Jatropha Genome Database
- JcCB0237641.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0237641.10 - phase: 0
(371 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G36810.1 | Symbols: GGPS1 | GGPS1 (GERANYLGERANYL PYROPHOSPHA... 465 e-131
AT2G18620.1 | Symbols: | geranylgeranyl pyrophosphate synthase,... 442 e-124
AT3G29430.1 | Symbols: | geranylgeranyl pyrophosphate synthase,... 383 e-106
AT2G23800.1 | Symbols: GGPS2, GGPS5 | GGPS2 (GERANYLGERANYL PYRO... 382 e-106
AT3G14550.1 | Symbols: GGPS3 | GGPS3 (GERANYLGERANYL PYROPHOSPHA... 377 e-105
AT2G18640.1 | Symbols: GGPS4 | GGPS4 (GERANYLGERANYL PYROPHOSPHA... 377 e-105
AT3G20160.1 | Symbols: | geranylgeranyl pyrophosphate synthase,... 374 e-104
AT3G14530.1 | Symbols: | geranylgeranyl pyrophosphate synthase,... 373 e-103
AT3G32040.1 | Symbols: | geranylgeranyl pyrophosphate synthase,... 372 e-103
AT3G14510.1 | Symbols: | geranylgeranyl pyrophosphate synthase,... 350 6e-97
AT1G49530.1 | Symbols: GGPS6 | GGPS6 (geranylgeranyl pyrophospha... 344 5e-95
AT4G38460.1 | Symbols: GGR | GGR (geranylgeranyl reductase); far... 214 8e-56
AT1G78510.1 | Symbols: SPS1 | SPS1 (solanesyl diphosphate syntha... 121 7e-28
AT1G78510.2 | Symbols: SPS1 | SPS1 (solanesyl diphosphate syntha... 121 8e-28
AT1G17050.1 | Symbols: SPS2 | SPS2 (Solanesyl diphosphate syntha... 116 2e-26
AT2G34630.2 | Symbols: GPPS, GPS1 | geranyl diphosphate synthase... 85 7e-17
AT2G34630.1 | Symbols: GPPS, GPS1 | geranyl diphosphate synthase... 84 2e-16
AT3G29420.1 | Symbols: | geranylgeranyl pyrophosphate synthase-... 60 2e-09
>AT4G36810.1 | Symbols: GGPS1 | GGPS1 (GERANYLGERANYL PYROPHOSPHATE
SYNTHASE 1); farnesyltranstransferase |
chr4:17343513-17344628 FORWARD
Length = 371
Score = 465 bits (1197), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/376 (64%), Positives = 286/376 (76%), Gaps = 10/376 (2%)
Query: 1 MTSVNLGSWFHSCCVLNQATRS-RSNSKSFSLPFNPLKRLSIPLFYENSKRPSSSISAII 59
M SV LGSW + S + S+S S P K +S SKR SS S+I+
Sbjct: 1 MASVTLGSWIVVHHHNHHHPSSILTKSRSRSCPITLTKPISF-----RSKRTVSSSSSIV 55
Query: 60 TREEETLQDEQNNGSTPPFDFKSYMRQKAASINQALEAAVSVREPAKIHESMRYSLLAGG 119
+ T +D FDF SY+ KA +N+AL++AV +REP KIHE+MRYSLLAGG
Sbjct: 56 SSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGG 115
Query: 120 KRVRPALCLAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIV 179
KRVRP LC+AACELVGG ES AMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNH V
Sbjct: 116 KRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV 175
Query: 180 FGENVAVLAGDALLAFAFEHIAVSTLN--VPPARVVRAIGELAKAIGAEGLVAGQVVDIC 237
FGE+VAVLAGDALL+FAFEH+A +T + V P RVVRA+GELAKAIG EGLVAGQVVDI
Sbjct: 176 FGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDIS 235
Query: 238 SEG--LSEVDLEKLEFIHVHKTAKXXXXXXXXXXXXXXXTDEEVEKLRKYARDIGLLFQV 295
SEG L++V LE LEFIH+HKTA +D+E+E+LRK+AR IGLLFQV
