Jatropha Genome Database

JcCB0280191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0280191.10 + phase: 0 /pseudo/partial
         (160 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G65720.1 | Symbols: ATNIFS1, NIFS1, NFS1, ATNFS1 | NFS1; ATP ...   158   1e-39
AT5G65720.2 | Symbols: ATNIFS1, NIFS1, NFS1, ATNFS1 | NFS1; ATP ...   157   2e-39

>AT5G65720.1 | Symbols: ATNIFS1, NIFS1, NFS1, ATNFS1 | NFS1; ATP
           binding / cysteine desulfurase/ transaminase |
           chr5:26296349-26297710 FORWARD
          Length = 453

 Score =  158 bits (400), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/162 (56%), Positives = 109/162 (67%), Gaps = 25/162 (15%)

Query: 1   CELAKKEMEYDDKRIRALQERLLNGIKAKLDGVVVNGSVERRYAGNLNVSFAYVEGESLL 60
           CELA KEMEYD+K I+ LQERLLNG++ KLDGVVVNGS++ RY GNLN+SFAYVEGESLL
Sbjct: 304 CELAMKEMEYDEKWIKGLQERLLNGVREKLDGVVVNGSMDSRYVGNLNLSFAYVEGESLL 363

Query: 61  MGLKDVAVSSGSACTSASLEPSYVLRALG----------**GYGAYFNKV---RHWEVYH 107
           MGLK+VAVSSGSACTSASLEPSYVLRALG            G G +  K    +  E+  
Sbjct: 364 MGLKEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTKEEIDKAVELTV 423

Query: 108 RRGD**GH*AYSEAGGKVKRNEPAL*DGEGGIDIKQIQWAQH 149
           ++ +            K++   P     + GIDIK IQW+QH
Sbjct: 424 KQVE------------KLREMSPLYEMVKEGIDIKNIQWSQH 453


>AT5G65720.2 | Symbols: ATNIFS1, NIFS1, NFS1, ATNFS1 | NFS1; ATP
           binding / cysteine desulfurase/ transaminase |
           chr5:26296733-26297710 FORWARD
          Length = 325

 Score =  157 bits (397), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/162 (56%), Positives = 109/162 (67%), Gaps = 25/162 (15%)

Query: 1   CELAKKEMEYDDKRIRALQERLLNGIKAKLDGVVVNGSVERRYAGNLNVSFAYVEGESLL 60
           CELA KEMEYD+K I+ LQERLLNG++ KLDGVVVNGS++ RY GNLN+SFAYVEGESLL
Sbjct: 176 CELAMKEMEYDEKWIKGLQERLLNGVREKLDGVVVNGSMDSRYVGNLNLSFAYVEGESLL 235

Query: 61  MGLKDVAVSSGSACTSASLEPSYVLRALG----------**GYGAYFNKV---RHWEVYH 107
           MGLK+VAVSSGSACTSASLEPSYVLRALG            G G +  K    +  E+  
Sbjct: 236 MGLKEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTKEEIDKAVELTV 295

Query: 108 RRGD**GH*AYSEAGGKVKRNEPAL*DGEGGIDIKQIQWAQH 149
           ++ +            K++   P     + GIDIK IQW+QH
Sbjct: 296 KQVE------------KLREMSPLYEMVKEGIDIKNIQWSQH 325