Jatropha Genome Database

JcCB0259591.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0259591.10 - phase: 0 /partial
         (81 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G14240.4 | Symbols:  | nucleoside phosphatase family protein ...    47   2e-06
AT1G14240.2 | Symbols:  | nucleoside phosphatase family protein ...    47   2e-06
AT1G14240.1 | Symbols:  | nucleoside phosphatase family protein ...    47   2e-06
AT1G14240.3 | Symbols:  | nucleoside phosphatase family protein ...    47   2e-06
AT2G02970.1 | Symbols:  | nucleoside phosphatase family protein ...    47   3e-06

>AT1G14240.4 | Symbols:  | nucleoside phosphatase family protein /
           GDA1/CD39 family protein | chr1:4865159-4867777 FORWARD
          Length = 483

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)

Query: 27  VPKKEWGNTKVQLLANGEEMEGLEFKVKEMIMESCRLVFRKSGFAFKDDWARII 80
           +PK+ +  + ++L+A    M  LE  V+E I+E  R V R SGF F+D+WA +I
Sbjct: 138 IPKRMFRRSDIRLMATAG-MRLLEVPVQEQILEVTRRVLRSSGFMFRDEWANVI 190


>AT1G14240.2 | Symbols:  | nucleoside phosphatase family protein /
           GDA1/CD39 family protein | chr1:4865159-4867777 FORWARD
          Length = 483

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)

Query: 27  VPKKEWGNTKVQLLANGEEMEGLEFKVKEMIMESCRLVFRKSGFAFKDDWARII 80
           +PK+ +  + ++L+A    M  LE  V+E I+E  R V R SGF F+D+WA +I
Sbjct: 138 IPKRMFRRSDIRLMATAG-MRLLEVPVQEQILEVTRRVLRSSGFMFRDEWANVI 190


>AT1G14240.1 | Symbols:  | nucleoside phosphatase family protein /
           GDA1/CD39 family protein | chr1:4865159-4867777 FORWARD
          Length = 483

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)

Query: 27  VPKKEWGNTKVQLLANGEEMEGLEFKVKEMIMESCRLVFRKSGFAFKDDWARII 80
           +PK+ +  + ++L+A    M  LE  V+E I+E  R V R SGF F+D+WA +I
Sbjct: 138 IPKRMFRRSDIRLMATAG-MRLLEVPVQEQILEVTRRVLRSSGFMFRDEWANVI 190


>AT1G14240.3 | Symbols:  | nucleoside phosphatase family protein /
           GDA1/CD39 family protein | chr1:4865159-4867777 FORWARD
          Length = 479

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)

Query: 27  VPKKEWGNTKVQLLANGEEMEGLEFKVKEMIMESCRLVFRKSGFAFKDDWARII 80
           +PK+ +  + ++L+A    M  LE  V+E I+E  R V R SGF F+D+WA +I
Sbjct: 138 IPKRMFRRSDIRLMATAG-MRLLEVPVQEQILEVTRRVLRSSGFMFRDEWANVI 190


>AT2G02970.1 | Symbols:  | nucleoside phosphatase family protein /
           GDA1/CD39 family protein | chr2:865395-868007 REVERSE
          Length = 555

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 27  VPKKEWGNTKVQLLANGEEMEGLEFKVKEMIMESCRLVFRKSGFAFKDDWARIIE 81
           VPK  W  T+V+L+A    M  LE  V+E I+   R V + SGF F+D+WA +I 
Sbjct: 155 VPKGMWIETEVRLMATAG-MRLLELPVQEKILGVARRVLKSSGFLFRDEWASVIS 208