Jatropha Genome Database
- JcCB0273441.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0273441.10 + phase: 0
(212 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G15220.1 | Symbols: | secretory protein, putative | chr2:660... 261 2e-70
AT2G15130.1 | Symbols: | plant basic secretory protein (BSP) fa... 234 2e-62
AT2G15130.2 | Symbols: | plant basic secretory protein (BSP) fa... 195 2e-50
AT2G15170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 8e-07
>AT2G15220.1 | Symbols: | secretory protein, putative |
chr2:6608689-6609366 FORWARD
Length = 225
Score = 261 bits (667), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/203 (61%), Positives = 151/203 (74%), Gaps = 2/203 (0%)
Query: 8 IQYHVIINSPRTSTGSVRYAQEIG-IELSKQTLTNATDFIWTLLQLNKETERKGVQDISL 66
+ Y V+ NS STG R+ EIG I QTL +ATDF+W L Q ++RK V I+L
Sbjct: 22 VDYSVVDNSG-DSTGGRRFRGEIGGISYGTQTLRSATDFVWRLFQQTNPSDRKSVTKITL 80
Query: 67 IIEDMEGVAYTDDNEIHFSTKYVANYSEDLKSEVIGILYHEMTHIWQWNGNGKTPGGLIE 126
+E+ +GVAY NEIHF+ Y+A S D+K E G++YHE+ H WQWNG G+ PGGLIE
Sbjct: 81 FMENGDGVAYNSANEIHFNVGYLAGVSGDVKREFTGVVYHEVVHSWQWNGAGRAPGGLIE 140
Query: 127 GIADLVRLKANYAPSHWVQPGQGERWDQGYDVTARFLDYCNDLRDGFVADLNKKMRSDYK 186
GIAD VRLKA YAPSHWV PG+G+RWDQGYDVTARFLDYCN LR+GFVA+LNKKMR+ Y
Sbjct: 141 GIADYVRLKAGYAPSHWVGPGRGDRWDQGYDVTARFLDYCNGLRNGFVAELNKKMRNGYS 200
Query: 187 VEYFVELLGKPVHQLWNEYKAKH 209
+FV+LLGK V+QLW EYKAK+
Sbjct: 201 DGFFVDLLGKDVNQLWREYKAKY 223
>AT2G15130.1 | Symbols: | plant basic secretory protein (BSP)
family protein | chr2:6565154-6565831 FORWARD
Length = 225
Score = 234 bits (598), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 107/198 (54%), Positives = 143/198 (72%), Gaps = 1/198 (0%)
Query: 13 IINSPRTSTGSVRYAQEIG-IELSKQTLTNATDFIWTLLQLNKETERKGVQDISLIIEDM 71
++++ S G R+ EIG + +Q+L +ATDF W L Q ++RK V I+L +E+
Sbjct: 26 VVDNTGDSPGGRRFRNEIGGVSYGEQSLRDATDFTWRLFQQTNPSDRKDVTKITLFMENS 85
Query: 72 EGVAYTDDNEIHFSTKYVANYSEDLKSEVIGILYHEMTHIWQWNGNGKTPGGLIEGIADL 131
G+AY+ +EIH++ + + ++ G++YHE+ H WQWNG G+ PGGLIEGIAD
Sbjct: 86 NGIAYSSQDEIHYNAGSLVDDKGYVRRGFTGVVYHEVVHSWQWNGAGRAPGGLIEGIADY 145
Query: 132 VRLKANYAPSHWVQPGQGERWDQGYDVTARFLDYCNDLRDGFVADLNKKMRSDYKVEYFV 191
VRLKA Y SHWV+PG G+RWDQGYDVTARFL+YCNDLR+GFVA+LNKKMRSDY +FV
Sbjct: 146 VRLKAGYVASHWVRPGGGDRWDQGYDVTARFLEYCNDLRNGFVAELNKKMRSDYNDGFFV 205
Query: 192 ELLGKPVHQLWNEYKAKH 209
+LLGK V+QLW EYKA +
Sbjct: 206 DLLGKDVNQLWREYKANY 223
>AT2G15130.2 | Symbols: | plant basic secretory protein (BSP)
family protein | chr2:6565397-6565831 FORWARD
Length = 144
Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 111/142 (78%)
Query: 68 IEDMEGVAYTDDNEIHFSTKYVANYSEDLKSEVIGILYHEMTHIWQWNGNGKTPGGLIEG 127
+E+ G+AY+ +EIH++ + + ++ G++YHE+ H WQWNG G+ PGGLIEG
Sbjct: 1 MENSNGIAYSSQDEIHYNAGSLVDDKGYVRRGFTGVVYHEVVHSWQWNGAGRAPGGLIEG 60
Query: 128 IADLVRLKANYAPSHWVQPGQGERWDQGYDVTARFLDYCNDLRDGFVADLNKKMRSDYKV 187
IAD VRLKA Y SHWV+PG G+RWDQGYDVTARFL+YCNDLR+GFVA+LNKKMRSDY
Sbjct: 61 IADYVRLKAGYVASHWVRPGGGDRWDQGYDVTARFLEYCNDLRNGFVAELNKKMRSDYND 120
Query: 188 EYFVELLGKPVHQLWNEYKAKH 209
+FV+LLGK V+QLW EYKA +
Sbjct: 121 GFFVDLLGKDVNQLWREYKANY 142
>AT2G15170.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: defense response; LOCATED IN: endomembrane
system; CONTAINS InterPro DOMAIN/s: Plant Basic
Secretory Protein (InterPro:IPR007541); BEST Arabidopsis
thaliana protein match is: plant basic secretory protein
(BSP) family protein (TAIR:AT2G15130.1); Has 73 Blast
hits to 73 proteins in 13 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink). |
chr2:6587660-6587968 FORWARD
Length = 102
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 13 IINSPRTSTGSVRYAQEIG-IELSKQTLTNATDFIWTLLQLNKETERKGVQDISLIIEDM 71
++++ S G ++ EIG + KQ++ +ATDF W L Q +RK + +I+L IE+
Sbjct: 26 VVDNTGDSPGGRKFRDEIGGVSYGKQSVRSATDFTWRLFQQTNPLDRKTITNITLFIENS 85
Query: 72 EGVAYTDD--NEIHF 84
VAY + EIHF
Sbjct: 86 NSVAYNTNLGKEIHF 100