
Sbjct: 352 VWR 354
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 15/102 (14%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREH--------IQAFPGHRGPVSCLTF 52
H V ALA+S DG+ L SG DR + +W+ + A GHR + CL
Sbjct: 277 HLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEELHMSVVGALRGHRKAIMCLAV 336
Query: 53 RQGTSELFSGSFDRSIKVWN---VEDRAY--INTLFGHQSEV 89
+ + SGS D+S++VW +E Y + L GH V
Sbjct: 337 --ASDLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPV 376
>AT4G34380.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:16438835-16440322 FORWARD
Length = 495
Score = 48.9 bits (115), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 22/96 (22%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIW--DTRTREH--IQAFPGHRGPVSCLTFR--- 53
H VL L ++ G L SG D+++ +W D + H + GH GPV CL
Sbjct: 366 HKSAVLCLGIA--GNLLLSGSADKNICVWRRDPSDKSHQCLSVLTGHMGPVKCLAVEEER 423
Query: 54 ---QGTSE----------LFSGSFDRSIKVWNVEDR 76
QG ++SGS D+S+KVW V +R
Sbjct: 424 ACHQGAKASVAEGDRKWIIYSGSLDKSVKVWRVSER 459
>AT2G47410.1 | Symbols: | nucleotide binding |
chr2:19449133-19456991 FORWARD
Length = 1520
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H V GRY+ +G DR V IW T + + GH G ++ L + +
Sbjct: 235 HRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVA 294
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKE----RLLATGRDRTMQLFKVQ 115
S S D I+VW + D I+ L GH V + ++ +LL++ D T +++ +
Sbjct: 295 SASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDAR 353
>AT5G51980.2 | Symbols: | WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative | chr5:21113650-21115902
REVERSE
Length = 443
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 4 QVLALAVSSDGRYLASGGLDRHVHIW----DTRTREHIQAFPGHRGPVSCLTFRQGTSEL 59
QV +L V +D L +G D + W T E + GH ++ +T G + L
Sbjct: 232 QVYSLVVGTD--LLFAGTQDGSILAWRYNAATNCFEPSASLTGHT--LAVVTLYVGANRL 287
Query: 60 FSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQLFKV 114
+SGS D++IKVW++++ I TL H S V+++ C + LL+ D T++++
Sbjct: 288 YSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICW-DQFLLSCSLDNTVKIWAA 341
>AT5G13840.1 | Symbols: FZR3 | FZR3 (FIZZY-RELATED 3); signal
transducer | chr5:4468677-4470706 REVERSE
Length = 481
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H +V L S D R LASGG D + +W+ +++ I H V +T+ S L
Sbjct: 297 HKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLL 356
Query: 61 S---GSFDRSIKVWNVEDRAYINTL 82
+ G+ DR I+ WN + +N++
Sbjct: 357 ASGGGTADRCIRFWNTTNGNQLNSI 381
>AT5G27570.1 | Symbols: | WD-40 repeat family protein |
chr5:9734896-9736131 REVERSE
Length = 411
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 59/131 (45%), Gaps = 11/131 (8%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTR-------TREHIQAFPGHRGPVSCLTFR 53
H+++V L S G+ LASGG D VHIWD R TR+ + F H V L +
Sbjct: 217 HTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWC 276
Query: 54 QGTSELFS---GSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQ 110
+ L + G D IK WN A +N++ S+V ++ + ER L + T
Sbjct: 277 PFQASLLATGGGVGDGKIKFWNTHTGACLNSV-ETGSQVCSLLWSKSERELLSSHGFTQN 335
Query: 111 LFKVQKLFILV 121
+ K +V
Sbjct: 336 QLTLWKYPSMV 346
>AT3G15980.3 | Symbols: | coatomer protein complex, subunit beta 2
(beta prime), putative | chr3:5412015-5418313 REVERSE
Length = 918
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 1 HSKQVLALAVS-SDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSE- 58
HS V+ + + D AS LDR + IW+ + + H+ V+C+ + G +
Sbjct: 141 HSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200
Query: 59 -LFSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKE 98
L +GS D + KVW+ + ++ + TL GH V V C E
Sbjct: 201 YLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAV-CFHPE 240
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 46/104 (44%)
Query: 13 DGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKVWN 72
