Jatropha Genome Database
- JcCB0242111.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0242111.10 - phase: 2 /partial
(228 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF... 284 3e-77
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF... 284 3e-77
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF... 284 3e-77
AT1G12860.1 | Symbols: SCRM2, ICE2 | SCRM2 (SCREAM 2); DNA bindi... 274 3e-74
AT5G65640.1 | Symbols: bHLH093 | bHLH093 (beta HLH protein 93); ... 119 2e-27
AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 107 8e-24
AT2G16910.1 | Symbols: AMS | AMS (ABORTED MICROSPORES); DNA bind... 106 1e-23
AT5G65640.2 | Symbols: bHLH093 | bHLH093 (beta HLH protein 93); ... 85 4e-17
AT2G46510.1 | Symbols: ATAIB | ATAIB (ABA-INDUCIBLE BHLH-TYPE TR... 75 2e-14
AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) family p... 70 1e-12
AT5G46760.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 70 1e-12
AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) family p... 70 1e-12
AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 70 1e-12
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |... 70 1e-12
AT4G17880.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 70 1e-12
AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) family p... 69 2e-12
AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) family p... 69 3e-12
AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 69 3e-12
AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 68 4e-12
AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 66 1e-11
AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) family p... 66 1e-11
AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) family p... 66 1e-11
AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29 |... 66 2e-11
AT4G09820.1 | Symbols: TT8 | TT8 (TRANSPARENT TESTA 8); DNA bind... 66 2e-11
AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | EGL3 (ENHANCER OF G... 64 6e-11
AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | EGL3 (ENHANCER OF G... 64 6e-11
AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 64 6e-11
AT1G10610.1 | Symbols: | DNA binding / transcription factor | c... 62 4e-10
AT5G41315.1 | Symbols: GL3, MYC6.2 | GL3 (GLABROUS 3); protein b... 60 1e-09
AT5G46830.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 60 1e-09
AT4G21330.1 | Symbols: DYT1 | DYT1 (DYSFUNCTIONAL TAPETUM 1); DN... 59 3e-09
AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 57 7e-09
AT2G22770.1 | Symbols: NAI1 | NAI1; DNA binding / transcription ... 57 7e-09
AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 57 9e-09
AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) family p... 54 9e-08
AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 54 9e-08
AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 53 2e-07
AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) family p... 52 3e-07
AT4G28815.1 | Symbols: | transcription regulator | chr4:1422871... 52 3e-07
AT1G06170.2 | Symbols: | basic helix-loop-helix (bHLH) family p... 52 3e-07
AT1G06170.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 52 3e-07
AT4G28800.1 | Symbols: | transcription factor | chr4:14221970-1... 52 4e-07
AT4G00050.1 | Symbols: UNE10 | UNE10 (unfertilized embryo sac 10... 52 4e-07
AT4G36930.1 | Symbols: SPT | SPT (SPATULA); DNA binding / transc... 51 7e-07
AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 51 7e-07
AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | PIF3 (PHYTOCHROME INTE... 50 9e-07
AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | PIF3 (PHYTOCHROME INTE... 50 9e-07
AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 50 1e-06
AT5G67110.1 | Symbols: ALC | ALC (ALCATRAZ); DNA binding / trans... 50 1e-06
AT4G38070.1 | Symbols: | bHLH family protein | chr4:17876535-17... 50 1e-06
AT2G20180.2 | Symbols: PIL5 | PIL5 (PHYTOCHROME INTERACTING FACT... 50 1e-06
AT2G20180.1 | Symbols: PIL5, PIF1 | PIL5 (PHYTOCHROME INTERACTIN... 50 2e-06
AT2G40200.1 | Symbols: | basic helix-loop-helix (bHLH) family p... 47 7e-06
AT3G24140.1 | Symbols: FMA | FMA (FAMA); DNA binding / transcrip... 47 9e-06
>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF
EXPRESSION 1); DNA binding / transcription activator/
