Jatropha Genome Database

JcCB0244361.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0244361.30 + phase: 2 /pseudo/partial
         (103 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G59530.2 | Symbols:  | strictosidine synthase family protein ...   172   4e-44
AT3G59530.1 | Symbols:  | strictosidine synthase family protein ...   172   4e-44
AT3G57030.1 | Symbols:  | strictosidine synthase family protein ...   112   6e-26
AT5G22020.1 | Symbols:  | strictosidine synthase family protein ...   110   2e-25
AT1G08470.1 | Symbols:  | strictosidine synthase family protein ...   102   6e-23
AT3G57020.1 | Symbols:  | strictosidine synthase family protein ...    83   3e-17
AT2G41290.1 | Symbols:  | strictosidine synthase family protein ...    83   3e-17
AT3G57010.1 | Symbols:  | strictosidine synthase family protein ...    82   8e-17
AT2G41300.1 | Symbols:  | strictosidine synthase | chr2:17214312...    80   4e-16
AT3G57020.2 | Symbols:  | strictosidine synthase family protein ...    77   2e-15
AT1G74020.1 | Symbols: SS2 | SS2 (STRICTOSIDINE SYNTHASE 2); str...    70   3e-13
AT1G74000.1 | Symbols: SS3 | SS3 (STRICTOSIDINE SYNTHASE 3); str...    69   8e-13
AT1G74010.1 | Symbols:  | strictosidine synthase family protein ...    67   2e-12

>AT3G59530.2 | Symbols:  | strictosidine synthase family protein |
           chr3:21993710-21995164 FORWARD
          Length = 403

 Score =  172 bits (436), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 78/94 (82%), Positives = 87/94 (92%)

Query: 1   SEKLCSRGVDSTTSKQWKYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPL 60
           SE+ C RGVDSTT+KQWK+E++CGRPLGLRF K+TGNLYIADAYYGL+VVGPEGG+A PL
Sbjct: 127 SEEACVRGVDSTTNKQWKHEKLCGRPLGLRFHKETGNLYIADAYYGLLVVGPEGGIATPL 186

Query: 61  ATHAGGKPILFANDLDLHENGSIFFTDTSKRYDR 94
           ATH  GKPILFANDLD+H NGSIFFTDTSKRYDR
Sbjct: 187 ATHVEGKPILFANDLDIHRNGSIFFTDTSKRYDR 220


>AT3G59530.1 | Symbols:  | strictosidine synthase family protein |
           chr3:21993710-21995164 FORWARD
          Length = 403

 Score =  172 bits (436), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 78/94 (82%), Positives = 87/94 (92%)

Query: 1   SEKLCSRGVDSTTSKQWKYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPL 60
           SE+ C RGVDSTT+KQWK+E++CGRPLGLRF K+TGNLYIADAYYGL+VVGPEGG+A PL
Sbjct: 127 SEEACVRGVDSTTNKQWKHEKLCGRPLGLRFHKETGNLYIADAYYGLLVVGPEGGIATPL 186

Query: 61  ATHAGGKPILFANDLDLHENGSIFFTDTSKRYDR 94
           ATH  GKPILFANDLD+H NGSIFFTDTSKRYDR
Sbjct: 187 ATHVEGKPILFANDLDIHRNGSIFFTDTSKRYDR 220


>AT3G57030.1 | Symbols:  | strictosidine synthase family protein |
           chr3:21101653-21103204 REVERSE
          Length = 374

 Score =  112 bits (279), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 1/78 (1%)

Query: 18  KYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDL 77
           + E VCGRPLGLRFDKKTG+LYIADAY+GL+VVGP GGLA PL T A G+P  F NDLD+
Sbjct: 108 ELEHVCGRPLGLRFDKKTGDLYIADAYFGLLVVGPAGGLAKPLVTEAEGQPFRFTNDLDI 167

Query: 78  HENGS-IFFTDTSKRYDR 94
            E    I+FTDTS R+ R
Sbjct: 168 DEQEDVIYFTDTSARFQR 185


>AT5G22020.1 | Symbols:  | strictosidine synthase family protein |
           chr5:7287878-7289357 REVERSE
          Length = 395

 Score =  110 bits (274), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 49/75 (65%), Positives = 61/75 (81%)

Query: 20  ERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDLHE 79
           E +CGRPLGLRFDK+TG+LYIADAY GL+ VGPEGGLA PL T A G P+ F NDLD+ +
Sbjct: 132 EHICGRPLGLRFDKRTGDLYIADAYMGLLKVGPEGGLATPLVTEAEGVPLGFTNDLDIAD 191

Query: 80  NGSIFFTDTSKRYDR 94
           +G+++FTD+S  Y R
Sbjct: 192 DGTVYFTDSSISYQR 206


>AT1G08470.1 | Symbols:  | strictosidine synthase family protein |
           chr1:2682262-2683977 REVERSE
          Length = 390

 Score =  102 bits (253), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 58/77 (75%)

Query: 18  KYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDL 77
           K E +CGRPLGLRFDKK G+LYIADAY G+M VGPEGGLA  +   A G P+ F NDLD+
Sbjct: 124 KDEDICGRPLGLRFDKKNGDLYIADAYLGIMKVGPEGGLATSVTNEADGVPLRFTNDLDI 183

Query: 78  HENGSIFFTDTSKRYDR 94
            + G+++FTD+S  + R
Sbjct: 184 DDEGNVYFTDSSSFFQR 200


>AT3G57020.1 | Symbols:  | strictosidine synthase family protein |
           chr3:21098515-21100303 REVERSE
          Length = 370

