Jatropha Genome Database

JcCB0269831.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0269831.10 - phase: 0 
         (178 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G11260.1 | Symbols: HY5, TED 5 | HY5 (ELONGATED HYPOCOTYL 5);...   137   5e-33
AT3G17609.2 | Symbols: HYH | HYH (HY5-HOMOLOG); DNA binding / tr...    75   2e-14
AT3G17609.3 | Symbols: HYH | HYH (HY5-HOMOLOG); DNA binding / tr...    67   5e-12
AT3G17609.1 | Symbols: HYH | HYH (HY5-HOMOLOG); DNA binding / tr...    65   2e-11
AT3G17609.4 | Symbols: HYH | HYH (HY5-HOMOLOG); DNA binding / tr...    65   2e-11

>AT5G11260.1 | Symbols: HY5, TED 5 | HY5 (ELONGATED HYPOCOTYL 5);
           DNA binding / double-stranded DNA binding /
           transcription factor | chr5:3593583-3594800 REVERSE
          Length = 168

 Score =  137 bits (344), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 78/151 (51%), Positives = 88/151 (58%), Gaps = 1/151 (0%)

Query: 1   MQEQATXXXXXXXXXXXXXXXXXXAFQLEVKEGMESDEEIRRVPEISGEPAGTSASGRDA 60
           MQEQAT                  A  LE+KEG+ESDEEIRRVPE  GE  G   SGR++
Sbjct: 1   MQEQATSSLAASSLPSSSERSSSSAPHLEIKEGIESDEEIRRVPEFGGEAVGKETSGRES 60

Query: 61  SSVAGLDRVQAPGEGQSQRKRGRSPADKEXXXXXXXXXXXVSAQQARERKKAYLNELETR 120
            S  G +R QA   G+SQRKRGR+PA+KE           VSAQQARERKKAYL+ELE R
Sbjct: 61  GSATGQERTQATV-GESQRKRGRTPAEKENKRLKRLLRNRVSAQQARERKKAYLSELENR 119

Query: 121 VXXXXXXXXXXXXXXSTLQNENQMLRHVCHN 151
           V              STLQNENQMLRH+  N
Sbjct: 120 VKDLENKNSELEERLSTLQNENQMLRHILKN 150


>AT3G17609.2 | Symbols: HYH | HYH (HY5-HOMOLOG); DNA binding /
           transcription factor | chr3:6023971-6024585 FORWARD
          Length = 149

 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 3/119 (2%)

Query: 35  ESDEEIRRVPEI--SGEPAGTSASGRDASSVAGLDRVQAPGEGQSQRKRGRSPADKEXXX 92
           ESDEE+  VP++  +G     S+S  D  +   LD+ Q  G   ++R+RGR+P DKE   
Sbjct: 23  ESDEELLMVPDMEAAGSTCVLSSSADDGVNNPELDQTQN-GVSTAKRRRGRNPVDKEYRS 81

Query: 93  XXXXXXXXVSAQQARERKKAYLNELETRVXXXXXXXXXXXXXXSTLQNENQMLRHVCHN 151
                   VSAQQARERKK Y+++LE+R               STL NEN MLR +  N
Sbjct: 82  LKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKISTLTNENTMLRKMLIN 140


>AT3G17609.3 | Symbols: HYH | HYH (HY5-HOMOLOG); DNA binding /
           transcription factor | chr3:6024131-6024585 FORWARD
          Length = 120

 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 58/111 (52%), Gaps = 3/111 (2%)

Query: 43  VPEI--SGEPAGTSASGRDASSVAGLDRVQAPGEGQSQRKRGRSPADKEXXXXXXXXXXX 100
           VP++  +G     S+S  D  +   LD+ Q  G   ++R+RGR+P DKE           
Sbjct: 2   VPDMEAAGSTCVLSSSADDGVNNPELDQTQN-GVSTAKRRRGRNPVDKEYRSLKRLLRNR 60

Query: 101 VSAQQARERKKAYLNELETRVXXXXXXXXXXXXXXSTLQNENQMLRHVCHN 151
           VSAQQARERKK Y+++LE+R               STL NEN MLR +  N
Sbjct: 61  VSAQQARERKKVYVSDLESRANELQNNNDQLEEKISTLTNENTMLRKMLIN 111


>AT3G17609.1 | Symbols: HYH | HYH (HY5-HOMOLOG); DNA binding /
           transcription factor | chr3:6023971-6024585 FORWARD
          Length = 135

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 1/105 (0%)

Query: 47  SGEPAGTSASGRDASSVAGLDRVQAPGEGQSQRKRGRSPADKEXXXXXXXXXXXVSAQQA 106
           +G     S+S  D  +   LD+ Q  G   ++R+RGR+P DKE           VSAQQA
Sbjct: 23  AGSTCVLSSSADDGVNNPELDQTQN-GVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQA 81

Query: 107 RERKKAYLNELETRVXXXXXXXXXXXXXXSTLQNENQMLRHVCHN 151
           RERKK Y+++LE+R               STL NEN MLR +  N
Sbjct: 82  RERKKVYVSDLESRANELQNNNDQLEEKISTLTNENTMLRKMLIN 126


>AT3G17609.4 | Symbols: HYH | HYH (HY5-HOMOLOG); DNA binding /
           transcription factor | chr3:6023971-6024585 FORWARD
          Length = 134

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 1/105 (0%)

Query: 47  SGEPAGTSASGRDASSVAGLDRVQAPGEGQSQRKRGRSPADKEXXXXXXXXXXXVSAQQA 106
           +G     S+S  D  +   LD+ Q  G   ++R+RGR+P DKE           VSAQQA
Sbjct: 22  AGSTCVLSSSADDGVNNPELDQTQN-GVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQA 80

Query: 107 RERKKAYLNELETRVXXXXXXXXXXXXXXSTLQNENQMLRHVCHN 151
           RERKK Y+++LE+R               STL NEN MLR +  N
Sbjct: 81  RERKKVYVSDLESRANELQNNNDQLEEKISTLTNENTMLRKMLIN 125