transcription factor | chr3:9832953-9834790 REVERSE
Length = 494
Score = 284 bits (727), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 135/191 (70%), Positives = 154/191 (80%)
Query: 38 LPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNEL 97
+PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAI+YLKELLQRINDLHNEL
Sbjct: 304 MPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNEL 363
Query: 98 EXXXXXXXXXXXXXFHPLTPTPSALPSRIKDKLCPTSLPSPNGQPXXXXXXXXXXXXXNI 157
E FHPLTPTP L R+K++LCP+SLPSP GQ NI
Sbjct: 364 ESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNI 423
Query: 158 HMFCSRRAGLLLSTMRALDNLGLDIQQAVISCFNGFAMDIFRAEQCKEGQDVHPEQIKAV 217
HMFC RR GLLL+TM+ALDNLGLD+QQAVISCFNGFA+D+FRAEQC+EGQ++ P+QIKAV
Sbjct: 424 HMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIKAV 483
Query: 218 LLDSAGFHGVM 228
L D+AG+ G++
Sbjct: 484 LFDTAGYAGMI 494
>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF
EXPRESSION 1); DNA binding / transcription activator/
transcription factor | chr3:9832953-9834790 REVERSE
Length = 494
Score = 284 bits (727), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 135/191 (70%), Positives = 154/191 (80%)
Query: 38 LPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNEL 97
+PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAI+YLKELLQRINDLHNEL
Sbjct: 304 MPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNEL 363
Query: 98 EXXXXXXXXXXXXXFHPLTPTPSALPSRIKDKLCPTSLPSPNGQPXXXXXXXXXXXXXNI 157
E FHPLTPTP L R+K++LCP+SLPSP GQ NI
Sbjct: 364 ESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNI 423
Query: 158 HMFCSRRAGLLLSTMRALDNLGLDIQQAVISCFNGFAMDIFRAEQCKEGQDVHPEQIKAV 217
HMFC RR GLLL+TM+ALDNLGLD+QQAVISCFNGFA+D+FRAEQC+EGQ++ P+QIKAV
Sbjct: 424 HMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIKAV 483
Query: 218 LLDSAGFHGVM 228
L D+AG+ G++
Sbjct: 484 LFDTAGYAGMI 494
>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | ICE1 (INDUCER OF CBF
EXPRESSION 1); DNA binding / transcription activator/
transcription factor | chr3:9832953-9834790 REVERSE
Length = 494
Score = 284 bits (727), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 135/191 (70%), Positives = 154/191 (80%)
Query: 38 LPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNEL 97
+PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAI+YLKELLQRINDLHNEL
Sbjct: 304 MPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNEL 363
Query: 98 EXXXXXXXXXXXXXFHPLTPTPSALPSRIKDKLCPTSLPSPNGQPXXXXXXXXXXXXXNI 157
E FHPLTPTP L R+K++LCP+SLPSP GQ NI
Sbjct: 364 ESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNI 423
Query: 158 HMFCSRRAGLLLSTMRALDNLGLDIQQAVISCFNGFAMDIFRAEQCKEGQDVHPEQIKAV 217
HMFC RR GLLL+TM+ALDNLGLD+QQAVISCFNGFA+D+FRAEQC+EGQ++ P+QIKAV
Sbjct: 424 HMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIKAV 483
Query: 218 LLDSAGFHGVM 228
L D+AG+ G++
Sbjct: 484 LFDTAGYAGMI 494
>AT1G12860.1 | Symbols: SCRM2, ICE2 | SCRM2 (SCREAM 2); DNA binding
/ transcription factor | chr1:4382223-4386392 FORWARD
Length = 828
Score = 274 bits (701), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 137/192 (71%), Positives = 151/192 (78%), Gaps = 6/192 (3%)
Query: 38 LPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNEL 97
+PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAI+YLKELLQRINDLH EL
Sbjct: 642 MPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTEL 701
Query: 98 EXXXXXXXXXXXXXFHPLTPTPSALPSRIKDKLCPTS-LPSPNGQPXXXXXXXXXXXXXN 156
E HPLTPTP L R+K++LCP+S LPSP GQ N
Sbjct: 702 ESTPPSSSS-----LHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAVN 756
Query: 157 IHMFCSRRAGLLLSTMRALDNLGLDIQQAVISCFNGFAMDIFRAEQCKEGQDVHPEQIKA 216
IHMFC RR GLLLSTMRALDNLGLD+QQAVISCFNGFA+D+FRAEQC+E DV PEQIKA
Sbjct: 757 IHMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCQEDHDVLPEQIKA 816
Query: 217 VLLDSAGFHGVM 228
VLLD+AG+ G++
Sbjct: 817 VLLDTAGYAGLV 828
>AT5G65640.1 | Symbols: bHLH093 | bHLH093 (beta HLH protein 93); DNA
binding / transcription factor | chr5:26237137-26238904
FORWARD
Length = 351
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 109/188 (57%), Gaps = 15/188 (7%)
Query: 39 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELE 98
P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR SILGDAI+Y+KELL +IN L +E +
