Jatropha Genome Database

JcCB0267531.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0267531.10 + phase: 2 /pseudo/partial
         (270 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G50375.1 | Symbols: CPI1 | CPI1 (CYCLOPROPYL ISOMERASE); cycl...   382   e-106

>AT5G50375.1 | Symbols: CPI1 | CPI1 (CYCLOPROPYL ISOMERASE);
           cycloeucalenol cycloisomerase | chr5:20511856-20513931
           FORWARD
          Length = 280

 Score =  382 bits (982), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 185/226 (81%), Positives = 203/226 (89%), Gaps = 5/226 (2%)

Query: 20  SGCCSSSLWLAPNPSKRWGELFFLCYTPFWLTLCLGVVVPYKLYESFTELEYLLLAMISA 79
           SG  S SLWLAPNPSKRWGELFFL YTPFWLTLCLG+VVPYKLYE+FTELEYLLLA++SA
Sbjct: 2   SGSSSPSLWLAPNPSKRWGELFFLFYTPFWLTLCLGIVVPYKLYETFTELEYLLLALVSA 61

Query: 80  VPSFLIPMIFVGKADSSLSWKDRYWVKASVFSASLWIIIFSYVGNYFWTHYFFTVLGASY 139
           VP+F+IPM+ VGKAD SL WKDRYWVKA+     LWII+FSYVGNYFWTHYFF VLGASY
Sbjct: 62  VPAFVIPMLLVGKADRSLCWKDRYWVKAN-----LWIIVFSYVGNYFWTHYFFKVLGASY 116

Query: 140 TFPSWKMNDVPHTTFLLTHVCFLFYHVTSNMTLRRLRHAIAHLPDKLRWATEAAWILALA 199
           TFPSWKMN+VPHTTF LTHVCFLFYHV SN+TLRRLRH+ A LPD L+W  EAAWILAL+
Sbjct: 117 TFPSWKMNNVPHTTFFLTHVCFLFYHVASNITLRRLRHSTADLPDSLKWCFEAAWILALS 176

Query: 200 YFIAYLETLAISNFPYYEFVDRASMYTVGSLFYAIYFIVSFPMFLR 245
           YFIAYLET+AI+NFPYYEFVDR++MY VG LFYAIYFIVSFPMF R
Sbjct: 177 YFIAYLETIAIANFPYYEFVDRSAMYRVGCLFYAIYFIVSFPMFFR 222