Jatropha Genome Database

JcCB0279151.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0279151.10 - phase: 0 
         (69 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G27030.1 | Symbols:  | unknown protein | chr3:9972508-9974225...    73   4e-14
AT5G40970.1 | Symbols:  | unknown protein | chr5:16414081-164142...    64   2e-11
AT3G48660.1 | Symbols:  | unknown protein | chr3:18029659-180301...    59   6e-10
AT5G08391.1 | Symbols:  | unknown protein | chr5:2699357-2699566...    57   2e-09
AT5G14110.1 | Symbols:  | unknown protein | chr5:4553964-4554176...    57   2e-09
AT5G63500.1 | Symbols:  | unknown protein | chr5:25423460-254236...    56   5e-09
AT3G01950.1 | Symbols:  | unknown protein | chr3:324026-324238 F...    55   1e-08
AT3G27027.1 | Symbols:  | unknown protein | chr3:9971921-9972130...    51   1e-07
AT3G01940.1 | Symbols:  | unknown protein | chr3:322841-323053 R...    46   4e-06

>AT3G27030.1 | Symbols:  | unknown protein | chr3:9972508-9974225
           REVERSE
          Length = 142

 Score = 72.8 bits (177), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 43/69 (62%)

Query: 1   MADWAXXXXXXXXXXXXXXXXXXQLPGSTRHVEFGSFKTNGKAIVVHTVIFFSVFTILIL 60
           MADWA                   LPG+ R V+FG  KTNGKAI VHT+IFF+++TILIL
Sbjct: 74  MADWAPVLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVHTLIFFAIYTILIL 133

Query: 61  AVRVRIYTG 69
           A+ + IYTG
Sbjct: 134 ALNLHIYTG 142



 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 39/66 (59%)

Query: 1  MADWAXXXXXXXXXXXXXXXXXXQLPGSTRHVEFGSFKTNGKAIVVHTVIFFSVFTILIL 60
          M DW                   Q+PG  R VEFG+F+T+G +++VHT+I+F++  IL+L
Sbjct: 1  MPDWGPVFVAVTLFVLLTPGLLIQVPGRGRVVEFGTFQTSGLSVIVHTLIYFTLVCILLL 60

Query: 61 AVRVRI 66
          A+++ I
Sbjct: 61 ALQIHI 66


>AT5G40970.1 | Symbols:  | unknown protein |
          chr5:16414081-16414290 FORWARD
          Length = 69

 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 39/69 (56%)

Query: 1  MADWAXXXXXXXXXXXXXXXXXXQLPGSTRHVEFGSFKTNGKAIVVHTVIFFSVFTILIL 60
          MADWA                   LPG    ++FG  KTNGKAI VHT+IFF+ +TILIL
Sbjct: 1  MADWAPVLVGVVLFVILSPGLLFSLPGHHHTLQFGGMKTNGKAIAVHTLIFFAAYTILIL 60

Query: 61 AVRVRIYTG 69
          AV + I TG
Sbjct: 61 AVNLHITTG 69


>AT3G48660.1 | Symbols:  | unknown protein |
          chr3:18029659-18030133 FORWARD
          Length = 89

 Score = 58.9 bits (141), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 39/69 (56%)

Query: 1  MADWAXXXXXXXXXXXXXXXXXXQLPGSTRHVEFGSFKTNGKAIVVHTVIFFSVFTILIL 60
          MADW                   Q+P   R VEFG+ +T+G +I+VHT+IFF + TI  +
Sbjct: 1  MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query: 61 AVRVRIYTG 69
          A+R+ IYTG
Sbjct: 61 AIRLHIYTG 69


>AT5G08391.1 | Symbols:  | unknown protein | chr5:2699357-2699566
          FORWARD
          Length = 69

 Score = 57.0 bits (136), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 41/69 (59%)

Query: 1  MADWAXXXXXXXXXXXXXXXXXXQLPGSTRHVEFGSFKTNGKAIVVHTVIFFSVFTILIL 60
          M+DW                   QLPG  ++VEFG+F+T+  +++VH++++FS+  + +L
Sbjct: 1  MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60

Query: 61 AVRVRIYTG 69
          A+++ IY G
Sbjct: 61 ALKIHIYIG 69


>AT5G14110.1 | Symbols:  | unknown protein | chr5:4553964-4554176
          REVERSE
          Length = 70

 Score = 57.0 bits (136), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 35/44 (79%)

Query: 24 QLPGSTRHVEFGSFKTNGKAIVVHTVIFFSVFTILILAVRVRIY 67
          QLPG T+ VEFG F+T+G AIV+HT+IFF+  T+ I+A+ + IY
Sbjct: 25 QLPGKTKVVEFGGFQTSGAAIVIHTLIFFACITVSIIALHIHIY 68


>AT5G63500.1 | Symbols:  | unknown protein |
          chr5:25423460-25423669 FORWARD
          Length = 69

 Score = 55.8 bits (133), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 37/69 (53%)

Query: 1  MADWAXXXXXXXXXXXXXXXXXXQLPGSTRHVEFGSFKTNGKAIVVHTVIFFSVFTILIL 60
          MADW                   Q+P   R VEFG+ +T+G +I+VH +IFF + TI  +
Sbjct: 1  MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60

Query: 61 AVRVRIYTG 69
          A+ V IY+G
Sbjct: 61 AINVHIYSG 69


>AT3G01950.1 | Symbols:  | unknown protein | chr3:324026-324238
          FORWARD
          Length = 70

 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 37/66 (56%)

Query: 3  DWAXXXXXXXXXXXXXXXXXXQLPGSTRHVEFGSFKTNGKAIVVHTVIFFSVFTILILAV 62
          DW                   QLPG ++ VEFG F+T+G +IV+HT++FF+  TI ++A+
Sbjct: 4  DWGPVLMSVIFFIVLSPGVLFQLPGKSKAVEFGGFQTSGPSIVIHTLLFFAFITISLIAL 63

Query: 63 RVRIYT 68
           + IY 
Sbjct: 64 HIHIYA 69


>AT3G27027.1 | Symbols:  | unknown protein | chr3:9971921-9972130
          FORWARD
          Length = 69

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 35/65 (53%)

Query: 3  DWAXXXXXXXXXXXXXXXXXXQLPGSTRHVEFGSFKTNGKAIVVHTVIFFSVFTILILAV 62
          DW                   QLP  TR VEFG+  T+G AI+VH  I+F + TIL++A+
Sbjct: 4  DWGPVIVAVSLFILLSPGLLFQLPARTRVVEFGNMTTSGIAILVHAFIYFCILTILVIAI 63

Query: 63 RVRIY 67
          ++ I+
Sbjct: 64 QIHIH 68


>AT3G01940.1 | Symbols:  | unknown protein | chr3:322841-323053
          REVERSE
          Length = 70

 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 36/66 (54%)

Query: 2  ADWAXXXXXXXXXXXXXXXXXXQLPGSTRHVEFGSFKTNGKAIVVHTVIFFSVFTILILA 61
          ADW                   QLP   R +E G+  T+G +I+VH ++FF++ TIL++A
Sbjct: 4  ADWGPVAVAVVLFVVLSPGLLFQLPARRRVLECGNMTTSGISILVHAILFFAIITILVIA 63

Query: 62 VRVRIY 67
          +++ I+
Sbjct: 64 IQIHIH 69