 Score = 83.2 bits (204), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 1/71 (1%)

Query: 23  CGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDLHENGS 82
           CGRPLGL F+KKTG+LYI D Y GLM VGPEGGLA  +   A G+ ++FAN  D+ E   
Sbjct: 107 CGRPLGLTFEKKTGDLYICDGYLGLMKVGPEGGLAELIVDEAEGRKVMFANQGDIDEEED 166

Query: 83  IF-FTDTSKRY 92
           +F F D+S +Y
Sbjct: 167 VFYFNDSSDKY 177


>AT2G41290.1 | Symbols:  | strictosidine synthase family protein |
           chr2:17210599-17212904 REVERSE
          Length = 376

 Score = 82.8 bits (203), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 1/78 (1%)

Query: 18  KYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDL 77
           + E VCGRPLGL FDK TG+LYIADAY GL+ VGP GG+A  +      + + F N LD+
Sbjct: 104 RTEHVCGRPLGLAFDKSTGDLYIADAYMGLLKVGPTGGVATQVLPRELNEALRFTNSLDI 163

Query: 78  H-ENGSIFFTDTSKRYDR 94
           +   G ++FTD+S  Y R
Sbjct: 164 NPRTGVVYFTDSSSVYQR 181


>AT3G57010.1 | Symbols:  | strictosidine synthase family protein |
           chr3:21095854-21097316 REVERSE
          Length = 376

 Score = 81.6 bits (200), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 39/71 (54%), Positives = 50/71 (70%), Gaps = 1/71 (1%)

Query: 23  CGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDLHENGS 82
           CGRPLGL F++KTG+LYI D Y+G+M VGPEGGLA  +   A G+ ++FAN  D+ E   
Sbjct: 108 CGRPLGLSFERKTGDLYICDGYFGVMKVGPEGGLAELVVDEAEGRKVMFANQGDIDEEED 167

Query: 83  IF-FTDTSKRY 92
           IF F D+S  Y
Sbjct: 168 IFYFNDSSDTY 178


>AT2G41300.1 | Symbols:  | strictosidine synthase |
           chr2:17214312-17216292 REVERSE
          Length = 394

 Score = 79.7 bits (195), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 1/76 (1%)

Query: 18  KYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDL 77
           K E  CGRPLGL F+KK+G+LY  D Y G+M VGP+GGLA  +     G+ ++FAN +D+
Sbjct: 127 KVEPACGRPLGLSFEKKSGDLYFCDGYLGVMKVGPKGGLAEKVVDEVEGQKVMFANQMDI 186

Query: 78  -HENGSIFFTDTSKRY 92
             E  +I+F D+S  Y
Sbjct: 187 DEEEDAIYFNDSSDTY 202


>AT3G57020.2 | Symbols:  | strictosidine synthase family protein |
           chr3:21098515-21100303 REVERSE
          Length = 356

 Score = 77.0 bits (188), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 1/69 (1%)

Query: 25  RPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDLHENGSIF 84
           RPLGL F+KKTG+LYI D Y GLM VGPEGGLA  +   A G+ ++FAN  D+ E   +F
Sbjct: 95  RPLGLTFEKKTGDLYICDGYLGLMKVGPEGGLAELIVDEAEGRKVMFANQGDIDEEEDVF 154

Query: 85  -FTDTSKRY 92
            F D+S +Y
Sbjct: 155 YFNDSSDKY 163


>AT1G74020.1 | Symbols: SS2 | SS2 (STRICTOSIDINE SYNTHASE 2);
           strictosidine synthase | chr1:27835289-27837277 REVERSE
          Length = 335

 Score = 70.1 bits (170), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 1/74 (1%)

Query: 23  CGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDLH-ENG 81
           CGRP G+ F++KTG+LY+ADA  GL V+ P GGLA  +     GKP  F + LD+    G
Sbjct: 96  CGRPAGIAFNEKTGDLYVADAPLGLHVISPAGGLATKITDSVDGKPFKFLDGLDVDPTTG 155

Query: 82  SIFFTDTSKRYDRV 95
            ++FT  S R+  +
Sbjct: 156 VVYFTSFSSRFSPI 169


>AT1G74000.1 | Symbols: SS3 | SS3 (STRICTOSIDINE SYNTHASE 3);
           strictosidine synthase | chr1:27829266-27831401 REVERSE
          Length = 329

 Score = 68.6 bits (166), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 1/71 (1%)

Query: 23  CGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDLH-ENG 81
           CGRP G+ F+ KTG+LY+ADA  GL V+   GGLA  +A   GGKP LF + LD+    G
Sbjct: 98  CGRPAGIAFNTKTGDLYVADAALGLHVIPRRGGLAKKIADSVGGKPFLFLDGLDVDPTTG 157

Query: 82  SIFFTDTSKRY 92
            ++FT  S  +
Sbjct: 158 VVYFTSFSSTF 168


>AT1G74010.1 | Symbols:  | strictosidine synthase family protein |
           chr1:27832432-27834017 REVERSE
          Length = 325

 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)

Query: 23  CGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDLH-ENG 81
           CGRP G+  + KTG+LY+ADA  GL V+ P GGLA  LA    GKP  F + LD+    G
Sbjct: 94  CGRPAGIALNSKTGDLYVADAPLGLHVISPAGGLATKLADSVDGKPFKFLDGLDVDPTTG 153

Query: 82  SIFFTDTSKRY 92
            ++FT  S ++
Sbjct: 154 VVYFTSFSSKF 164