Jatropha Genome Database
- JcCB0271581.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0271581.10 + phase: 0
(329 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 201 7e-52
AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) family p... 172 3e-43
AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 168 4e-42
AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 168 5e-42
AT2G22770.1 | Symbols: NAI1 | NAI1; DNA binding / transcription ... 161 5e-40
AT2G46510.1 | Symbols: ATAIB | ATAIB (ABA-INDUCIBLE BHLH-TYPE TR... 83 2e-16
AT4G09820.1 | Symbols: TT8 | TT8 (TRANSPARENT TESTA 8); DNA bind... 79 6e-15
AT1G12860.1 | Symbols: SCRM2, ICE2 | SCRM2 (SCREAM 2); DNA bindi... 78 6e-15
AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) family p... 77 1e-14
AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 77 1e-14
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF... 74 1e-13
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF... 74 1e-13
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF... 74 1e-13
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |... 74 2e-13
AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) family p... 73 3e-13
AT5G46760.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 73 3e-13
AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 73 3e-13
AT4G17880.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 73 3e-13
AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) family p... 71 1e-12
AT3G24140.1 | Symbols: FMA | FMA (FAMA); DNA binding / transcrip... 71 1e-12
AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 70 1e-12
AT2G16910.1 | Symbols: AMS | AMS (ABORTED MICROSPORES); DNA bind... 70 2e-12
AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | EGL3 (ENHANCER OF G... 68 8e-12
AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | EGL3 (ENHANCER OF G... 68 8e-12
AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 68 9e-12
AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 68 1e-11
AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 67 1e-11
AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) family p... 67 2e-11
AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) family p... 67 2e-11
AT5G41315.1 | Symbols: GL3, MYC6.2 | GL3 (GLABROUS 3); protein b... 66 2e-11
AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) family p... 64 9e-11
AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) family p... 64 1e-10
AT5G46830.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 63 3e-10
AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29 |... 59 5e-09
AT4G01460.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 59 6e-09
AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 58 7e-09
AT5G67110.1 | Symbols: ALC | ALC (ALCATRAZ); DNA binding / trans... 58 7e-09
AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 55 5e-08
AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | PIF3 (PHYTOCHROME INTE... 55 6e-08
AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | PIF3 (PHYTOCHROME INTE... 55 6e-08
AT4G00050.1 | Symbols: UNE10 | UNE10 (unfertilized embryo sac 10... 55 7e-08
AT5G65640.1 | Symbols: bHLH093 | bHLH093 (beta HLH protein 93); ... 55 7e-08
AT4G00120.1 | Symbols: IND1, GT140, IND, EDA33 | IND (INDEHISCEN... 55 8e-08
AT2G24260.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 55 8e-08
AT2G20180.2 | Symbols: PIL5 | PIL5 (PHYTOCHROME INTERACTING FACT... 54 1e-07
AT2G20180.1 | Symbols: PIL5, PIF1 | PIL5 (PHYTOCHROME INTERACTIN... 54 1e-07
AT3G06120.1 | Symbols: MUTE | MUTE (MUTE); DNA binding / transcr... 54 2e-07
AT4G30980.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 53 2e-07
AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 53 2e-07
AT5G58010.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 53 2e-07
AT4G36930.1 | Symbols: SPT | SPT (SPATULA); DNA binding / transc... 53 2e-07
AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 53 3e-07
AT5G53210.1 | Symbols: SPCH | SPCH (SPEECHLESS); DNA binding / t... 51 8e-07
AT4G21330.1 | Symbols: DYT1 | DYT1 (DYSFUNCTIONAL TAPETUM 1); DN... 51 8e-07
AT4G28800.1 | Symbols: | transcription factor | chr4:14221970-1... 51 9e-07
AT5G65640.2 | Symbols: bHLH093 | bHLH093 (beta HLH protein 93); ... 51 1e-06
AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 50 2e-06
AT5G56960.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 50 2e-06
AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 50 2e-06
AT4G38070.1 | Symbols: | bHLH family protein | chr4:17876535-17... 50 3e-06
AT4G14410.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 49 3e-06
AT4G14410.2 | Symbols: | basic helix-loop-helix (bHLH) family p... 49 3e-06
AT2G46970.1 | Symbols: PIL1 | PIL1 (PHYTOCHROME INTERACTING FACT... 49 5e-06
>AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:17796362-17797647 REVERSE
Length = 328
Score = 201 bits (510), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 142/196 (72%), Gaps = 2/196 (1%)
Query: 134 QGAKRINTNNGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYL 193
+G KR + S +QDHIIAERKRREKL+QRF+ALSA+VPGLKKMDKASVLGDA+K++
Sbjct: 135 KGTKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHI 194
Query: 194 KQLQERVKTLEEQTKRKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFDETLPEIEARI 253
