Jatropha Genome Database

JcCB0285631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0285631.10 - phase: 0 
         (82 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37500.1 | Symbols:  | arginine biosynthesis protein ArgJ fam...    59   7e-10

>AT2G37500.1 | Symbols:  | arginine biosynthesis protein ArgJ
          family | chr2:15739904-15742689 REVERSE
          Length = 468

 Score = 58.9 bits (141), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 2/61 (3%)

Query: 3  CCVPHYVSMKFPELSTSKIFSSFSLTKRDFKVFAVASSMDETANYIPAAPIFIPEGPWNQ 62
          C   H+VS K P     K F   S  +R+ +VFAVA++++E +  IPAAPI +P+G W Q
Sbjct: 4  CSHTHFVSFKLPHFFAPKSFVVSS--RRELRVFAVATTVEEASGNIPAAPISLPQGSWKQ 61

Query: 63 V 63
          +
Sbjct: 62 I 62