D YL +G D +WD +T+ +Q GH VS + F + +GS D ++++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Query: 73 VEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQLFKVQK 116
NTL V + ++ R + G D + K+ +
Sbjct: 258 ATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLGR 301
>AT3G15980.2 | Symbols: | coatomer protein complex, subunit beta 2
(beta prime), putative | chr3:5412015-5418313 REVERSE
Length = 918
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 1 HSKQVLALAVS-SDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSE- 58
HS V+ + + D AS LDR + IW+ + + H+ V+C+ + G +
Sbjct: 141 HSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200
Query: 59 -LFSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKE 98
L +GS D + KVW+ + ++ + TL GH V V C E
Sbjct: 201 YLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAV-CFHPE 240
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 46/104 (44%)
Query: 13 DGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKVWN 72
D YL +G D +WD +T+ +Q GH VS + F + +GS D ++++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Query: 73 VEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQLFKVQK 116
NTL V + ++ R + G D + K+ +
Sbjct: 258 ATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLGR 301
>AT3G15980.1 | Symbols: | coatomer protein complex, subunit beta 2
(beta prime), putative | chr3:5411699-5418313 REVERSE
Length = 909
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 1 HSKQVLALAVS-SDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSE- 58
HS V+ + + D AS LDR + IW+ + + H+ V+C+ + G +
Sbjct: 141 HSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200
Query: 59 -LFSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKE 98
L +GS D + KVW+ + ++ + TL GH V V C E
Sbjct: 201 YLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAV-CFHPE 240
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 46/104 (44%)
Query: 13 DGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKVWN 72
D YL +G D +WD +T+ +Q GH VS + F + +GS D ++++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Query: 73 VEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQLFKVQK 116
NTL V + ++ R + G D + K+ +
Sbjct: 258 ATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLGR 301
>AT1G52360.1 | Symbols: | coatomer protein complex, subunit beta 2
(beta prime), putative | chr1:19499282-19505397 FORWARD
Length = 926
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 1 HSKQVLALAVS-SDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSE- 58
HS V+ + + D AS LDR + IW+ + + H+ V+C+ + G +
Sbjct: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200
Query: 59 -LFSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKE 98
L +GS D + KVW+ + ++ + TL GH V V C E
Sbjct: 201 YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAV-CFHPE 240
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 46/104 (44%)
Query: 13 DGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKVWN 72
D YL +G D +WD +T+ +Q GH VS + F + +GS D ++++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Query: 73 VEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQLFKVQK 116
NTL V + ++ R + G D + K+ +
Sbjct: 258 ATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLGR 301
>AT5G50230.1 | Symbols: | nucleotide binding |
chr5:20448632-20450855 REVERSE
Length = 509
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 1 HSKQVLALAVSS-DGRYLASGGLDRHVHIWDTRTR--EHIQAFPGHRGPVSCLTFRQGTS 57
H+ +V A+ VS R++ S DR + +WD + F + + CL+ T
Sbjct: 308 HTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAI-CLSIDGLT- 365
Query: 58 ELFSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRK-ERLLATGRDRTMQLFKVQK 116
+FSG D ++++W+++ ++ + GH S V +V R R+L +GRD +F +
Sbjct: 366 -VFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRT 424
Query: 117 LFI 119
L I
Sbjct: 425 LEI 427
