Jatropha Genome Database

JcCB0262451.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0262451.10 - phase: 0 /pseudo
         (90 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G14820.3 | Symbols:  | SEC14 cytosolic factor family protein ...   110   2e-25
AT1G14820.1 | Symbols:  | SEC14 cytosolic factor family protein ...    80   3e-16
AT1G14820.2 | Symbols:  | SEC14 cytosolic factor family protein ...    80   3e-16
AT1G01630.1 | Symbols:  | SEC14 cytosolic factor, putative / pho...    52   7e-08

>AT1G14820.3 | Symbols:  | SEC14 cytosolic factor family protein /
          phosphoglyceride transfer family protein |
          chr1:5105237-5106793 REVERSE
          Length = 252

 Score =  110 bits (275), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 53/79 (67%), Positives = 65/79 (82%), Gaps = 1/79 (1%)

Query: 1  MEKTQEITVTQMRKSVEKLGSATESCSDTTLMRFLIARSMDPEKAAKMFVQWQKWRSAFV 60
          ME++QE+ +TQ+RKSVEKL S+TE     TLMRFL+ARSMDP KAAKMFV WQKWR++ V
Sbjct: 1  MEESQELALTQLRKSVEKLSSSTEGYDKPTLMRFLVARSMDPVKAAKMFVDWQKWRASMV 60

Query: 61 -PNGFIPDSDVLDELQTRK 78
           P GFIP+S+V DEL+ RK
Sbjct: 61 PPTGFIPESEVQDELEFRK 79


>AT1G14820.1 | Symbols:  | SEC14 cytosolic factor family protein /
          phosphoglyceride transfer family protein |
          chr1:5105237-5106454 REVERSE
          Length = 239

 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 38/59 (64%), Positives = 46/59 (77%), Gaps = 1/59 (1%)

Query: 21 SATESCSDTTLMRFLIARSMDPEKAAKMFVQWQKWRSAFV-PNGFIPDSDVLDELQTRK 78
          S+ +     TLMRFL+ARSMDP KAAKMFV WQKWR++ V P GFIP+S+V DEL+ RK
Sbjct: 8  SSEKGYDKPTLMRFLVARSMDPVKAAKMFVDWQKWRASMVPPTGFIPESEVQDELEFRK 66


>AT1G14820.2 | Symbols:  | SEC14 cytosolic factor family protein /
          phosphoglyceride transfer family protein |
          chr1:5105237-5106454 REVERSE
          Length = 239

 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 38/59 (64%), Positives = 46/59 (77%), Gaps = 1/59 (1%)

Query: 21 SATESCSDTTLMRFLIARSMDPEKAAKMFVQWQKWRSAFV-PNGFIPDSDVLDELQTRK 78
          S+ +     TLMRFL+ARSMDP KAAKMFV WQKWR++ V P GFIP+S+V DEL+ RK
Sbjct: 8  SSEKGYDKPTLMRFLVARSMDPVKAAKMFVDWQKWRASMVPPTGFIPESEVQDELEFRK 66


>AT1G01630.1 | Symbols:  | SEC14 cytosolic factor, putative /
           phosphoglyceride transfer protein, putative |
           chr1:229206-230675 FORWARD
          Length = 255

 Score = 52.0 bits (123), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 40/70 (57%)

Query: 9   VTQMRKSVEKLGSATESCSDTTLMRFLIARSMDPEKAAKMFVQWQKWRSAFVPNGFIPDS 68
           V  MR   ++    T+   D  + RFL AR +D EKA+ MF+ +  W+ + +P G IP++
Sbjct: 31  VGIMRALCDRQDPETKEVDDLMIRRFLRARDLDIEKASTMFLNYLTWKRSMLPKGHIPEA 90

Query: 69  DVLDELQTRK 78
           ++ ++L   K
Sbjct: 91  EIANDLSHNK 100