Jatropha Genome Database

JcCB0272031.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0272031.10 + phase: 1 /partial/short
         (45 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G11680.1 | Symbols: CYP51G1, EMB1738, CYP51A2, CYP51 | CYP51G...    66   5e-12

>AT1G11680.1 | Symbols: CYP51G1, EMB1738, CYP51A2, CYP51 | CYP51G1
           (CYTOCHROME P450 51G1); oxygen binding / sterol
           14-demethylase | chr1:3938925-3940585 FORWARD
          Length = 488

 Score = 65.9 bits (159), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 30/43 (69%), Positives = 32/43 (74%)

Query: 1   IWSHLLRNFEMELVSPFPEIDWNAXXXXXXXXXXXRYKRRELS 43
           IWSHLLRNFE+ELVSPFPEIDWNA           RYKRR+LS
Sbjct: 446 IWSHLLRNFELELVSPFPEIDWNAMVVGVKGNVMVRYKRRQLS 488