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 17 LASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKVWNVEDR 76
L +GG DR V +WDT + I++ G G + + + + + ++ VW+V
Sbjct: 240 LFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSG 299
Query: 77 AYINTLFGHQSEVLTVDCLR--KERLLATGRDRTMQLFKVQKLF 118
+TL GH +V VD + +++ DRT++L+ + K +
Sbjct: 300 RVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGY 343
>AT2G21390.1 | Symbols: | coatomer protein complex, subunit alpha,
putative | chr2:9152428-9156577 FORWARD
Length = 1218
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 17 LASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKVWNVEDR 76
SGG D + +W+ +T + GH + + F + S S D++I++WN + R
Sbjct: 66 FVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSR 125
Query: 77 AYINTLFGHQSEVLTVDCLRKERLLATGR-DRTMQLFKVQKL 117
I+ L GH V+ KE L+ + D+T++++ + L
Sbjct: 126 TCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGAL 167
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Query: 17 LASGGLDRHVHIW---DTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKVWNV 73
+ SG DR V +W +T+ E + GH VS + F + S S D+SI+VW+
Sbjct: 219 IVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDA 277
Query: 74 EDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQLFKVQK 116
R I T + + LLA G D M +FK+++
Sbjct: 278 TKRTGIQTFRREHDRFWILAVHPEINLLAAGHDNGMIVFKLER 320
>AT4G33270.1 | Symbols: CDC20.1 | CDC20.1; signal transducer |
chr4:16044545-16046590 REVERSE
Length = 457
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWD------TRTREHIQAFPGHRGPVSCLTFRQ 54
H+++V L S G+ LASGG D VHIWD T + + H V L +
Sbjct: 265 HTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCP 324
Query: 55 GTSELFS---GSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQL 111
+ L + G DR+IK WN A +N++ S+V ++ + ER L + T
Sbjct: 325 FQANLLATGGGGGDRTIKFWNTHTGACLNSV-DTGSQVCSLLWSKNERELLSSHGFTQNQ 383
Query: 112 FKVQKLFILVIHLVLT 127
+ K +V LT
Sbjct: 384 LTLWKYPSMVKMAELT 399
>AT4G33260.1 | Symbols: CDC20.2 | CDC20.2; signal transducer |
chr4:16041233-16043180 REVERSE
Length = 447
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWD------TRTREHIQAFPGHRGPVSCLTFRQ 54
H+++V L S G+ LASGG D VHIWD T + + H V L +
Sbjct: 255 HTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCP 314
Query: 55 GTSELFS---GSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQL 111
+ L + G DR+IK WN A +N++ S+V ++ + ER L + T
Sbjct: 315 FQANLLATGGGGGDRTIKFWNTHTGACLNSV-DTGSQVCSLLWSKNERELLSSHGFTQNQ 373
Query: 112 FKVQKLFILVIHLVLT 127
+ K +V LT
Sbjct: 374 LTLWKYPSMVKMAELT 389
>AT1G15470.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:5315838-5317696 FORWARD
Length = 333
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 14 GRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKVWNV 73
G +GG D VH +D +T E I GH GPV C+ + G SGS D ++++W V
Sbjct: 235 GNTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIWVV 294
>AT5G13480.1 | Symbols: FY | FY; protein binding |
chr5:4326638-4331557 REVERSE
Length = 647
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 17 LASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKVWNVEDR 76
L SGG D+ V +WDTR+ + + GH+ V + + Q + L + S D+ IK++++
Sbjct: 264 LVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTM 323
Query: 77 AYINTLFGHQSEVLTV 92
+ + GH +V ++
Sbjct: 324 KELQSFRGHTKDVTSL 339
>AT3G44530.1 | Symbols: HIRA | HIRA (Arabidopsis homolog of histone
chaperone HIRA); nucleotide binding / protein binding |
chr3:16116026-16121247 FORWARD
Length = 1058
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H+ V+ L S D LASG LD VHIW+ RT GH V +T+ S +
Sbjct: 124 HTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIA 183
Query: 61 SGSFDRSIKVWNVEDRAYINTLFGHQSEVL 90
S S D+++ +W D + GH ++ L
Sbjct: 184 SQSDDKTVIIWRTSDWGMAHRTDGHWAKSL 213
>AT4G00090.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:34234-36594 FORWARD
Length = 430
