Jatropha Genome Database

JcCB0270661.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0270661.10 + phase: 0 /partial
         (191 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G09020.1 | Symbols: ATISA3, ISA3 | ISA3 (ISOAMYLASE 3); alpha...   307   2e-84
AT2G39930.1 | Symbols: ISA1, ATISA1 | ISA1 (ISOAMYLASE 1); alpha...   162   1e-40
AT1G03310.1 | Symbols: ATISA2, ISA2, DBE1, BE2 | isoamylase, put...    80   1e-15
AT1G03310.2 | Symbols: ATISA2, ISA2, DBE1, BE2 | isoamylase, put...    80   1e-15

>AT4G09020.1 | Symbols: ATISA3, ISA3 | ISA3 (ISOAMYLASE 3);
           alpha-amylase/ isoamylase | chr4:5784099-5788839 FORWARD
          Length = 764

 Score =  307 bits (787), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 144/191 (75%), Positives = 160/191 (83%)

Query: 1   GDSAMKGTFATRVSGSADLYRVNKRKPYHSVNFIIAHDGFTLYDLVSYNFKHXXXXXXXX 60
           GDS MKG+FATRVSGS+DLY+VN+RKPYH VNF+IAHDGFTL DLVSYNFKH        
Sbjct: 501 GDSGMKGSFATRVSGSSDLYQVNQRKPYHGVNFVIAHDGFTLRDLVSYNFKHNEANGEGG 560

Query: 61  XXXXXXXYSWNCGFEGETDDPTIKALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRYGN 120
                  +SWNCGFEGET D  IK+LR+RQMKNFHLALMISQGTPMMLMGDEYGHTRYGN
Sbjct: 561 NDGCNDNHSWNCGFEGETGDAHIKSLRTRQMKNFHLALMISQGTPMMLMGDEYGHTRYGN 620

Query: 121 NNSYGHDTSINNFQWGLLDAQRSGHFRFFSEVIKFRGTHQVFRHENFLSNNDVTWHEDNW 180
           NNSYGHDTS+NNFQW  LDA++  HFRFFSEVIKFR +H V +HENFL+  ++TWHEDNW
Sbjct: 621 NNSYGHDTSLNNFQWKELDAKKQNHFRFFSEVIKFRHSHHVLKHENFLTQGEITWHEDNW 680

Query: 181 DNYESKFLAFT 191
           DN ESKFLAFT
Sbjct: 681 DNSESKFLAFT 691


>AT2G39930.1 | Symbols: ISA1, ATISA1 | ISA1 (ISOAMYLASE 1);
           alpha-amylase/ isoamylase | chr2:16666078-16672183
           FORWARD
          Length = 783

 Score =  162 bits (410), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 87/196 (44%), Positives = 115/196 (58%), Gaps = 7/196 (3%)

Query: 1   GDSAMKGTFATRVSGSADLYRVNKRKPYHSVNFIIAHDGFTLYDLVSYNFKHXXXXXXXX 60
           G     G FA  + GS +LY+   RKP+HS+NFI AHDGFTL DLV+YN K+        
Sbjct: 502 GTDGFSGAFAECLCGSPNLYQ-GGRKPWHSINFICAHDGFTLADLVTYNNKNNLANGEEN 560

Query: 61  XXXXXXXYSWNCGFEGETDDPTIKALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRYGN 120
                  YSWNCG EG+    ++K LR RQM+NF ++LM+SQG PM+ MGDEYGHT+ GN
Sbjct: 561 NDGENHNYSWNCGEEGDFASISVKRLRKRQMRNFFVSLMVSQGVPMIYMGDEYGHTKGGN 620

Query: 121 NNSYGHDTSINNFQWGLLDAQRSGHFRFFSEVIKFRGTHQVFRHENFLSNNDVTWHE--- 177
           NN+Y HD  +N F+W   +   S  FRF   +IKFR   +     +F +   + WH    
Sbjct: 621 NNTYCHDNYMNYFRWDKKEEAHSDFFRFCRILIKFRDECESLGLNDFPTAKRLQWHGLAP 680

Query: 178 --DNWDNYESKFLAFT 191
              NW    S+F+AF+
Sbjct: 681 EIPNWSE-TSRFVAFS 695


>AT1G03310.1 | Symbols: ATISA2, ISA2, DBE1, BE2 | isoamylase,
           putative / starch debranching enzyme, putative |
           chr1:813975-816623 FORWARD
          Length = 882

 Score = 79.7 bits (195), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 23/189 (12%)

Query: 9   FATRVSGSADLYRVNKRKPYHSVNFIIAHDGFTLYDLVSYNFKHXXXXXXXXXXXXXXXY 68
            ATR+ GS D++  + R P  S N+I  + G +L D+VS++                   
Sbjct: 611 LATRICGSGDVF-TDGRGPAFSFNYISRNSGLSLVDIVSFS-----------GPELASEL 658

Query: 69  SWNCGFEGETDDPTIKALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDT 128
           SWNCG EG T+   +   R +Q++NF     IS G P++ MGDE G +  G+        
Sbjct: 659 SWNCGEEGATNKSAVLQRRLKQIRNFLFIQYISLGVPVLNMGDECGISTRGSPLL----E 714

Query: 129 SINNFQWGLLDAQRSGHF-RFFSEVIKFRGTHQ-VFRHENFLSNNDVTWHEDN-----WD 181
           S   F W LL +       +F S +   R     VF+  +FL   ++ W+ ++     W+
Sbjct: 715 SRKPFDWNLLASAFGTQITQFISFMTSVRARRSDVFQRRDFLKPENIVWYANDQTTPKWE 774

Query: 182 NYESKFLAF 190
           +  SKFLA 
Sbjct: 775 DPASKFLAL 783


>AT1G03310.2 | Symbols: ATISA2, ISA2, DBE1, BE2 | isoamylase,
           putative / starch debranching enzyme, putative |
           chr1:813975-816623 FORWARD
          Length = 882

 Score = 79.7 bits (195), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 23/189 (12%)

Query: 9   FATRVSGSADLYRVNKRKPYHSVNFIIAHDGFTLYDLVSYNFKHXXXXXXXXXXXXXXXY 68
            ATR+ GS D++  + R P  S N+I  + G +L D+VS++                   
Sbjct: 611 LATRICGSGDVF-TDGRGPAFSFNYISRNSGLSLVDIVSFS-----------GPELASEL 658

Query: 69  SWNCGFEGETDDPTIKALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDT 128
           SWNCG EG T+   +   R +Q++NF     IS G P++ MGDE G +  G+        
Sbjct: 659 SWNCGEEGATNKSAVLQRRLKQIRNFLFIQYISLGVPVLNMGDECGISTRGSPLL----E 714

Query: 129 SINNFQWGLLDAQRSGHF-RFFSEVIKFRGTHQ-VFRHENFLSNNDVTWHEDN-----WD 181
           S   F W LL +       +F S +   R     VF+  +FL   ++ W+ ++     W+
Sbjct: 715 SRKPFDWNLLASAFGTQITQFISFMTSVRARRSDVFQRRDFLKPENIVWYANDQTTPKWE 774

Query: 182 NYESKFLAF 190
           +  SKFLA 
Sbjct: 775 DPASKFLAL 783