Sbjct: 176 PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEEQ 235
Query: 99 XXXXXXXXXXXXXFHPLTPTPSALPSRIKDKLCPTSLPSPNGQPXXXXXXXXXXXXXNIH 158
L + ++ S++ L + P + +
Sbjct: 236 E---------------LGNSNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDRRDEDTRVD 280
Query: 159 MFCSRRAGLLLSTMRALDNLGLDIQQAVISCFNGFAMDIFRAEQCKEGQDVHPEQIKAVL 218
+ CS + GLLLST+ L+ LGL+I+Q VISCF+ F++ +E ++ + E IK L
Sbjct: 281 ICCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDFSLQASCSEGAEQRDFITSEDIKQAL 340
Query: 219 LDSAGFHG 226
+AG+ G
Sbjct: 341 FRNAGYGG 348
>AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:3341357-3342877 FORWARD
Length = 315
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 104/188 (55%), Gaps = 24/188 (12%)
Query: 39 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELE 98
P+KNLMAERRRRK+LNDRL +LRS+VPKI+KMDR SILGDAI+Y+KELL +IN L + +
Sbjct: 149 PSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQ 208
Query: 99 XXXXXXXXXXXXXFHPLTPTPSALPSRIKDKLCPTSLPSPNGQPXXXXXXXXXXXXXNIH 158
L S + + +K ++ +I
Sbjct: 209 ------ELGSNSHLSTLITNESMVRNSLKFEV------------------DQREVNTHID 244
Query: 159 MFCSRRAGLLLSTMRALDNLGLDIQQAVISCFNGFAMDIFRAEQCKEGQDVHPEQIKAVL 218
+ C + GL++ST+ L+ LGL+I+Q VISCF+ F++ E ++ V E K L
Sbjct: 245 ICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVTSEATKQAL 304
Query: 219 LDSAGFHG 226
+ +AG+ G
Sbjct: 305 IRNAGYGG 312
>AT2G16910.1 | Symbols: AMS | AMS (ABORTED MICROSPORES); DNA binding
/ transcription factor | chr2:7331721-7334077 FORWARD
Length = 571
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 94/193 (48%), Gaps = 13/193 (6%)
Query: 40 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELEX 99
AKNLMAERRRRKKLNDRLY LRS+VP+I+K+DRASILGDAI Y+KEL +L +ELE
Sbjct: 313 AKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEE 372
Query: 100 XXXXX------------XXXXXXXFHPLTPTPSALPSRIKDKLCPTSLPSPNGQPXXXXX 147
FHP S +PS +D S
Sbjct: 373 NSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVDV 432
Query: 148 XXXXXXXXNIHMFCSRRAGLLLSTMRALDNLGLDIQQAVISCFNGFAMDIFRAEQCKEGQ 207
+ + C + G M ALD+LGL++ A + + ++F+ E+ + +
Sbjct: 433 AQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVFKVEK-NDNE 491
Query: 208 DVHPEQIKAVLLD 220
V E ++ LL+
Sbjct: 492 MVQAEHVRNSLLE 504
>AT5G65640.2 | Symbols: bHLH093 | bHLH093 (beta HLH protein 93); DNA
binding / transcription factor | chr5:26237137-26238635
FORWARD
Length = 290
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 39 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNE 96
P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR SILGDAI+Y+KELL +IN L +E
Sbjct: 176 PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDE 233
>AT2G46510.1 | Symbols: ATAIB | ATAIB (ABA-INDUCIBLE BHLH-TYPE
TRANSCRIPTION FACTOR); DNA binding / transcription
factor | chr2:19091187-19092887 REVERSE
Length = 566
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 46/58 (79%)
Query: 39 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNE 96
P ++ AER+RR+KLN R Y LRSVVP ISKMD+AS+LGDAI Y+KEL +++ + +E
Sbjct: 393 PLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDE 450
>AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:14644108-14647449 FORWARD
Length = 225
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 47/58 (81%)
Query: 40 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNEL 97
+KN+++ER RR+KLN RL+ LRSVVP ISK+D+AS++ D+I+Y++EL+ + L E+
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEI 110
>AT5G46760.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:18974231-18976009 FORWARD
Length = 592
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 44/60 (73%)
Query: 39 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELE 98
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++ ++ E
Sbjct: 413 PLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKE 472
>AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:14644108-14645505 FORWARD
Length = 263
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 47/59 (79%)
Query: 39 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNEL 97
+KN+++ER RR+KLN RL+ LRSVVP ISK+D+AS++ D+I+Y++EL+ + L E+
Sbjct: 52 SSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEI 110
>AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:14644108-14647449 FORWARD
Length = 254