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 9 AVSSDGRYLASGGLDRHVHIW------DTRTRE--HIQAFPGHRGPVSCLTFRQGTSELF 60
AVS +GR+LA+ V +W D +E + GH+ V+ L F + ++
Sbjct: 246 AVSPNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQII 305
Query: 61 SGSFDRSIKVWNVEDRAYIN 80
+ S D SI+VWN+ R +++
Sbjct: 306 TASKDGSIRVWNINVRYHLD 325
>AT1G79990.1 | Symbols: | protein binding / structural molecule |
chr1:30084522-30091949 FORWARD
Length = 1135
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 1 HSKQVLALAVSS-DGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSE- 58
HS V+ + + D AS LDR + IW+ + + H V+C+ + G +
Sbjct: 356 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKP 415
Query: 59 -LFSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGRD 106
L +GS D + KVW+ + ++ + TL GH V V + ++ TG +
Sbjct: 416 YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSE 464
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 47/104 (45%)
Query: 13 DGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKVWN 72
D YL +G D +WD +T+ +Q GH VS ++F + +GS D ++++W+
Sbjct: 413 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWH 472
Query: 73 VEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQLFKVQK 116
NTL V + ++ R + G D + K+ +
Sbjct: 473 ATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSIMVKLGR 516
>AT4G25440.1 | Symbols: ZFWD1 | ZFWD1 (zinc finger WD40 repeat
protein 1); nucleic acid binding / zinc ion binding |
chr4:13007107-13009381 REVERSE
Length = 430
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 4 QVLALAVSSDGRYLASGGLDRHVHIW----DTRTREHIQAFPGHRGPVSCLTFRQGTSEL 59
QV +L V +D L +G D + +W T + + GH ++ ++ G + L
Sbjct: 225 QVYSLVVGTD--LLFAGTQDGSILVWRYNSTTSCFDPAASLLGH--TLAVVSLYVGANRL 280
Query: 60 FSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQLF 112
+SG+ D SIKVW++++ I TL H S V+++ C + LL+ D T++++
Sbjct: 281 YSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICW-DQFLLSCSLDNTVKIW 332
>AT5G27945.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:9976007-9977601 FORWARD
Length = 428
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWD------TRTREHIQAFPGHRGPVSCLTFRQ 54
H+++V L S G+ LASGG D VHIWD TR+ + F H V L +
Sbjct: 235 HTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCP 294
Query: 55 GTSELFS---GSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQL 111
+ L + G D I WN A +N++ S+V ++ + ER L + T
Sbjct: 295 FQASLLATGGGVGDGKINFWNTHTGACLNSV-ETGSQVCSLLWSKSERELLSAHGFTQNQ 353
Query: 112 FKVQKLFILV 121
+ K +V
Sbjct: 354 LTLWKYPSMV 363
>AT1G79990.5 | Symbols: | protein binding / structural molecule |
chr1:30085910-30091949 FORWARD
Length = 912
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 1 HSKQVLALAVSS-DGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSE- 58
HS V+ + + D AS LDR + IW+ + + H V+C+ + G +
Sbjct: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKP 200
Query: 59 -LFSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATGRD 106
L +GS D + KVW+ + ++ + TL GH V V + ++ TG +
Sbjct: 201 YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSE 249
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%)
Query: 13 DGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKVWN 72
D YL +G D +WD +T+ +Q GH VS ++F + +GS D ++++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWH 257
Query: 73 VEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQLFKV 114
NTL V + ++ R + G D + K+
Sbjct: 258 ATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSIMVKL 299
>AT1G79990.3 | Symbols: | protein binding / structural molecule |
chr1:30085910-30091949 FORWARD
Length = 920
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 1 HSKQVLALAVSS-DGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSE- 58
HS V+ + + D AS LDR + IW+ + + H V+C+ + G +
Sbjct: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKP 200