K LQERV LEEQ K + +ES+V+VKKS+L+ G D LPEIE R
Sbjct: 195 KYLQERVGELEEQKKERRLESMVLVKKSKLIL-DDNNQSFSSSCEDGFSDLDLPEIEVRF 253
Query: 254 CDKHVLIRIHCEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSALDVTIIAQMDSEYEMS 313
D+ VLI+I CE +KG L K +AE+EKLH+ I NSSVL FG + LD+TIIA+ +S+++M+
Sbjct: 254 SDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSVLNFGPT-LDITIIAKKESDFDMT 312
Query: 314 VKDLVKNLHSAFKFFM 329
+ D+VK+L SA F+
Sbjct: 313 LMDVVKSLRSALSNFI 328
>AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:9672145-9673624 FORWARD
Length = 305
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 133/190 (70%), Gaps = 3/190 (1%)
Query: 134 QGAKRINTNNGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYL 193
+G KR + S +QDHI+AERKRREKL+QRF+ALSA++PGLKKMDKASVLGDAIK++
Sbjct: 109 RGTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHI 168
Query: 194 KQLQERVKTLEEQTKRKTMESVVIVKKSQLLFCXXXX--XXXXXXXXKGPFDETLPEIEA 251
K LQE VK EEQ K KTMESVV+VKKS L+ + LPEIE
Sbjct: 169 KYLQESVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEV 228
Query: 252 RICDKHVLIRIHCEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSALDVTIIAQMDSEYE 311
R+ K VLI+I CE +KG + K + E+EKL L+I NS+VL FG + D++IIAQ ++ ++
Sbjct: 229 RVSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNVLPFGPT-FDISIIAQKNNNFD 287
Query: 312 MSVKDLVKNL 321
M ++D+VKNL
Sbjct: 288 MKIEDVVKNL 297
>AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:9672145-9673624 FORWARD
Length = 304
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 133/190 (70%), Gaps = 4/190 (2%)
Query: 134 QGAKRINTNNGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYL 193
+G KR + S +QDHI+AERKRREKL+QRF+ALSA++PGLKKMDKASVLGDAIK++
Sbjct: 109 RGTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHI 168
Query: 194 KQLQERVKTLEEQTKRKTMESVVIVKKSQLLFCXXXX--XXXXXXXXKGPFDETLPEIEA 251
K LQE VK EEQ K KTMESVV+VKKS L+ + LPEIE
Sbjct: 169 KYLQESVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEV 228
Query: 252 RICDKHVLIRIHCEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSALDVTIIAQMDSEYE 311
R+ K VLI+I CE +KG + K + E+EKL L+I NS+VL FG + D++IIAQ ++ ++
Sbjct: 229 RVSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNVLPFGPT-FDISIIAQ-NNNFD 286
Query: 312 MSVKDLVKNL 321
M ++D+VKNL
Sbjct: 287 MKIEDVVKNL 296
>AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:9678012-9679165 FORWARD
Length = 295
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 131/195 (67%), Gaps = 5/195 (2%)
Query: 134 QGAKRINTNNGRLSQ--SQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIK 191
+G KR ++G S +++H++AERKRREKLS++FIALSA++PGLKK DK ++L DAI
Sbjct: 100 RGTKRKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAIS 159
Query: 192 YLKQLQERVKTL-EEQTKRKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFDETLPEIE 250
+KQLQE+++TL EE+ + MES+++VKKS++ F FD+ LPEIE
Sbjct: 160 RMKQLQEQLRTLKEEKEATRQMESMILVKKSKVFF-DEEPNLSCSPSVHIEFDQALPEIE 218
Query: 251 ARICDKHVLIRIHCEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSALDVTIIAQMDSEY 310
A+I +LIRI CE KG + + +E L I NS VL FG S LD+T++AQMD ++
Sbjct: 219 AKISQNDILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDITVLAQMDKDF 278
Query: 311 EMSV-KDLVKNLHSA 324
MS+ KDLV+NL A
Sbjct: 279 SMSILKDLVRNLRLA 293
>AT2G22770.1 | Symbols: NAI1 | NAI1; DNA binding / transcription
factor | chr2:9684858-9686321 FORWARD
Length = 320
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 135/207 (65%), Gaps = 16/207 (7%)
Query: 135 GAKRIN-TNNGRLSQS---QDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAI 190
G+KR + NNG + ++H++AERKRR+KL++R IALSA++PGLKK DKA+VL DAI
Sbjct: 112 GSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAI 171
Query: 191 KYLKQLQERVKTLEEQ--TKRKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGP------- 241
K+LKQLQERVK LEE+ +K +S+++VK+SQ+ P
Sbjct: 172 KHLKQLQERVKKLEEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDE 231
Query: 242 ---FDETLPEIEARICDKHVLIRIHCEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSAL 298
F +T+P IEAR+ D+ +LIR+HCE KG + K ++ +EK L ++NS L FG+S L
Sbjct: 232 VSIFKQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNSTL 291
Query: 299 DVTIIAQMDSEYEMSVKDLVKNLHSAF 325
+TI+ +MD+++ V+++VKN+ A
Sbjct: 292 VITILTKMDNKFSRPVEEVVKNIRVAL 318
>AT2G46510.1 | Symbols: ATAIB | ATAIB (ABA-INDUCIBLE BHLH-TYPE
TRANSCRIPTION FACTOR); DNA binding / transcription
factor | chr2:19091187-19092887 REVERSE
Length = 566
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Query: 143 NGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKT 202
NGR + +H+ AER+RREKL+QRF AL ++VP + KMDKAS+LGDAI Y+K+LQE+VK
Sbjct: 388 NGR-EEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKI 446
Query: 203 LEEQ 206
+E++
Sbjct: 447 MEDE 450
>AT4G09820.1 | Symbols: TT8 | TT8 (TRANSPARENT TESTA 8); DNA binding
/ transcription factor | chr4:6182067-6186261 FORWARD
Length = 518
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 24/133 (18%)
Query: 140 NTNNGRLSQSQ-DHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQE 198
NT + RL + H++AER+RREKL+++FI L ++VP + KMDK S+LGD I Y+ L++
Sbjct: 351 NTKDKRLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRK 410
Query: 199 RVKTLEEQTKRKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFDETLPEIEARICDKHV 258
RV LE + + K+ +T E+E I + V
Sbjct: 411 RVHELENTHHEQQHKRTRTCKR-----------------------KTSEEVEVSIIENDV 447
Query: 259 LIRIHCEIRKGVL 271