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 47/58 (81%)
Query: 40 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNEL 97
+KN+++ER RR+KLN RL+ LRSVVP ISK+D+AS++ D+I+Y++EL+ + L E+
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEI 110
>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
MYC2; DNA binding / transcription activator/
transcription factor | chr1:11799042-11800913 REVERSE
Length = 623
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 39 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNE 96
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++ +E
Sbjct: 450 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESE 507
>AT4G17880.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:9933702-9935471 REVERSE
Length = 589
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 44/60 (73%)
Query: 39 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELE 98
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++ ++ E
Sbjct: 414 PLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKE 473
>AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:14644108-14645168 FORWARD
Length = 184
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 47/58 (81%)
Query: 40 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNEL 97
+KN+++ER RR+KLN RL+ LRSVVP ISK+D+AS++ D+I+Y++EL+ + L E+
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEI 110
>AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:109595-111367 FORWARD
Length = 590
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 45 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELE 98
AER+RR+KLN R Y LRSVVP ISKMD+AS+LGDA+ Y+ EL ++ + E E
Sbjct: 437 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERE 490
>AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:109595-111367 FORWARD
Length = 590
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 45 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELE 98
AER+RR+KLN R Y LRSVVP ISKMD+AS+LGDA+ Y+ EL ++ + E E
Sbjct: 437 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERE 490
>AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:362230-363639 REVERSE
Length = 423
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 44/54 (81%)
Query: 45 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELE 98
AE++RR+KLN R Y LR++VPK+S+MD+AS+L DA+ Y++ L +I+DL E++
Sbjct: 253 AEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIK 306
>AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:23152361-23154872 FORWARD
Length = 247
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 40 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNEL 97
+KN+++ER RR+KLN RL+ LRSVVP I+KMD+ASI+ DAI Y++ L L E+
Sbjct: 53 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEI 110
>AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:23152361-23153293 FORWARD
Length = 226
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 40 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNEL 97
+KN+++ER RR+KLN RL+ LRSVVP I+KMD+ASI+ DAI Y++ L L E+
Sbjct: 54 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEI 111
>AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:23152361-23154556 FORWARD
Length = 219
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 40 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNEL 97
+KN+++ER RR+KLN RL+ LRSVVP I+KMD+ASI+ DAI Y++ L L E+
Sbjct: 54 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEI 111
>AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29 |
FRU (FER-LIKE REGULATOR OF IRON UPTAKE); DNA binding /
transcription factor | chr2:12004713-12005908 FORWARD
Length = 318
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 46/58 (79%)
Query: 40 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNEL 97
++ L++ERRRR ++ D+LY LRS+VP I+KMD+ASI+GDA+ Y++EL + L +++
Sbjct: 130 SRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDI 187
>AT4G09820.1 | Symbols: TT8 | TT8 (TRANSPARENT TESTA 8); DNA binding
/ transcription factor | chr4:6182067-6186261 FORWARD
Length = 518
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 43/54 (79%)
Query: 42 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHN 95
+++AERRRR+KLN++ LRS+VP ++KMD+ SILGD I Y+ L +R+++L N
Sbjct: 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELEN 417
>AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | EGL3 (ENHANCER OF
GLABRA 3); DNA binding / transcription factor |
chr1:23599809-23602734 FORWARD
Length = 596
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 8/158 (5%)
Query: 44 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELEXXXXX 103
++E++RR+KLN+R LRS++P ISK+D+ SIL D IEYL++L +R+ +L + E
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTE 467
Query: 104 XXXXXXXXFHPLTPTPSALPSRIKDKLCPTSLPSPNGQPXXXXXX--------XXXXXXX 155
P A + + K + + +P
Sbjct: 468 TRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRISSLGNEV 527
Query: 156 NIHMFCSRRAGLLLSTMRALDNLGLDIQQAVISCFNGF 193
I + C+ R G+LL M + +L LD S +G
Sbjct: 528 VIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDGL 565
>AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | EGL3 (ENHANCER OF
GLABRA 3); DNA binding / transcription factor |
chr1:23599809-23602734 FORWARD
Length = 596
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 8/158 (5%)
Query: 44 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELEXXXXX 103
++E++RR+KLN+R LRS++P ISK+D+ SIL D IEYL++L +R+ +L + E
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTE 467
Query: 104 XXXXXXXXFHPLTPTPSALPSRIKDKLCPTSLPSPNGQPXXXXXX--------XXXXXXX 155
P A + + K + + +P
Sbjct: 468 TRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRISSLGNEV 527
Query: 156 NIHMFCSRRAGLLLSTMRALDNLGLDIQQAVISCFNGF 193
I + C+ R G+LL M + +L LD S +G
Sbjct: 528 VIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDGL 565
>AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:9267599-9269002 FORWARD
Length = 467
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 45 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNE 96
AER+RR+KLN R Y LR+VVP ISKMD+AS+L DAI Y+ ++ ++I E
Sbjct: 324 AERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETE 375
>AT1G10610.1 | Symbols: | DNA binding / transcription factor |
chr1:3506463-3508752 FORWARD
Length = 441
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 44/61 (72%)
Query: 38 LPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNEL 97
+KNL +ER+RR+++N +Y LR+VVPKI+K+++ I DA++Y+ ELL L +EL
Sbjct: 261 FKSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDEL 320
Query: 98 E 98
+
Sbjct: 321 K 321
>AT5G41315.1 | Symbols: GL3, MYC6.2 | GL3 (GLABROUS 3); protein
binding / transcription factor | chr5:16529457-16532866
FORWARD
Length = 637
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 46 ERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHN 95
E++RR+KLN+R LR ++P I+K+D+ SIL D IEYL+EL +R+ +L +
Sbjct: 446 EKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELES 495
>AT5G46830.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:19002719-19004254 FORWARD
Length = 511
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 39 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELE 98
P ++ AER RR+KLN R Y LR+VVP +SKMD+ S+L DA+ Y+ EL + ++ ELE
Sbjct: 341 PLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENV--ELE 398
>AT4G21330.1 | Symbols: DYT1 | DYT1 (DYSFUNCTIONAL TAPETUM 1); DNA
binding / transcription factor | chr4:11349922-11350694
FORWARD
Length = 207
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 82/187 (43%), Gaps = 26/187 (13%)
Query: 42 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELEXXX 101
NL AERRRR+KL+ RL LRS VP ++ M +ASI+ DAI Y+ EL N++ N LE
Sbjct: 33 NLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQ---NNVKNLLE--- 86
Query: 102 XXXXXXXXXXFHPLTPTPSALPSRIKDKLCPTSLPSPN--------GQPXXXXXXXXXXX 153
FH + P + D + + + + G
Sbjct: 87 ---------TFHEMEEAPPEIDEEQTDPMIKPEVETSDLNEEMKKLGIEENVQLCKIGER 137
Query: 154 XXNIHMFCSRRAGLLLSTMRALDNLGLDIQQAVISCFNGFAMDIFRAEQCKEGQDVHPEQ 213
+ + +R G+ M + LG +I ++ NG A+ I + Q +E DV EQ
Sbjct: 138 KFWLKIITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNG-AILISASVQTQELCDV--EQ 194
Query: 214 IKAVLLD 220
K LL+
Sbjct: 195 TKDFLLE 201
>AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:13303014-13304661 FORWARD
Length = 458
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 37/49 (75%)
Query: 45 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDL 93
ER RR NDR + L++++P +K+DRASI+G+AI+Y+KELL+ I +
Sbjct: 251 TERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIEEF 299
