Jatropha Genome Database

JcCB0238051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0238051.10 - phase: 1 /partial
         (181 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44970.1 | Symbols:  | lipase-related | chr2:18548999-1855201...   135   1e-32
AT2G44970.2 | Symbols:  | lipase-related | chr2:18548999-1855201...   134   3e-32

>AT2G44970.1 | Symbols:  | lipase-related | chr2:18548999-18552019
           REVERSE
          Length = 503

 Score =  135 bits (341), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/156 (50%), Positives = 98/156 (62%), Gaps = 12/156 (7%)

Query: 1   EHSPRHSGNST--HAQELVTFSSAQTEEFPDGDCASSRQNHSTFPEPSTSIKPSTSATAA 58
           ++S  + G  T  H  EL+  +S      P   C S  +  ST  E STS   S S    
Sbjct: 73  DYSVEYGGKDTISHPHELLRSTSGVDGNSPVSVCISPGERFSTSSEASTSDANSPS---- 128

Query: 59  PSIQITRTSSDGPSQNNSAIVPSSHSGQNGISIFQGLIERARRTVRGSADDIGWMQRASG 118
                 R S++   Q  +AIV S+    NGIS+FQGLIERARRTVRGSADDIGW+QRA  
Sbjct: 129 ------RESTEILPQATNAIVTSNRLNLNGISMFQGLIERARRTVRGSADDIGWLQRAPE 182

Query: 119 MPPVEDGTGRFMEVLDNIRHGLHKLPNSMVYLLVPG 154
           MPPVEDGT RF ++L++I HG+H+LPN++VYLLVPG
Sbjct: 183 MPPVEDGTDRFNKILEDIGHGVHRLPNTVVYLLVPG 218


>AT2G44970.2 | Symbols:  | lipase-related | chr2:18548999-18552019
           REVERSE
          Length = 502

 Score =  134 bits (337), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/144 (52%), Positives = 93/144 (64%), Gaps = 10/144 (6%)

Query: 11  THAQELVTFSSAQTEEFPDGDCASSRQNHSTFPEPSTSIKPSTSATAAPSIQITRTSSDG 70
           +H  EL+  +S      P   C S  +  ST  E STS   S S          R S++ 
Sbjct: 84  SHPHELLRSTSGVDGNSPVSVCISPGERFSTSSEASTSDANSPS----------RESTEI 133

Query: 71  PSQNNSAIVPSSHSGQNGISIFQGLIERARRTVRGSADDIGWMQRASGMPPVEDGTGRFM 130
             Q  +AIV S+    NGIS+FQGLIERARRTVRGSADDIGW+QRA  MPPVEDGT RF 
Sbjct: 134 LPQATNAIVTSNRLNLNGISMFQGLIERARRTVRGSADDIGWLQRAPEMPPVEDGTDRFN 193

Query: 131 EVLDNIRHGLHKLPNSMVYLLVPG 154
           ++L++I HG+H+LPN++VYLLVPG
Sbjct: 194 KILEDIGHGVHRLPNTVVYLLVPG 217