Jatropha Genome Database
- JcCB0244361.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0244361.10 + phase: 0 /partial
(124 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G59530.2 | Symbols: | strictosidine synthase family protein ... 156 4e-39
AT3G59530.1 | Symbols: | strictosidine synthase family protein ... 156 4e-39
AT5G22020.1 | Symbols: | strictosidine synthase family protein ... 71 2e-13
AT1G08470.1 | Symbols: | strictosidine synthase family protein ... 69 5e-13
AT3G57030.1 | Symbols: | strictosidine synthase family protein ... 56 4e-09
AT3G57010.1 | Symbols: | strictosidine synthase family protein ... 56 5e-09
AT2G41290.1 | Symbols: | strictosidine synthase family protein ... 55 8e-09
AT3G57020.2 | Symbols: | strictosidine synthase family protein ... 55 1e-08
AT3G57020.1 | Symbols: | strictosidine synthase family protein ... 55 1e-08
>AT3G59530.2 | Symbols: | strictosidine synthase family protein |
chr3:21993710-21995164 FORWARD
Length = 403
Score = 156 bits (394), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
Query: 1 MEKKTFFLHRDGIFLQNPXXXXXXXXXXXXXMDPFKMGPLGRHDFRPVKHEVAPYKKVMG 60
MEKK + + +P +DPF M P+G +F+PVKHEVAPYK+VMG
Sbjct: 1 MEKKGQHGTYESMMTHHPILCIIALSVLFIAIDPFHMSPIGGREFKPVKHEVAPYKEVMG 60
Query: 61 SWPRDEKGRLGN-GKLEFVNEVFGPESLEFDAIGNGPYTGLADGRVVRWMGEDVGWETFA 119
SWPRD RLGN GKLEFV++VFGPESLEFD++G GPYTGLADGRVVRWMGE +GWETF+
Sbjct: 61 SWPRDNLSRLGNHGKLEFVDQVFGPESLEFDSLGRGPYTGLADGRVVRWMGEAIGWETFS 120
Query: 120 VVTT 123
VVT+
Sbjct: 121 VVTS 124
>AT3G59530.1 | Symbols: | strictosidine synthase family protein |
chr3:21993710-21995164 FORWARD
Length = 403
Score = 156 bits (394), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
Query: 1 MEKKTFFLHRDGIFLQNPXXXXXXXXXXXXXMDPFKMGPLGRHDFRPVKHEVAPYKKVMG 60
MEKK + + +P +DPF M P+G +F+PVKHEVAPYK+VMG
Sbjct: 1 MEKKGQHGTYESMMTHHPILCIIALSVLFIAIDPFHMSPIGGREFKPVKHEVAPYKEVMG 60
Query: 61 SWPRDEKGRLGN-GKLEFVNEVFGPESLEFDAIGNGPYTGLADGRVVRWMGEDVGWETFA 119
SWPRD RLGN GKLEFV++VFGPESLEFD++G GPYTGLADGRVVRWMGE +GWETF+
Sbjct: 61 SWPRDNLSRLGNHGKLEFVDQVFGPESLEFDSLGRGPYTGLADGRVVRWMGEAIGWETFS 120
Query: 120 VVTT 123
VVT+
Sbjct: 121 VVTS 124
>AT5G22020.1 | Symbols: | strictosidine synthase family protein |
chr5:7287878-7289357 REVERSE
Length = 395
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 32 MDPFKMGPLGRHDF-RPVKHEVAPYKKVMGSWPRDEKGRLGNGKLEFVNEVFGPESLEFD 90
+DPF + DF V HEV + W RD + L K+ F N++ GPES+ FD
Sbjct: 25 IDPFHHCAIS--DFPNFVSHEVISPRPDEVPWERDSQNSLQKSKILFFNQIQGPESVAFD 82
Query: 91 AIGNGPYTGLADGRVVRWMGEDVGWETFAVVTTN 124
++G GPYTG+ADGRV+ W GE W FA ++N
Sbjct: 83 SLGRGPYTGVADGRVLFWDGEK--WIDFAYTSSN 114
>AT1G08470.1 | Symbols: | strictosidine synthase family protein |
chr1:2682262-2683977 REVERSE
Length = 390
Score = 69.3 bits (168), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 32 MDPFKMGPLGRH-DFRPVKHEVAPYKKVMGSWP--RDEKGRLGNGKLEFVNEVFGPESLE 88
+DPF + + DF+ K ++ P + S P RD + L N ++ F+NEV GPES+
Sbjct: 19 IDPFSHSSISKFPDFKTYKIDMPP----LSSLPKERDRQNLLQNSEIRFLNEVQGPESIA 74
Query: 89 FDAIGNGPYTGLADGRVVRWMGEDVGWETFAVVTTN 124
FD G GPYTG+ADGR++ W G W FA + N
Sbjct: 75 FDPQGRGPYTGVADGRILFWNG--TRWTDFAYTSNN 108
>AT3G57030.1 | Symbols: | strictosidine synthase family protein |
chr3:21101653-21103204 REVERSE
Length = 374
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 83 GPESLEFDAIGNGPYTGLADGRVVRWMGEDVGWETFAVVTTN 124
GPES+ FD G GPY G++DGR+++W GE +GW FA ++N
Sbjct: 56 GPESIAFDPAGEGPYVGVSDGRILKWRGEPLGWSDFAHTSSN 97
>AT3G57010.1 | Symbols: | strictosidine synthase family protein |
chr3:21095854-21097316 REVERSE
Length = 376
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 31/42 (73%)
Query: 81 VFGPESLEFDAIGNGPYTGLADGRVVRWMGEDVGWETFAVVT 122
V GPESLEFD G GPY G+ DGR+++W GE++GW FA +
Sbjct: 52 VDGPESLEFDPQGEGPYVGVTDGRILKWRGEELGWVDFAYTS 93
>AT2G41290.1 | Symbols: | strictosidine synthase family protein |
chr2:17210599-17212904 REVERSE
Length = 376
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 81 VFGPESLEFDAIGNGPYTGLADGRVVRWMGEDVGWETFAVVTT 123
GPES FD G+GPYTGL+DGR+V+W+ + W FAV T+
Sbjct: 49 ALGPESFVFDFFGDGPYTGLSDGRIVKWLANESRWIDFAVTTS 91
>AT3G57020.2 | Symbols: | strictosidine synthase family protein |
chr3:21098515-21100303 REVERSE
Length = 356
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 81 VFGPESLEFDAIGNGPYTGLADGRVVRWMGEDVGWETFAVVT 122
V GPES+EFD G GPY + DGR+++W G+D+GW FA +
Sbjct: 51 VAGPESIEFDPKGEGPYAAVVDGRILKWRGDDLGWVDFAYTS 92
>AT3G57020.1 | Symbols: | strictosidine synthase family protein |
chr3:21098515-21100303 REVERSE
Length = 370
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 81 VFGPESLEFDAIGNGPYTGLADGRVVRWMGEDVGWETFAVVT 122
V GPES+EFD G GPY + DGR+++W G+D+GW FA +
Sbjct: 51 VAGPESIEFDPKGEGPYAAVVDGRILKWRGDDLGWVDFAYTS 92