L+ + CE R G+L
Sbjct: 448 LLEMRCEYRDGLL 460
>AT1G12860.1 | Symbols: SCRM2, ICE2 | SCRM2 (SCREAM 2); DNA binding
/ transcription factor | chr1:4382223-4386392 FORWARD
Length = 828
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 152 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLE---EQTK 208
+++AER+RR+KL+ R L ++VP + KMD+AS+LGDAI YLK+L +R+ L E T
Sbjct: 646 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELESTP 705
Query: 209 RKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFDETLPEIEARICD-KHVLIRIHCEIR 267
+ + Q L P + P +E R+ + K V I + C R
Sbjct: 706 PSSSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQ-PRVEVRLREGKAVNIHMFCGRR 764
Query: 268 KGVLEKTIAEVEKLHLNIINSSVLTFGSSALDVTIIAQMDSEYEM 312
G+L T+ ++ L L++ + + F ALDV Q ++++
Sbjct: 765 PGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCQEDHDV 809
>AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:109595-111367 FORWARD
Length = 590
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 143 NGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKT 202
NGR +++ +H+ AER+RREKL+QRF AL ++VP + KMDKAS+LGDA+ Y+ +L ++K
Sbjct: 426 NGR-AEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKV 484
Query: 203 LEEQTKR 209
+E + +R
Sbjct: 485 MEAERER 491
>AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:109595-111367 FORWARD
Length = 590
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 143 NGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKT 202
NGR +++ +H+ AER+RREKL+QRF AL ++VP + KMDKAS+LGDA+ Y+ +L ++K
Sbjct: 426 NGR-AEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKV 484
Query: 203 LEEQTKR 209
+E + +R
Sbjct: 485 MEAERER 491
>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF
EXPRESSION 1); DNA binding / transcription activator/
transcription factor | chr3:9832953-9834790 REVERSE
Length = 494
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 152 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTKRKT 211
+++AER+RR+KL+ R L ++VP + KMD+AS+LGDAI YLK+L +R+ L + +
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 367
Query: 212 MESVVIVKKS--------QLLFCXXXXXXXXXXXXKGPFDETLPEIEARICDKHVLIRIH 263
S+ S Q L C + E+ R + V I +
Sbjct: 368 PGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLRE-GRAVNIHMF 426
Query: 264 CEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSALDV 300
C R G+L T+ ++ L L++ + + F ALDV
Sbjct: 427 CGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDV 463
>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF
EXPRESSION 1); DNA binding / transcription activator/
transcription factor | chr3:9832953-9834790 REVERSE
Length = 494
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 152 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTKRKT 211
+++AER+RR+KL+ R L ++VP + KMD+AS+LGDAI YLK+L +R+ L + +
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 367
Query: 212 MESVVIVKKS--------QLLFCXXXXXXXXXXXXKGPFDETLPEIEARICDKHVLIRIH 263
S+ S Q L C + E+ R + V I +
Sbjct: 368 PGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLRE-GRAVNIHMF 426
Query: 264 CEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSALDV 300
C R G+L T+ ++ L L++ + + F ALDV
Sbjct: 427 CGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDV 463
>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF
EXPRESSION 1); DNA binding / transcription activator/
transcription factor | chr3:9832953-9834790 REVERSE
Length = 494
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 152 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTKRKT 211
+++AER+RR+KL+ R L ++VP + KMD+AS+LGDAI YLK+L +R+ L + +
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 367
Query: 212 MESVVIVKKS--------QLLFCXXXXXXXXXXXXKGPFDETLPEIEARICDKHVLIRIH 263
S+ S Q L C + E+ R + V I +
Sbjct: 368 PGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLRE-GRAVNIHMF 426
Query: 264 CEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSALDV 300
C R G+L T+ ++ L L++ + + F ALDV
Sbjct: 427 CGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDV 463
>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
MYC2; DNA binding / transcription activator/
transcription factor | chr1:11799042-11800913 REVERSE
Length = 623
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 143 NGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKT 202
NGR + +H+ AER+RREKL+QRF AL A+VP + KMDKAS+LGDAI Y+ +L+ +V
Sbjct: 445 NGR-EEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVK 503
Query: 203 LEEQ 206
E +
Sbjct: 504 TESE 507
>AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:14644108-14647449 FORWARD
Length = 225
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 34/209 (16%)
Query: 129 MFKACQGAKRINTNNGRLSQ--SQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVL 186
M +A G+ ++ +G + S ++++ER RR+KL+QR AL ++VP + K+DKASV+
Sbjct: 30 MEEAFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVI 89
Query: 187 GDAIKYLKQLQERVKTLEEQTKRKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFD--- 243
D+I Y+++L ++ KTLE + + +ES +S LL + P D
Sbjct: 90 KDSIDYMQELIDQEKTLEAEIRE--LES-----RSTLL--------------ENPMDYST 128
Query: 244 -------ETLPEIEARICDKHVLIRIHCEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSS 296
E L + +K V++ I C ++ + + +E L+LNI+ ++ +F +S
Sbjct: 129 RVQHYPIEVLEMKVTWMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSF-TS 187