>AT2G22770.1 | Symbols: NAI1 | NAI1; DNA binding / transcription
factor | chr2:9684858-9686321 FORWARD
Length = 320
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 45/59 (76%)
Query: 38 LPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNE 96
L ++++AER+RR+KLN+RL L +++P + K D+A++L DAI++LK+L +R+ L E
Sbjct: 129 LLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEE 187
>AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:17796362-17797647 REVERSE
Length = 328
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 42/55 (76%)
Query: 42 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNE 96
+++AER+RR+KL R L ++VP + KMD+AS+LGDA++++K L +R+ +L +
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQ 207
>AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:9672145-9673624 FORWARD
Length = 305
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 38/49 (77%)
Query: 42 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRI 90
+++AER+RR+KL R L +++P + KMD+AS+LGDAI+++K L + +
Sbjct: 127 HILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESV 175
>AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:9672145-9673624 FORWARD
Length = 304
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 38/49 (77%)
Query: 42 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRI 90
+++AER+RR+KL R L +++P + KMD+AS+LGDAI+++K L + +
Sbjct: 127 HILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESV 175
>AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:9678012-9679165 FORWARD
Length = 295
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 13/163 (7%)
Query: 38 LPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNEL 97
L ++++AER+RR+KL+++ L +++P + K D+ +IL DAI +K+L +++ L E
Sbjct: 116 LAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEK 175
Query: 98 EXXXXXXX---XXXXXXFHPLTPTPSALPSRIKDKLCPTSLPSPNGQPXXXXXXXXXXXX 154
E F P S C S+ Q
Sbjct: 176 EATRQMESMILVKKSKVFFDEEPNLS----------CSPSVHIEFDQALPEIEAKISQND 225
Query: 155 XNIHMFCSRRAGLLLSTMRALDNLGLDIQQAVISCFNGFAMDI 197
I + C + G +++ + ++N L I+ +++ F +DI
Sbjct: 226 ILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDI 268
>AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:14218329-14219887 FORWARD
Length = 340
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%)
Query: 44 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLH 94
++ERRRR+K+N+ + L+ ++P+ +K DR+S+L D IEY+K L +I H
Sbjct: 284 LSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQGKH 334
>AT4G28815.1 | Symbols: | transcription regulator |
chr4:14228719-14230288 FORWARD
Length = 307
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 44 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDL 93
+AERRRR+K+N+R+ L+ ++P+ +K + S+L D IEY+K L +IN
Sbjct: 157 LAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQINQF 206
>AT1G06170.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:1885146-1886564 REVERSE
Length = 420
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 45 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDL 93
ER RR DR L++++P +K DRASI+G+AI+Y+KELL+ I++
Sbjct: 220 TERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRTIDEF 268
>AT1G06170.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:1885146-1886564 REVERSE
Length = 420
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 45 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDL 93
ER RR DR L++++P +K DRASI+G+AI+Y+KELL+ I++
Sbjct: 220 TERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRTIDEF 268
>AT4G28800.1 | Symbols: | transcription factor |
chr4:14221970-14224075 FORWARD
Length = 445
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 36/50 (72%)
Query: 44 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDL 93
+AERRRR+K+N+++ L+ ++P+ +K + S L DAIEY+K L +I +
Sbjct: 262 LAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGM 311
>AT4G00050.1 | Symbols: UNE10 | UNE10 (unfertilized embryo sac 10);
DNA binding / transcription factor | chr4:17863-19848
FORWARD
Length = 399
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 35/47 (74%)
Query: 45 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRIN 91
+ER+RR K+N R+ L+ +VP SK D+AS+L + IEYLK+L +++
Sbjct: 221 SERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVS 267
>AT4G36930.1 | Symbols: SPT | SPT (SPATULA); DNA binding /