Sbjct: 236 SEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQV 295
Query: 296 VDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAQKLNKEAQEQLAGFDHEK 355
VDDILDVTKSS+ELGKTAGKDL+ADK+TYPK++G+EKSREFA+KLN+EA++QL GFD +K
Sbjct: 296 VDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDK 355
Query: 356 AAPLIALANYIAYRQN 371
APL+ALANYIAYRQN
Sbjct: 356 VAPLLALANYIAYRQN 371
>AT2G18620.1 | Symbols: | geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative |
chr2:8078317-8079360 FORWARD
Length = 347
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/338 (66%), Positives = 267/338 (78%), Gaps = 15/338 (4%)
Query: 40 SIPLFYENS----KRPSSSISAIITREEETLQDEQNNGSTPPFDFKSYMRQKAASINQAL 95
SIP F + +R S++ ++ R+E + + FDF SYM KA ++N+AL
Sbjct: 19 SIPGFIKIQPFLLRRKLSTVLSVTARDEGIIHNH--------FDFTSYMIGKANAVNEAL 70
Query: 96 EAAVSVREPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNESMAMPAACAVEMIHTMS 155
++AVS+REP KIHE++RYSLLA GKRVRP LC+AACELVGG ES+A+PAACAVEMIHTMS
Sbjct: 71 DSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGEESVALPAACAVEMIHTMS 130
Query: 156 LIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAFEHIAVSTLNVPPARVVRA 215
LIHDDLPCMDNDDLRRGKPTNH VFGE+VAVLAGDAL++FAFEH+A ST V PARVVRA
Sbjct: 131 LIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHLATST-AVSPARVVRA 189
Query: 216 IGELAKAIGAEGLVAGQVVDICSEGL--SEVDLEKLEFIHVHKTAKXXXXXXXXXXXXXX 273
IGELAKAIG++GLVAGQVVD+ S G+ ++V LE LEFIHVHKTA
Sbjct: 190 IGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVGG 249
Query: 274 XTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKS 333
+DEEVEKLR++AR IGLLFQVVDDILDVTKSS+ELGKTAGKDL+ADK+TYPKL+G+EKS
Sbjct: 250 GSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLMGLEKS 309
Query: 334 REFAQKLNKEAQEQLAGFDHEKAAPLIALANYIAYRQN 371
++FA KL +A EQL GFD + PL+ALANYIA RQN
Sbjct: 310 KDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKRQN 347
>AT3G29430.1 | Symbols: | geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative |
chr3:11311427-11312604 FORWARD
Length = 357
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/352 (59%), Positives = 264/352 (75%), Gaps = 5/352 (1%)
Query: 25 NSKSFSLPFNPLKRLSIPLFYENSKRPSSSISAIITREEETL--QDEQNNGSTPPFDFKS 82
+S S + F + S+ F KR S+S ++ + + + ++N FDFKS
Sbjct: 6 SSSSLFIQFRGRRYNSLSSFNNLQKRTVLSLSCALSSQGGDMIPPEGKSNDRNSAFDFKS 65
Query: 83 YMRQKAASINQALEAAVSVREPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNESMAM 142
YM +KA S++ AL +V ++EP I E++RYSLLAGGKRVRP LC+AACELVGG+E+ AM
Sbjct: 66 YMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAM 125
Query: 143 PAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAFEHIA- 201
AACAVEMIHT SLIHDDLPCMD+ DLRRGKPTNH FGE++AVLAGDALLA AFEH+
Sbjct: 126 SAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLALAFEHMTF 185