Query: 297 ALDVTIIAQMDSEYEMSVKDLVKNLHSAF 325
L T+ Q D E +V+ ++ +A+
Sbjct: 188 RLSTTLFLQADEEESSAVEAKIQMAIAAY 216
>AT5G46760.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:18974231-18976009 FORWARD
Length = 592
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 143 NGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKT 202
NGR + +H+ AER+RREKL+QRF +L A+VP + KMDKAS+LGDAI Y+ +L+ +++
Sbjct: 408 NGR-EEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQ 466
Query: 203 LEEQTK--RKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFDETLPEIEARICDKHVLI 260
E + +K ++ + + + C EI+ +I V+I
Sbjct: 467 AESDKEEIQKKLDGMS-KEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMI 525
Query: 261 RIHC 264
R+ C
Sbjct: 526 RVQC 529
>AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:9267599-9269002 FORWARD
Length = 467
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 143 NGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKT 202
NGR ++ +H+ AER+RREKL+QRF AL A+VP + KMDKAS+L DAI Y+ +Q++++
Sbjct: 313 NGR-EEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRV 371
Query: 203 LEEQ 206
E +
Sbjct: 372 YETE 375
>AT4G17880.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:9933702-9935471 REVERSE
Length = 589
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 143 NGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKT 202
NGR + +H+ AER+RREKL+QRF +L A+VP + KMDKAS+LGDAI Y+ +L+ +++
Sbjct: 409 NGR-EEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQK 467
Query: 203 LEEQTKRKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFDETLPEIEARICDKHVLIRI 262
E K + + + ++ K E E++ +I +IRI
Sbjct: 468 A-ESDKEELQKQIDVMNKEAGNAKSSVKDRKCLNQESSVLIEM--EVDVKIIGWDAMIRI 524
Query: 263 HCEIRKGVLEKTIAEVEKLHLNIINSSV 290
C R K + +++L L + ++S+
Sbjct: 525 QCSKRNHPGAKFMEALKELDLEVNHASL 552
>AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:22940231-22941332 FORWARD
Length = 307
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 100/179 (55%), Gaps = 8/179 (4%)
Query: 151 DHIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQERVKTLEEQTK 208
+HI ER RR ++++ +L A++P +++ D+AS++G AI Y+K L++ +++LE Q K
Sbjct: 128 NHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQ-K 186
Query: 209 RKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFDET-LPEIEARICDKHVLIRIHCEIR 267
R +S V ++ L + D+T +P+IEA + HV +++ CE +
Sbjct: 187 RTQQQSNSEVVENALNHLSGISSNDLWTTLE---DQTCIPKIEATVIQNHVSLKVQCEKK 243
Query: 268 KGVLEKTIAEVEKLHLNIINSSVLTFGSSALDVTIIAQMDSEYEM-SVKDLVKNLHSAF 325
+G L K I +EKL L +++ ++ T S++ + +M+ E ++ S ++ +H F
Sbjct: 244 QGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKMEDECDLESADEITAAVHRIF 302
>AT3G24140.1 | Symbols: FMA | FMA (FAMA); DNA binding /
transcription activator/ transcription factor |
chr3:8715525-8717772 REVERSE
Length = 414
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 102/205 (49%), Gaps = 27/205 (13%)
Query: 147 SQSQDHIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQERVKTLE 204
SQ HI ER RR+++++ L +++PG +++ D+AS++G AI+++++L++ ++ LE
Sbjct: 194 SQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLE 253
Query: 205 EQTKRKTMESV----------------VIVKKSQLLFCXXXXXXXXXXXXKGPFDET--- 245
Q +R+ + + ++Q L G +ET
Sbjct: 254 SQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGG--GGLREETAEN 311
Query: 246 ---LPEIEARICDKHVLIRIHCEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSALDVTI 302
L ++E ++ +I+I R G L KTIA +E LHL+I+++++ T + L +
Sbjct: 312 KSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVL-YSF 370
Query: 303 IAQMDSEYEMSVKDLVKNLHSAFKF 327
++ SE + +D+ ++ F F
Sbjct: 371 NVKITSETRFTAEDIASSIQQIFSF 395
>AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:22939661-22941332 FORWARD
Length = 358
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 100/179 (55%), Gaps = 8/179 (4%)
Query: 151 DHIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQERVKTLEEQTK 208
+HI ER RR ++++ +L A++P +++ D+AS++G AI Y+K L++ +++LE Q K
Sbjct: 179 NHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQ-K 237
Query: 209 RKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFDET-LPEIEARICDKHVLIRIHCEIR 267
R +S V ++ L + D+T +P+IEA + HV +++ CE +
Sbjct: 238 RTQQQSNSEVVENALNHLSGISSNDLWTTLE---DQTCIPKIEATVIQNHVSLKVQCEKK 294
Query: 268 KGVLEKTIAEVEKLHLNIINSSVLTFGSSALDVTIIAQMDSEYEM-SVKDLVKNLHSAF 325
+G L K I +EKL L +++ ++ T S++ + +M+ E ++ S ++ +H F
Sbjct: 295 QGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKMEDECDLESADEITAAVHRIF 353
>AT2G16910.1 | Symbols: AMS | AMS (ABORTED MICROSPORES); DNA binding
/ transcription factor | chr2:7331721-7334077 FORWARD
Length = 571
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 88/179 (49%), Gaps = 23/179 (12%)
Query: 152 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTKRK- 210
+++AER+RR+KL+ R AL ++VP + K+D+AS+LGDAI Y+K+LQ K L+++ +
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENS 374
Query: 211 -------------TMESVVIVKKSQLLFCXX------XXXXXXXXXXKGPFDETLPEIE- 250
++ V+ L C KG E P+++
Sbjct: 375 ETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKG--QEMEPQVDV 432
Query: 251 ARICDKHVLIRIHCEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSALDVTIIAQMDSE 309
A++ + +++ CE + G + + ++ L L + N++ + S +V + + D+E
Sbjct: 433 AQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVFKVEKNDNE 491
>AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | EGL3 (ENHANCER OF
