Jatropha Genome Database

JcCB0273441.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0273441.20 - phase: 0 /pseudo
         (429 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G49820.1 | Symbols: ATMTK | ATMTK (ARABIDOPSIS THALIANA S-MET...   610   e-175

>AT1G49820.1 | Symbols: ATMTK | ATMTK (ARABIDOPSIS THALIANA
           S-METHYL-5-THIORIBOSE KINASE); S-methyl-5-thioribose
           kinase | chr1:18443005-18444907 FORWARD
          Length = 420

 Score =  610 bits (1574), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 294/435 (67%), Positives = 349/435 (80%), Gaps = 27/435 (6%)

Query: 1   MAFSEFRPLDENALVEYIKATPVLSNKIGNEF--DNLEVKEVGDGNLNFVYIVIGSAGSF 58
           M+F EF PL+E +LV+YIK+TP LS+KIG +   D+L +KEVGDGNLNFV+IV+GS+GS 
Sbjct: 1   MSFEEFTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSL 60

Query: 59  VIKQALPYIRCIGESWPMTKERAYFEGRALKEHGKLSPEHVPEVYHFDRTMSLIAMRYLE 118
           VIKQALPYIRCIGESWPMTKERAYFE   L++HG LSP+HVPEVYHFDRTM+LI MRYLE
Sbjct: 61  VIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLE 120

Query: 119 PPHIILRKGLIAGVKYPHLAEHISDYMARXXXXXXXXXXXXXEHKRVVAEFCGNVELCRL 178
           PPHIILRKGLIAG++YP LA+H+SDYMA+             EH+R V EFCGNVELCRL
Sbjct: 121 PPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRRAVTEFCGNVELCRL 180

Query: 179 TEQVVFSDPYKVSEYNRWTSPYLDQDAVAVREDNILKLEVAELKSRFCEQAQALIHGDLH 238
           TEQVVFSDPY+VS +NRWTSPYLD DA AVRED+ LKLE+AELKS FCE+AQALIHGDLH
Sbjct: 181 TEQVVFSDPYRVSTFNRWTSPYLDDDAKAVREDSALKLEIAELKSMFCERAQALIHGDLH 240

Query: 239 TGSVMVTSSSTQVIDPEFAFYGPMGFDIGAFIGNLILAYFSQDGHASPVDDRKFISESHI 298
           TGSVMVT  STQVIDPEF+FYGPMGFDIGA++GNLILA+F+QDGHA+  +DRK       
Sbjct: 241 TGSVMVTQDSTQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRK------- 293

Query: 299 LMQSYKEWILKTIEETWNLFYKKFIGLWDEHKDGPGEAYLPAIYNNPEVRQLVQENFLKG 358
               YK+WIL+TIE+TWNLF K+FI LWD++KDGPGEAYL  IYNN EV + VQEN+++ 
Sbjct: 294 ---EYKQWILRTIEQTWNLFNKRFIALWDQNKDGPGEAYLADIYNNTEVLKFVQENYMRN 350

Query: 359 LFHDTLGFGAAKMIRRIVGVAHVEDFESNXRCXQTSXMXEAGTXVCKTSS-------XRK 411
           L HD+LGFGAAKMIRRIVGVAHVEDFES     + +        +C+ S+        ++
Sbjct: 351 LLHDSLGFGAAKMIRRIVGVAHVEDFESIEEDKRRA--------ICERSALEFAKMLLKE 402

Query: 412 GGRFQSINEVVSAIR 426
             +F+SI EVVSAI+
Sbjct: 403 RRKFKSIGEVVSAIQ 417