Query: 202 VSTLNVPPARVVRAIGELAKAIGAEGLVAGQVVDICSEGLS--EVDLEKLEFIHVHKTAK 259
VS V P R++RA+ ELAKAIG +GLVAGQV D+CS+GL+ +V LE+LEFIH+HKTA
Sbjct: 186 VSNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFIHLHKTAA 245
Query: 260 XXXXXXXXXXXXXXXTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVA 319
T+EE+EKLRKYAR IGLLFQVVDDILDVT+S++ELGKTAGKD++A
Sbjct: 246 LLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAGKDVMA 305
Query: 320 DKVTYPKLLGIEKSREFAQKLNKEAQEQLAGFDHEKAAPLIALANYIAYRQN 371
K+TYP+L+G+E+SRE A+KL +EA EQL GFD +KAAPL+ALA+YIA R N
Sbjct: 306 GKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSDKAAPLVALASYIACRHN 357
>AT2G23800.1 | Symbols: GGPS2, GGPS5 | GGPS2 (GERANYLGERANYL
PYROPHOSPHATE SYNTHASE 2); farnesyltranstransferase |
chr2:10131619-10132749 REVERSE
Length = 376
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/294 (63%), Positives = 227/294 (77%), Gaps = 4/294 (1%)
Query: 78 FDFKSYMRQKAASINQALEAAVSVREPAKIHESMRYSLLAGGKRVRPALCLAACELVGGN 137
F+F YM KA S+N+ALE A+ V EP KIHE+MRY++LA GKRVRP LCLA+CELVGG
Sbjct: 83 FEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQ 142
Query: 138 ESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAF 197
E+ AMPAACAVEMIHTMSLI DDLPCMDNDDLRRGKPT H V+GE VA+L+G ALL+ AF
Sbjct: 143 ENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAF 202
Query: 198 EHIAVSTLNVPPARVVRAIGELAKAIGAEGLVAGQVVDICSEG--LSEVDLEKLEFIHVH 255
EH+ +T + R+V A+ ELA++IG GLVAGQ +DI SEG L+EV LE LEFIHVH
Sbjct: 203 EHM--TTAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVH 260
Query: 256 KTAKXXXXXXXXXXXXXXXTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGK 315
KTA +DEE+E +RK+AR IGLLFQVVDDILD TKSS+ELGKTAGK
Sbjct: 261 KTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGK 320
Query: 316 DLVADKVTYPKLLGIEKSREFAQKLNKEAQEQLAGFDHEKAAPLIALANYIAYR 369
D +A K+TYPKL+G+EKS+EF ++L K+A++ L GF EK APL+AL +IA R
Sbjct: 321 DQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANR 374
>AT3G14550.1 | Symbols: GGPS3 | GGPS3 (GERANYLGERANYL PYROPHOSPHATE
SYNTHASE 3); farnesyltranstransferase |
chr3:4884754-4885945 REVERSE
Length = 360
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/352 (59%), Positives = 260/352 (73%), Gaps = 20/352 (5%)
Query: 40 SIPLFYENSKRPSSSISAIITREEET-------LQDEQNNGSTPP----------FDFKS 82
S LF ++ R +SIS++ + ++ T L + PP FDFK
Sbjct: 9 SFSLFIQSRGRRDNSISSVKSLKKRTGLSPSSALTSQGGRDMIPPEGKCNDHNSAFDFKL 68
Query: 83 YMRQKAASINQALEAAVSVREPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNESMAM 142
YM +KA S+N AL+ +V +REP + E++RYSLLAGGKRVRP LC+A CELVGG+E+ AM
Sbjct: 69 YMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAM 128
Query: 143 PAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAFEHIA- 201
AACAVEMIHT SLIHDDLPCMDN DLRRGKPTNH V+GE++AVLAGDALLA AFEH+
Sbjct: 129 SAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTF 188