GLABRA 3); DNA binding / transcription factor |
chr1:23599809-23602734 FORWARD
Length = 596
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 52/73 (71%)
Query: 148 QSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQT 207
++ +H ++E+KRREKL++RF+ L +I+P + K+DK S+L D I+YL+ LQ+RV+ LE
Sbjct: 402 ETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCR 461
Query: 208 KRKTMESVVIVKK 220
+ E+ + + K
Sbjct: 462 ESADTETRITMMK 474
>AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | EGL3 (ENHANCER OF
GLABRA 3); DNA binding / transcription factor |
chr1:23599809-23602734 FORWARD
Length = 596
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 52/73 (71%)
Query: 148 QSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQT 207
++ +H ++E+KRREKL++RF+ L +I+P + K+DK S+L D I+YL+ LQ+RV+ LE
Sbjct: 402 ETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCR 461
Query: 208 KRKTMESVVIVKK 220
+ E+ + + K
Sbjct: 462 ESADTETRITMMK 474
>AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:362230-363639 REVERSE
Length = 423
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%)
Query: 152 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTKRKT 211
H+ AE++RREKL+ RF AL AIVP + +MDKAS+L DA+ Y++ L+ ++ LE + K+
Sbjct: 250 HVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKKMK 309
Query: 212 M 212
M
Sbjct: 310 M 310
>AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:23152361-23154872 FORWARD
Length = 247
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 23/217 (10%)
Query: 114 SDMLIPQGSIMNQNYMF------KACQGAKRINTNNGRLSQ-SQDHIIAERKRREKLSQR 166
S+ P + N+++ + +A G+ ++ +G S + +I++ER RR+KL+QR
Sbjct: 10 SNYWEPSSFLQNEDFEYDSWPLEEAISGSYDSSSPDGAASSPASKNIVSERNRRQKLNQR 69
Query: 167 FIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTKRKTMESVVIVKKSQLLFC 226
AL ++VP + KMDKAS++ DAI Y++ LQ K LE + + +ES KS L F
Sbjct: 70 LFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE--LES---TPKSSLSFS 124
Query: 227 XX--------XXXXXXXXXXKGPFDETLPEIEARIC---DKHVLIRIHCEIRKGVLEKTI 275
G + +E ++ ++ +++ + C R + K
Sbjct: 125 KDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTCNKRTDTMVKLC 184
Query: 276 AEVEKLHLNIINSSVLTFGSSALDVTIIAQMDSEYEM 312
E L+L I+ S++ +F I + E E+
Sbjct: 185 EVFESLNLKILTSNLTSFSGMIFHTVFIEADEEEQEV 221
>AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:14644108-14647449 FORWARD
Length = 254
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 21/207 (10%)
Query: 129 MFKACQGAKRINTNNGRLSQ--SQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVL 186
M +A G+ ++ +G + S ++++ER RR+KL+QR AL ++VP + K+DKASV+
Sbjct: 30 MEEAFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVI 89
Query: 187 GDAIKYLKQLQERVKTLEEQTKRKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFD--- 243
D+I Y+++L ++ KTLE + + S ++ + C
Sbjct: 90 KDSIDYMQELIDQEKTLEAEIRELESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKK 149
Query: 244 ---------------ETLPEIEARICDKHVLIRIHCEIRKGVLEKTIAEVEKLHLNIINS 288
E L + +K V++ I C ++ + + +E L+LNI+ +
Sbjct: 150 FKQMDYSTRVQHYPIEVLEMKVTWMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTT 209
Query: 289 SVLTFGSSALDVTIIAQMDSEYEMSVK 315
+ +F +S L T+ Q D E +V+
Sbjct: 210 NFSSF-TSRLSTTLFLQADEEESSAVE 235
>AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:23152361-23153293 FORWARD
Length = 226
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 18/206 (8%)
Query: 102 LCSKSINNTTPPSDMLIPQGSIMNQNY-MFKACQGAKRINTNNGRLSQ-SQDHIIAERKR 159
+ + ++N PS L + ++++ + +A G+ ++ +G S + +I++ER R
Sbjct: 4 IVDQELSNYWEPSSFLQNEDFEYDRSWPLEEAISGSYDSSSPDGAASSPASKNIVSERNR 63
Query: 160 REKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTKRKTMESVVIVK 219
R+KL+QR AL ++VP + KMDKAS++ DAI Y++ LQ K LE + + +ES
Sbjct: 64 RQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE--LES---TP 118
Query: 220 KSQLLFCXX--------XXXXXXXXXXKGPFDETLPEIEARIC---DKHVLIRIHCEIRK 268
KS L F G + +E ++ ++ +++ + C R
Sbjct: 119 KSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTCNKRT 178
Query: 269 GVLEKTIAEVEKLHLNIINSSVLTFG 294
+ K E L+L I+ S++ +F
Sbjct: 179 DTMVKLCEVFESLNLKILTSNLTSFS 204
>AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:23152361-23154556 FORWARD
Length = 219
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 18/206 (8%)
Query: 102 LCSKSINNTTPPSDMLIPQGSIMNQNY-MFKACQGAKRINTNNGRLSQ-SQDHIIAERKR 159
+ + ++N PS L + ++++ + +A G+ ++ +G S + +I++ER R
Sbjct: 4 IVDQELSNYWEPSSFLQNEDFEYDRSWPLEEAISGSYDSSSPDGAASSPASKNIVSERNR 63
Query: 160 REKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTKRKTMESVVIVK 219
R+KL+QR AL ++VP + KMDKAS++ DAI Y++ LQ K LE + + +ES
Sbjct: 64 RQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE--LES---TP 118
Query: 220 KSQLLFCXX--------XXXXXXXXXXKGPFDETLPEIEARIC---DKHVLIRIHCEIRK 268
KS L F G + +E ++ ++ +++ + C R
Sbjct: 119 KSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTCNKRT 178
Query: 269 GVLEKTIAEVEKLHLNIINSSVLTFG 294
+ K E L+L I+ S++ +F
Sbjct: 179 DTMVKLCEVFESLNLKILTSNLTSFS 204
>AT5G41315.1 | Symbols: GL3, MYC6.2 | GL3 (GLABROUS 3); protein
binding / transcription factor | chr5:16529457-16532866
FORWARD
Length = 637
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Query: 148 QSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLE--- 204
++ +H + E+KRREKL++RF+ L I+P + K+DK S+L D I+YL++L+ RV+ LE
Sbjct: 438 ETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCR 497
