Jatropha Genome Database

JcCB0245051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0245051.10 - phase: 0 /partial
         (73 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G23190.1 | Symbols:  | phosphoglucomutase, cytoplasmic, putat...   130   2e-31
AT1G70730.1 | Symbols:  | phosphoglucomutase, cytoplasmic, putat...   126   3e-30
AT1G70730.3 | Symbols:  | phosphoglucomutase, cytoplasmic, putat...   125   4e-30
AT1G70730.2 | Symbols:  | phosphoglucomutase, cytoplasmic, putat...   122   5e-29
AT5G51820.1 | Symbols: PGM, ATPGMP, PGM1, STF1 | PGM (PHOSPHOGLU...    88   1e-18

>AT1G23190.1 | Symbols:  | phosphoglucomutase, cytoplasmic,
          putative / glucose phosphomutase, putative |
          chr1:8219946-8224186 FORWARD
          Length = 583

 Score =  130 bits (326), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 62/72 (86%), Positives = 67/72 (93%)

Query: 2  VVFKVSRVETTPFDGQKPGTSGLRKKVKVFVQPNYLHNFVQATFNALTAEKVRGATLVVS 61
          +VFKVS V T+P DGQKPGTSGLRKKVKVF QPNYL NFVQATFNALTAEKV+GATLVVS
Sbjct: 1  MVFKVSTVSTSPIDGQKPGTSGLRKKVKVFKQPNYLENFVQATFNALTAEKVKGATLVVS 60

Query: 62 GDGRYFSKDAIQ 73
          GDGRY+SKDA+Q
Sbjct: 61 GDGRYYSKDAVQ 72


>AT1G70730.1 | Symbols:  | phosphoglucomutase, cytoplasmic,
          putative / glucose phosphomutase, putative |
          chr1:26669020-26672726 REVERSE
          Length = 585

 Score =  126 bits (316), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 61/73 (83%), Positives = 65/73 (89%)

Query: 1  MVVFKVSRVETTPFDGQKPGTSGLRKKVKVFVQPNYLHNFVQATFNALTAEKVRGATLVV 60
          MV FKVS V T+P DGQKPGTSGLRKKVKVF QPNYL NFVQATFNALT EKV+GATLVV
Sbjct: 1  MVSFKVSLVSTSPIDGQKPGTSGLRKKVKVFKQPNYLENFVQATFNALTTEKVKGATLVV 60

Query: 61 SGDGRYFSKDAIQ 73
          SGDGRY+S+ AIQ
Sbjct: 61 SGDGRYYSEQAIQ 73


>AT1G70730.3 | Symbols:  | phosphoglucomutase, cytoplasmic, putative
           / glucose phosphomutase, putative |
           chr1:26669020-26673166 REVERSE
          Length = 662

 Score =  125 bits (315), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 61/73 (83%), Positives = 65/73 (89%)

Query: 1   MVVFKVSRVETTPFDGQKPGTSGLRKKVKVFVQPNYLHNFVQATFNALTAEKVRGATLVV 60
           MV FKVS V T+P DGQKPGTSGLRKKVKVF QPNYL NFVQATFNALT EKV+GATLVV
Sbjct: 78  MVSFKVSLVSTSPIDGQKPGTSGLRKKVKVFKQPNYLENFVQATFNALTTEKVKGATLVV 137

Query: 61  SGDGRYFSKDAIQ 73
           SGDGRY+S+ AIQ
Sbjct: 138 SGDGRYYSEQAIQ 150


>AT1G70730.2 | Symbols:  | phosphoglucomutase, cytoplasmic,
          putative / glucose phosphomutase, putative |
          chr1:26669020-26673166 REVERSE
          Length = 605

 Score =  122 bits (305), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 58/73 (79%), Positives = 64/73 (87%)

Query: 1  MVVFKVSRVETTPFDGQKPGTSGLRKKVKVFVQPNYLHNFVQATFNALTAEKVRGATLVV 60
          + +F VS V T+P DGQKPGTSGLRKKVKVF QPNYL NFVQATFNALT EKV+GATLVV
Sbjct: 21 LFIFGVSLVSTSPIDGQKPGTSGLRKKVKVFKQPNYLENFVQATFNALTTEKVKGATLVV 80

Query: 61 SGDGRYFSKDAIQ 73
          SGDGRY+S+ AIQ
Sbjct: 81 SGDGRYYSEQAIQ 93


>AT5G51820.1 | Symbols: PGM, ATPGMP, PGM1, STF1 | PGM
           (PHOSPHOGLUCOMUTASE); phosphoglucomutase |
           chr5:21063531-21067933 REVERSE
          Length = 623

 Score = 87.8 bits (216), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/69 (57%), Positives = 53/69 (76%)

Query: 5   KVSRVETTPFDGQKPGTSGLRKKVKVFVQPNYLHNFVQATFNALTAEKVRGATLVVSGDG 64
           ++  + T P +GQK GTSGLRKKVKVF++ NYL N++QA FN+L  E  + ATLV+ GDG
Sbjct: 68  EIKSLPTKPIEGQKTGTSGLRKKVKVFMEDNYLANWIQALFNSLPLEDYKNATLVLGGDG 127

Query: 65  RYFSKDAIQ 73
           RYF+K+A Q
Sbjct: 128 RYFNKEASQ 136