Jatropha Genome Database

JcCB0268911.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0268911.10 + phase: 0 /pseudo
         (463 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G24080.2 | Symbols:  | KRR1 family protein | chr3:8695191-869...   152   4e-37
AT3G24080.1 | Symbols:  | KRR1 family protein | chr3:8695191-869...   152   4e-37

>AT3G24080.2 | Symbols:  | KRR1 family protein |
           chr3:8695191-8697107 REVERSE
          Length = 630

 Score =  152 bits (385), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 146/428 (34%), Positives = 195/428 (45%), Gaps = 29/428 (6%)

Query: 22  IEIDKEFARRYDHNKKREALQRYEELKKKGQIXXXXXXXXXXXXXXXXXXXIIKLSKKEN 81
            ++D +FA+R  HNK+RE LQRYEE  K+G                        L   E+
Sbjct: 22  FDVDNDFAKRLLHNKEREDLQRYEEKNKQGLFSESEEEPETESEPDSD------LGNPES 75

Query: 82  LRKFIENLNKVKKRDPSLYNQDSRLFXXXXXXXXXXXXXXXXXIDXXXXXXXXXXXXXXX 141
             KF++ L KVKK+DP + ++D++ +                                  
Sbjct: 76  NLKFVDLLIKVKKKDPIIKDKDAKFYEYDDESSEEDEVDKKDT-----KKKKKKKKMYLK 130

Query: 142 DVMAQQLLEEGPEFDDVESSSMKKTYNEEQDELKKAFLDAVKDAEMDTEG---DLLKVKE 198
           DV AQ LLE GPEF + +     +TY EEQ E +KA  DA K AE +  G   D L+V E
Sbjct: 131 DVQAQHLLEGGPEFVEEDEERKVRTYAEEQKETRKAVTDAWK-AEGNESGEDDDFLRVVE 189

Query: 199 KKNGNDVKADDGEFEKKLGEYFGPETELDENNKFLKDFFEKQMWVDRGSEDRRRGFXXXX 258
           K+  +DV+ D+ E  KK+ EY+G E E  EN +FLKD+  KQ+W ++  E+R  G     
Sbjct: 190 KEGDDDVEVDE-ELAKKMDEYYGDEAEATEN-QFLKDYLVKQLWKEK--EERVPGEEELK 245

Query: 259 XXXXXXXXXXXXX--XXXXXXXSYNFRYE-ENAGDRVMGHSRKVEGSVRKKENARKEQRK 315
                                   N+R+E ENAGD VMG SR VEGSVRKK+NARK QRK
Sbjct: 246 ELSEDDHEVWDQEDFEAGRPLDLLNYRHEDENAGDTVMGQSRVVEGSVRKKDNARKAQRK 305

Query: 316 SKEERMKIVEMQRKEEVKHXXXXXXXXXXXXXXXXXXAAGIRXXXXXXXXXXXXXXXXXP 375
           +K+ERMK  +  RKEE+K                    AG +                 P
Sbjct: 306 NKDERMKKEDDVRKEELKRLKNVKKKEIKEKMKKVLSVAGFKDGEECPLDAKDFDDEFDP 365

Query: 376 SEYDKLMKKAFGEEYYNADDVDPGFGSNNXXXXXXXXXXXXXXXXXXXLLGLPKGWEAVD 435
            EYDK+MK AF ++YY  +D D     ++                   LLGLPK W+   
Sbjct: 366 EEYDKMMKAAFDDKYYGEEDSDLNSDEDD-------DGEKPDFDKEDELLGLPKDWDVTK 418

Query: 436 NSDGFLAA 443
             D F AA
Sbjct: 419 GGDVFAAA 426


>AT3G24080.1 | Symbols:  | KRR1 family protein |
           chr3:8695191-8697107 REVERSE
          Length = 638

 Score =  152 bits (385), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 146/428 (34%), Positives = 195/428 (45%), Gaps = 29/428 (6%)

Query: 22  IEIDKEFARRYDHNKKREALQRYEELKKKGQIXXXXXXXXXXXXXXXXXXXIIKLSKKEN 81
            ++D +FA+R  HNK+RE LQRYEE  K+G                        L   E+
Sbjct: 22  FDVDNDFAKRLLHNKEREDLQRYEEKNKQGLFSESEEEPETESEPDSD------LGNPES 75

Query: 82  LRKFIENLNKVKKRDPSLYNQDSRLFXXXXXXXXXXXXXXXXXIDXXXXXXXXXXXXXXX 141
             KF++ L KVKK+DP + ++D++ +                                  
Sbjct: 76  NLKFVDLLIKVKKKDPIIKDKDAKFYEYDDESSEEDEVDKKDT-----KKKKKKKKMYLK 130

Query: 142 DVMAQQLLEEGPEFDDVESSSMKKTYNEEQDELKKAFLDAVKDAEMDTEG---DLLKVKE 198
           DV AQ LLE GPEF + +     +TY EEQ E +KA  DA K AE +  G   D L+V E
Sbjct: 131 DVQAQHLLEGGPEFVEEDEERKVRTYAEEQKETRKAVTDAWK-AEGNESGEDDDFLRVVE 189

Query: 199 KKNGNDVKADDGEFEKKLGEYFGPETELDENNKFLKDFFEKQMWVDRGSEDRRRGFXXXX 258
           K+  +DV+ D+ E  KK+ EY+G E E  EN +FLKD+  KQ+W ++  E+R  G     
Sbjct: 190 KEGDDDVEVDE-ELAKKMDEYYGDEAEATEN-QFLKDYLVKQLWKEK--EERVPGEEELK 245

Query: 259 XXXXXXXXXXXXX--XXXXXXXSYNFRYE-ENAGDRVMGHSRKVEGSVRKKENARKEQRK 315
                                   N+R+E ENAGD VMG SR VEGSVRKK+NARK QRK
Sbjct: 246 ELSEDDHEVWDQEDFEAGRPLDLLNYRHEDENAGDTVMGQSRVVEGSVRKKDNARKAQRK 305

Query: 316 SKEERMKIVEMQRKEEVKHXXXXXXXXXXXXXXXXXXAAGIRXXXXXXXXXXXXXXXXXP 375
           +K+ERMK  +  RKEE+K                    AG +                 P
Sbjct: 306 NKDERMKKEDDVRKEELKRLKNVKKKEIKEKMKKVLSVAGFKDGEECPLDAKDFDDEFDP 365

Query: 376 SEYDKLMKKAFGEEYYNADDVDPGFGSNNXXXXXXXXXXXXXXXXXXXLLGLPKGWEAVD 435
            EYDK+MK AF ++YY  +D D     ++                   LLGLPK W+   
Sbjct: 366 EEYDKMMKAAFDDKYYGEEDSDLNSDEDD-------DGEKPDFDKEDELLGLPKDWDVTK 418

Query: 436 NSDGFLAA 443
             D F AA
Sbjct: 419 GGDVFAAA 426