Query: 205 EQTKRKTMESVVIVKK 220
E T +T ++ + +K
Sbjct: 498 ESTDTETRGTMTMKRK 513
>AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:14644108-14645505 FORWARD
Length = 263
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 46/60 (76%)
Query: 149 SQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTK 208
S ++++ER RR+KL+QR AL ++VP + K+DKASV+ D+I Y+++L ++ KTLE + +
Sbjct: 52 SSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIR 111
>AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:14644108-14645168 FORWARD
Length = 184
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 129 MFKACQGAKRINTNNGRLSQ--SQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVL 186
M +A G+ ++ +G + S ++++ER RR+KL+QR AL ++VP + K+DKASV+
Sbjct: 30 MEEAFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVI 89
Query: 187 GDAIKYLKQLQERVKTLEEQTK 208
D+I Y+++L ++ KTLE + +
Sbjct: 90 KDSIDYMQELIDQEKTLEAEIR 111
>AT5G46830.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:19002719-19004254 FORWARD
Length = 511
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 40/54 (74%)
Query: 151 DHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLE 204
+H+ AER RREKL+ RF AL A+VP + KMDK S+L DA+ Y+ +L+ + + +E
Sbjct: 343 NHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVE 396
>AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29 |
FRU (FER-LIKE REGULATOR OF IRON UPTAKE); DNA binding /
transcription factor | chr2:12004713-12005908 FORWARD
Length = 318
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 6/70 (8%)
Query: 135 GAKRINTNNGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLK 194
G ++ T+ R +I+ER+RR ++ + AL ++VP + KMDKAS++GDA+ Y++
Sbjct: 121 GTRKTKTDRSRT------LISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQ 174
Query: 195 QLQERVKTLE 204
+LQ + K L+
Sbjct: 175 ELQSQAKKLK 184
>AT4G01460.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:621334-622697 FORWARD
Length = 315
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 85/168 (50%), Gaps = 14/168 (8%)
Query: 147 SQSQDHIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQERVKTLE 204
+Q HI ER RR ++++ +L +++P L++ D+AS++G AI ++K+L++ +++LE
Sbjct: 112 NQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQSLE 171
Query: 205 -EQTKRKTMES--VVIVKKSQLLFCXXXXXXXXXXXXKGPFDETL-----PEIEARICDK 256
E+ K T E+ S L C + F E+EA +
Sbjct: 172 AEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFGGGDTTEVEATVIQN 231
Query: 257 HVLIRIHCEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSALDVTIIA 304
HV +++ C+ K + K I +E+L L I++ ++ SS+ D I +
Sbjct: 232 HVSLKVRCKRGKRQILKAIVSIEELKLAILHLTI----SSSFDFVIYS 275
>AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:19239694-19242373 FORWARD
Length = 371
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 90/174 (51%), Gaps = 8/174 (4%)
Query: 147 SQSQDHIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQERVKTLE 204
SQ HI ER RR +++ +L +I+P +++ D+AS++G AI ++K L++++++LE
Sbjct: 190 SQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLE 249
Query: 205 EQTKRKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFDETLP--EIEARICDKHVLIRI 262
Q + + + K Q+ +E +IEA + + HV ++I
Sbjct: 250 AQKRSQQSDD----NKEQIPEDNSLRNISSNKLRASNKEEQSSKLKIEATVIESHVNLKI 305
Query: 263 HCEIRKGVLEKTIAEVEKLHLNIINSSVLTFGSSALDVTIIAQMDSEYEMSVKD 316
C ++G L ++I +EKL +++ ++ + ++++ + +M+ E + D
Sbjct: 306 QCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMEDECNLGSAD 359
>AT5G67110.1 | Symbols: ALC | ALC (ALCATRAZ); DNA binding /
transcription factor | chr5:26785332-26786338 REVERSE
Length = 210
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 128 YMFKACQ-GAKRINTNNGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVL 186
Y F+ + GAK+ N+ R +Q H ++E+KRR K++++ AL ++P K DKAS+L
Sbjct: 74 YAFEHKRSGAKQRNSLK-RNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASML 132
Query: 187 GDAIKYLKQLQERVKTL 203
+AI+YLKQLQ +V+TL
Sbjct: 133 DEAIEYLKQLQLQVQTL 149
>AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:3341357-3342877 FORWARD
Length = 315
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 107 INNTTPPSDMLIPQGSIMNQNYM--------FKACQGAKRINTNNGRLSQSQDHIIAERK 158
I+++ P +++P NY F + + +N Q +++AER+
Sbjct: 99 IHSSYSPPPLILPASQENTNNYSPLMEESKSFISIGETNKKRSNKKLEGQPSKNLMAERR 158
Query: 159 RREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTKR---KTMESV 215
RR++L+ R L +IVP + KMD+ S+LGDAI Y+K+L +++ L+E + + S
Sbjct: 159 RRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQELGSNSHLST 218
Query: 216 VIVKKSQLLFCXXXXXXXXXXXXKGPFDETLPEIEARICDKHVLIRIHCEIRKGVLEKTI 275
+I +S + E++ R + H I I C + G++ T+
Sbjct: 219 LITNESMVRNSLKF------------------EVDQREVNTH--IDICCPTKPGLVVSTV 258
Query: 276 AEVEKLHLNIINSSVLTFGSSALDVTIIAQMDSEY----EMSVKDLVKN 320
+ +E L L I + F +L + + Y E + + L++N
Sbjct: 259 STLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVTSEATKQALIRN 307
>AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | PIF3 (PHYTOCHROME
INTERACTING FACTOR 3); DNA binding / protein binding /
transcription factor/ transcription regulator |
chr1:3077216-3079367 FORWARD
Length = 524
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 46/69 (66%)
Query: 135 GAKRINTNNGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLK 194
G R + R ++ H ++ER+RR++++++ AL ++P K+DKAS+L +AI+YLK
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 195 QLQERVKTL 203