Query: 202 VSTLNVPPARVVRAIGELAKAIGAEGLVAGQVVDICSEGLS--EVDLEKLEFIHVHKTAK 259
VS+ V P R++RA+ ELA+AIG GLVAGQ++D+ SE L+ +V LE LEFIH+HKTA
Sbjct: 189 VSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAA 248
Query: 260 XXXXXXXXXXXXXXXTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVA 319
T+EE+EKLRKYAR IGLLFQVVDDILDVTKS++ELGKTAGKD++A
Sbjct: 249 LLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMA 308
Query: 320 DKVTYPKLLGIEKSREFAQKLNKEAQEQLAGFDHEKAAPLIALANYIAYRQN 371
K+TYP+L+G+E+S+E A+KL +EA+EQL GFD KAAPL+ALA+YIA R N
Sbjct: 309 GKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>AT2G18640.1 | Symbols: GGPS4 | GGPS4 (GERANYLGERANYL PYROPHOSPHATE
SYNTHASE 4); farnesyltranstransferase |
chr2:8083754-8084872 REVERSE
Length = 372
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/296 (62%), Positives = 230/296 (77%), Gaps = 4/296 (1%)
Query: 78 FDFKSYMRQKAASINQALEAAVSVREPAKIHESMRYSLLAGGKRVRPALCLAACELVGGN 137
FDFK YM KA +IN+AL+ A+ + EP IH++MRY++LAGGKRVRP LCLAACELVGG
Sbjct: 79 FDFKPYMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGE 138
Query: 138 ESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAF 197
E +A+ AACAVEMIHTMSLI DDLPCMDNDDLRRGKPT H VFGE+VA+L+G ALLA AF
Sbjct: 139 ERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAF 198
Query: 198 EHIAVSTLNVPPARVVRAIGELAKAIGAEGLVAGQVVDICSEGL--SEVDLEKLEFIHVH 255
EH+ + +V ++VRA+ ELAK+IG +GLVAGQ D+ SEGL ++V LE LE+IHVH
Sbjct: 199 EHL--TEADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVH 256
Query: 256 KTAKXXXXXXXXXXXXXXXTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGK 315
KT T++E+EK+R +AR IGLLFQVVDDILD TKSS+ELGKTAGK
Sbjct: 257 KTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGK 316
Query: 316 DLVADKVTYPKLLGIEKSREFAQKLNKEAQEQLAGFDHEKAAPLIALANYIAYRQN 371
D VA K+TYPK++G+EKS+EF +KL ++A+E L GFD +K PLIAL N+IA R +
Sbjct: 317 DKVAGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFDSDKVKPLIALTNFIANRNH 372
>AT3G20160.1 | Symbols: | geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative |
chr3:7038995-7040029 FORWARD
Length = 344
Score = 374 bits (960), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/299 (61%), Positives = 228/299 (76%), Gaps = 7/299 (2%)
Query: 78 FDFKSYMRQKAASINQALEAAVSVREPA-KIHESMRYSLLAGGKRVRPALCLAACELVGG 136
F F SYM KA S+N+ALE AV +REP KI E+MRY+LL+ GKRVRP LCLAACELVGG
Sbjct: 48 FKFMSYMVNKAKSVNKALEEAVPLREPELKIREAMRYTLLSDGKRVRPMLCLAACELVGG 107
Query: 137 NESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFA 196
ES AM AACA+EM+H SLI DDLPCMDND LRRGKPTNHIVFGE++A+LA AL+A A
Sbjct: 108 QESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALA 167
Query: 197 FEHIAVSTL-NVPPARVVRAIGELAKAIGAEGLVAGQVVDICSEGL---SEVDLEKLEFI 252
+ ST +VPP R+++ + E+ KA+ EGLVAGQ D+ EG+ S+ LE LEFI
Sbjct: 168 VQKTTSSTFADVPPERILKTVQEMVKAV--EGLVAGQQADLAGEGMRFDSDTGLEHLEFI 225