transcription factor | chr4:17414167-17415945 FORWARD
Length = 373
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 36/43 (83%)
Query: 44 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKEL 86
++E+RRR ++N+++ L+S++P +K D+AS+L +AIEYLK+L
Sbjct: 204 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQL 246
>AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:13296655-13298139 FORWARD
Length = 428
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 41 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDL 93
K ER RR LN+R L+ ++P SK DRASIL D I+Y+ EL +R+++L
Sbjct: 214 KPFTTERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSEL 266
>AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | PIF3 (PHYTOCHROME
INTERACTING FACTOR 3); DNA binding / protein binding /
transcription factor/ transcription regulator |
chr1:3077216-3079367 FORWARD
Length = 524
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 35/43 (81%)
Query: 44 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKEL 86
++ERRRR ++N+++ L+ ++P +K+D+AS+L +AIEYLK L
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSL 392
>AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | PIF3 (PHYTOCHROME
INTERACTING FACTOR 3); DNA binding / protein binding /
transcription factor/ transcription regulator |
chr1:3077216-3079367 FORWARD
Length = 524
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 35/43 (81%)
Query: 44 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKEL 86
++ERRRR ++N+++ L+ ++P +K+D+AS+L +AIEYLK L
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSL 392
>AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:14218329-14220173 FORWARD
Length = 413
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 36/48 (75%)
Query: 44 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRIN 91
++ERRRR+K+N+ + L+ ++P+ +K DR+S+L D IEY+K L +I
Sbjct: 284 LSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQ 331
>AT5G67110.1 | Symbols: ALC | ALC (ALCATRAZ); DNA binding /
transcription factor | chr5:26785332-26786338 REVERSE
Length = 210
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 38/50 (76%)
Query: 44 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDL 93
++E++RR K+N+++ L+ ++P +K D+AS+L +AIEYLK+L ++ L
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>AT4G38070.1 | Symbols: | bHLH family protein |
chr4:17876535-17882569 FORWARD
Length = 1513
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 45 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDL 93
AERRRR ++N + LR+++P + K D+AS+LG+ + Y EL + + D+
Sbjct: 1356 AERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKMVQDI 1404
>AT2G20180.2 | Symbols: PIL5 | PIL5 (PHYTOCHROME INTERACTING FACTOR
3-LIKE 5); DNA binding / phytochrome binding /
transcription factor | chr2:8704525-8706538 REVERSE
Length = 478
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 37/47 (78%)
Query: 44 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRI 90
++ER+RR ++N+R+ L+ ++P+ +K D+AS+L +AIEY+K L +I
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQI 337
>AT2G20180.1 | Symbols: PIL5, PIF1 | PIL5 (PHYTOCHROME INTERACTING
FACTOR 3-LIKE 5); DNA binding / phytochrome binding /
transcription factor | chr2:8704525-8706237 REVERSE
Length = 407
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 37/47 (78%)
Query: 44 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRI 90
++ER+RR ++N+R+ L+ ++P+ +K D+AS+L +AIEY+K L +I
Sbjct: 220 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQI 266
>AT2G40200.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:16791098-16792027 FORWARD
Length = 254
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 44 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQR 89
+AE+RRR ++N L LR +VP K+D+A++L IE +KEL Q+
Sbjct: 69 LAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQK 114
>AT3G24140.1 | Symbols: FMA | FMA (FAMA); DNA binding /
transcription activator/ transcription factor |
chr3:8715525-8717772 REVERSE
Length = 414
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
Query: 43 LMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIEYLKELLQ 88
+ ER RRK++N+ L +LRS++P + + D+ASI+G AIE+++EL Q
Sbjct: 200 IAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQ 247