LQ +V+ +
Sbjct: 391 SLQLQVQIM 399
>AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | PIF3 (PHYTOCHROME
INTERACTING FACTOR 3); DNA binding / protein binding /
transcription factor/ transcription regulator |
chr1:3077216-3079367 FORWARD
Length = 524
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 46/69 (66%)
Query: 135 GAKRINTNNGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLK 194
G R + R ++ H ++ER+RR++++++ AL ++P K+DKAS+L +AI+YLK
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 195 QLQERVKTL 203
LQ +V+ +
Sbjct: 391 SLQLQVQIM 399
>AT4G00050.1 | Symbols: UNE10 | UNE10 (unfertilized embryo sac 10);
DNA binding / transcription factor | chr4:17863-19848
FORWARD
Length = 399
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 152 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 203
H +ERKRR+K++QR L +VP K DKAS+L + I+YLKQLQ +V +
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269
>AT5G65640.1 | Symbols: bHLH093 | bHLH093 (beta HLH protein 93); DNA
binding / transcription factor | chr5:26237137-26238904
FORWARD
Length = 351
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 147 SQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQ 206
Q +++AER+RR++L+ R L +IVP + KMD+ S+LGDAI Y+K+L +++ L Q
Sbjct: 174 GQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKL--Q 231
Query: 207 TKRKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFDETLPEIEARICDKHVLIRIHCEI 266
+ + + + S+L P P+ E D+ + I C
Sbjct: 232 DEEQELGNSNNSHHSKLF------GDLKDLNANEPLVRNSPKFEIDRRDEDTRVDICCSP 285
Query: 267 RKGVLEKTIAEVEKLHLNIINSSVLTFGSSALDVT 301
+ G+L T+ +E L L I + F +L +
Sbjct: 286 KPGLLLSTVNTLETLGLEIEQCVISCFSDFSLQAS 320
>AT4G00120.1 | Symbols: IND1, GT140, IND, EDA33 | IND (INDEHISCENT);
DNA binding / transcription factor | chr4:42601-43197
REVERSE
Length = 198
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 140 NTNNGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQER 199
N N R+S ++A R+RRE++S++ L IVPG KMD AS+L +AI+Y K L+ +
Sbjct: 112 NRRNVRISDDPQTVVA-RRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQ 170
Query: 200 VKTLEEQTK 208
V+ L+ ++
Sbjct: 171 VRILQPHSQ 179
>AT2G24260.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:10319646-10322177 REVERSE
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 145 RLSQSQD-HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 203
R Q+ D H IAER RRE++++R AL +VP K DKAS+L + I Y+K LQ +VK L
Sbjct: 141 RRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 200
>AT2G20180.2 | Symbols: PIL5 | PIL5 (PHYTOCHROME INTERACTING FACTOR
3-LIKE 5); DNA binding / phytochrome binding /
transcription factor | chr2:8704525-8706538 REVERSE
Length = 478
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 138 RINTNNGRLSQSQD-HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQL 196
R++T + + S++ + H ++ERKRR+++++R AL ++P K DKAS+L +AI+Y+K L
Sbjct: 274 RVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSL 333
Query: 197 QERVKTL 203
Q +++ +
Sbjct: 334 QLQIQMM 340
>AT2G20180.1 | Symbols: PIL5, PIF1 | PIL5 (PHYTOCHROME INTERACTING
FACTOR 3-LIKE 5); DNA binding / phytochrome binding /
transcription factor | chr2:8704525-8706237 REVERSE
Length = 407
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 138 RINTNNGRLSQSQD-HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQL 196
R++T + + S++ + H ++ERKRR+++++R AL ++P K DKAS+L +AI+Y+K L
Sbjct: 203 RVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSL 262
Query: 197 QERVKTL 203
Q +++ +
Sbjct: 263 QLQIQMM 269
>AT3G06120.1 | Symbols: MUTE | MUTE (MUTE); DNA binding /
transcription factor | chr3:1846531-1848016 FORWARD
Length = 202
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 40/203 (19%)
Query: 151 DHIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQERVKTLEEQTK 208
HI ER RR ++++ +L ++ P +K+ D+AS++G I+++K+LQ+ V+ LE + +
Sbjct: 2 SHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKR 61
Query: 209 RKTMESVVIVKKSQLLFCXXXXXXXXXXXXKGPFDE--------TLPE-----------I 249
RKT+ Q + + PF T E +
Sbjct: 62 RKTLNRPSFPYDHQTI----EPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANV 117
Query: 250 EARICDKHVLIRIHCEIRKGVLEKTIAEVEK-----LHLNI--INSSVLTFGSSALDVTI 302
EA+I +V++R+ G L K I+ +EK LHLNI + +VL F
Sbjct: 118 EAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYF--------F 169
Query: 303 IAQMDSEYEMSVKDLVKNLHSAF 325
+ ++ E +S+++L + +F
Sbjct: 170 VVKIGLECHLSLEELTLEVQKSF 192
>AT4G30980.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:15079489-15081606 REVERSE
Length = 310
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 145 RLSQSQD-HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 203
R Q+ D H IAER RRE++++R +L +VP K DKAS+L + I Y+K LQ +VK L
Sbjct: 133 RRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 192
>AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:7507720-7508841 FORWARD
Length = 373
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 154 IAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLE 204
+A R+RRE++S++ L +VPG KMD AS+L +A YLK L+ +VK LE
Sbjct: 282 VAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALE 332
>AT5G58010.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:23483670-23484889 REVERSE
Length = 297
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 145 RLSQSQD-HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 203