Query: 59 -LFSGSFDRSIKVWNVEDRAYINTLFGHQSEVLTVDCLRKERLLATG-RDRTMQLF 112
L +GS D + KVW+ + ++ + TL GH V V + ++ TG D T++++
Sbjct: 201 YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%)
Query: 13 DGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKVWN 72
D YL +G D +WD +T+ +Q GH VS ++F + +GS D ++++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWH 257
Query: 73 VEDRAYINTLFGHQSEVLTVDCLRKERLLATGRDRTMQLFKV 114
NTL V + ++ R + G D + K+
Sbjct: 258 ATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSIMVKL 299
>AT2G22040.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:9374576-9376260 REVERSE
Length = 312
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 1 HSKQVLALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELF 60
H+K V+A+ G + SG D V IWD R RE + F PV+ + +EL
Sbjct: 83 HTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRS-VSPVNTVVLHPNQTELI 141
Query: 61 SGSFDRSIKVWNV 73
SG + +I+VW++
Sbjct: 142 SGDQNGNIRVWDL 154
>AT3G53390.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:19792781-19796428 FORWARD
Length = 558
Score = 46.2 bits (108), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 46/83 (55%)
Query: 7 ALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDR 66
++A S+DG +LA+ G D ++ I+D T++ + + G + C ++ + +G D
Sbjct: 308 SIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGEDD 367
Query: 67 SIKVWNVEDRAYINTLFGHQSEV 89
++VW++EDR + GH S V
Sbjct: 368 LVQVWSMEDRKVVAWGEGHNSWV 390
>AT3G53390.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:19792781-19796428 FORWARD
Length = 558
Score = 46.2 bits (108), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 46/83 (55%)
Query: 7 ALAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDR 66
++A S+DG +LA+ G D ++ I+D T++ + + G + C ++ + +G D
Sbjct: 308 SIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGEDD 367
Query: 67 SIKVWNVEDRAYINTLFGHQSEV 89
++VW++EDR + GH S V
Sbjct: 368 LVQVWSMEDRKVVAWGEGHNSWV 390
>AT4G04940.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:2511212-2517052 REVERSE
Length = 910
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 5 VLALAVSSDGR-YLASGGLDRHVHIWDTRTREHIQAF--PGHRGPVSCLTFRQGTSELFS 61
V AL+ S+DGR LASGG + IW+ ++ +Q+ H + L F L S
Sbjct: 227 VTALSFSTDGRPLLASGGSFGVISIWNL-NKKRLQSVIRDAHDSSIISLNFLANEPVLMS 285
Query: 62 GSFDRSIKVW----NVEDRAYINTLFGHQSEVLTVDCLRKER-LLATGRDRTMQLFKV 114
S D S+K+W N D + GH + L + R +L+ G+DR +LF V
Sbjct: 286 ASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNGRHILSAGQDRAFRLFSV 343
>AT1G15440.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:5306159-5309460 REVERSE
Length = 900
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 3 KQVLALAVSSDGRYLASGGLDR-HVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFS 61
+Q ++L G + +G LD + +W +T + GH PV L F T L S
Sbjct: 475 RQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLAS 534
Query: 62 GSFDRSIKVWNVEDRAYINTLFGHQSEVLTV 92
S+D ++++W+V F H +VLTV
Sbjct: 535 SSWDYTVRLWDVFASKGTVETFRHNHDVLTV 565
>AT1G15440.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:5306159-5309460 REVERSE
Length = 860
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 3 KQVLALAVSSDGRYLASGGLDR-HVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFS 61
+Q ++L G + +G LD + +W +T + GH PV L F T L S
Sbjct: 435 RQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLAS 494
Query: 62 GSFDRSIKVWNVEDRAYINTLFGHQSEVLTV 92
S+D ++++W+V F H +VLTV
Sbjct: 495 SSWDYTVRLWDVFASKGTVETFRHNHDVLTV 525
>AT1G62020.1 | Symbols: | coatomer protein complex, subunit
alpha, putative | chr1:22919814-22923728 FORWARD
Length = 1216
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 31/67 (46%)
Query: 26 VHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKVWNVEDRAYINTLFGH 85
+ +WD R I F H GPV + F SG D IKVWN ++ + TL GH
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGH 92
Query: 86 QSEVLTV 92
+ TV
Sbjct: 93 LDYIRTV 99