R Q+ D H IAER RRE++++R +L +VP K DKAS+L + I+Y++ LQ +VK L
Sbjct: 102 RRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVL 161
>AT4G36930.1 | Symbols: SPT | SPT (SPATULA); DNA binding /
transcription factor | chr4:17414167-17415945 FORWARD
Length = 373
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 40/52 (76%)
Query: 152 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 203
H ++E++RR +++++ AL +++P K DKAS+L +AI+YLKQLQ +V+ L
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:13296655-13298139 FORWARD
Length = 428
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 144 GRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 203
GR + ER+RR L++R+ AL ++P K D+AS+L D I Y+ +L+ RV L
Sbjct: 207 GRGKRKNKPFTTERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSEL 266
Query: 204 EEQTKRK 210
+ +RK
Sbjct: 267 KYLVERK 273
>AT5G53210.1 | Symbols: SPCH | SPCH (SPEECHLESS); DNA binding /
transcription factor | chr5:21586606-21588941 REVERSE
Length = 364
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
Query: 140 NTNNGRLSQSQDHIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQ 197
N +G+ Q H+ ER RR+++++ L +++P +K+ D+AS++G ++Y+ +LQ
Sbjct: 94 NKQDGQ--QKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQ 151
Query: 198 ERVKTLEEQTKRKTMESVV 216
+ +++LE + +RKT V+
Sbjct: 152 QVLQSLEAKKQRKTYAEVL 170
>AT4G21330.1 | Symbols: DYT1 | DYT1 (DYSFUNCTIONAL TAPETUM 1); DNA
binding / transcription factor | chr4:11349922-11350694
FORWARD
Length = 207
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 155 AERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 203
AER+RREKL R +AL + VP + M KAS++ DAI Y+ +LQ VK L
Sbjct: 36 AERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNL 84
>AT4G28800.1 | Symbols: | transcription factor |
chr4:14221970-14224075 FORWARD
Length = 445
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 138 RINTNNGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQ 197
R +T+ R ++ H +AER+RREK++++ L ++P K K S L DAI+Y+K LQ
Sbjct: 246 RGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQ 305
Query: 198 ERVKTL 203
+++ +
Sbjct: 306 SQIQGM 311
>AT5G65640.2 | Symbols: bHLH093 | bHLH093 (beta HLH protein 93); DNA
binding / transcription factor | chr5:26237137-26238635
FORWARD
Length = 290
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 45/63 (71%)
Query: 147 SQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQ 206
Q +++AER+RR++L+ R L +IVP + KMD+ S+LGDAI Y+K+L +++ L+++
Sbjct: 174 GQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDE 233
Query: 207 TKR 209
+
Sbjct: 234 EQE 236
>AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:13303014-13304661 FORWARD
Length = 458
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 141 TNNGRLSQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERV 200
T GR S+ ER+RR + RF L ++P K+D+AS++G+AI Y+K+L +
Sbjct: 237 TRKGRGSRKSRTSPTERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKEL---L 293
Query: 201 KTLEE 205
+T+EE
Sbjct: 294 RTIEE 298
>AT5G56960.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:23038703-23041174 REVERSE
Length = 466
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 152 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTLEEQTK 208
H+I+ERKRREKL++ F AL +++P K DKASVL A + L LQ + L E+ +
Sbjct: 290 HMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLERNR 346
>AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:25133117-25134600 REVERSE
Length = 281
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 145 RLSQSQD-HIIAERKRREKLSQRFIALSAIVPGLKK-MDKASVLGDAIKYLKQLQERVKT 202
R Q+ D H +AER RREK+S++ AL I+PG K + KA VL + I Y++ LQ +V+
Sbjct: 156 RRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEF 215
Query: 203 L 203
L
Sbjct: 216 L 216
>AT4G38070.1 | Symbols: | bHLH family protein |
chr4:17876535-17882569 FORWARD
Length = 1513
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 38/55 (69%)
Query: 149 SQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 203
++ H AER+RR +++ +F L I+P L K DKASVLG+ ++Y +L++ V+ +
Sbjct: 1350 AKKHSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKMVQDI 1404
>AT4G14410.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:8300077-8301503 FORWARD
Length = 283
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 156 ERKRREKLSQRFIALSAIV-PG-LKKMDKASVLGDAIKYLKQLQERVKTLEEQTKRKTME 213
ER RREKL++RF+ LS+++ PG K DK ++L DAI+ L QL++ LEE T +K +E
Sbjct: 139 ERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEE-TNQKLLE 197
Query: 214 SVVIVK 219
+ +K
Sbjct: 198 EIKSLK 203
>AT4G14410.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:8300418-8301503 FORWARD
Length = 277
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 156 ERKRREKLSQRFIALSAIV-PG-LKKMDKASVLGDAIKYLKQLQERVKTLEEQTKRKTME 213
ER RREKL++RF+ LS+++ PG K DK ++L DAI+ L QL++ LEE T +K +E
Sbjct: 133 ERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEE-TNQKLLE 191
Query: 214 SVVIVK 219
+ +K
Sbjct: 192 EIKSLK 197
>AT2G46970.1 | Symbols: PIL1 | PIL1 (PHYTOCHROME INTERACTING FACTOR
3-LIKE 1); transcription factor | chr2:19295617-19297678
REVERSE
Length = 416
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 152 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQERVKTL 203
H + ERKRR++ +++ AL ++P K DKAS+L +AIKY++ LQ +V+ +
Sbjct: 234 HKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMM 285