Query: 253 HVHKTAKXXXXXXXXXXXXXXXTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKT 312
H+HKTA +DEE+E+LR YAR IGL+FQVVDD+LDVTKSS+ELGKT
Sbjct: 226 HIHKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKT 285
Query: 313 AGKDLVADKVTYPKLLGIEKSREFAQKLNKEAQEQLAGFDHEKAAPLIALANYIAYRQN 371
AGKDL+A K+TYP+L+G+EKS+E+A++LN EA+E L GFD +K APL++LA+YI RQN
Sbjct: 286 AGKDLIAGKLTYPRLMGVEKSKEYAERLNIEAREHLLGFDIDKVAPLVSLADYIVNRQN 344
>AT3G14530.1 | Symbols: | geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative |
chr3:4879293-4880448 REVERSE
Length = 360
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/329 (62%), Positives = 256/329 (77%), Gaps = 6/329 (1%)
Query: 49 KRPSSSISAIITREE--ETLQDE-QNNGSTPPFDFKSYMRQKAASINQALEAAVSVREPA 105
KR S+S+ +T ++ +Q E ++N + FDFK YM +KA S+N AL+ +V + +P
Sbjct: 32 KRTVLSLSSALTSQDAGHMIQPEGKSNDNNSAFDFKLYMIRKAESVNAALDVSVPLLKPL 91
Query: 106 KIHESMRYSLLAGGKRVRPALCLAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMD 165
I E++RYSLLAGGKRVRP LC+AACELVGG+E+ AM AACAVEMIHT SLIHDDLPCMD
Sbjct: 92 TIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMD 151
Query: 166 NDDLRRGKPTNHIVFGENVAVLAGDALLAFAFEHIA-VSTLNVPPARVVRAIGELAKAIG 224
N DLRRGKPTNH V+GE++AVLAGDALLA AFEH+ VS+ V P +++RA+ ELA+AIG
Sbjct: 152 NADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPEKMIRAVVELARAIG 211
Query: 225 AEGLVAGQVVDICSEGLS--EVDLEKLEFIHVHKTAKXXXXXXXXXXXXXXXTDEEVEKL 282
GLVAGQ++D+ SE L+ +V LE LEFIH+HKTA T++E+EKL
Sbjct: 212 TTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEQEIEKL 271
Query: 283 RKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAQKLNK 342
RKYAR IGLLFQVVDDILDVTKS++ELGKTAGKD++A K+TYP+L+G+E SRE A+KL +
Sbjct: 272 RKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLEGSREVAEKLRR 331
Query: 343 EAQEQLAGFDHEKAAPLIALANYIAYRQN 371
EA+EQL GFD KAAPL+ALA+YIA R N
Sbjct: 332 EAEEQLLGFDPSKAAPLVALASYIACRHN 360
>AT3G32040.1 | Symbols: | geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative |
chr3:13047822-13049009 REVERSE
Length = 360
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/338 (60%), Positives = 255/338 (75%), Gaps = 6/338 (1%)
Query: 40 SIPLFYENSKRPSSSISAIITRE---EETLQDEQNNGSTPPFDFKSYMRQKAASINQALE 96
SI F KR S+S +T + + ++N FDFKSYM +KA S++ AL
Sbjct: 23 SILSFNNLQKRTVLSLSCALTSQGGKDMIPPKGKSNDRNFAFDFKSYMIRKAESVSMALN 82
Query: 97 AAVSVREPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNESMAMPAACAVEMIHTMSL 156
+V ++P I E++RYSLLAGGKRVRP LC+AACELVGG+E+ AM AACAVEMIHT SL
Sbjct: 83 VSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSL 142
Query: 157 IHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAFEHIA-VSTLNVPPARVVRA 215
IHDDLPCMD+ DLRRGKPTNH VFGE++AVLAGDALLA AFEH+ VS+ V P R++R+
Sbjct: 143 IHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAFEHMTVVSSGLVAPERMIRS 202
Query: 216 IGELAKAIGAEGLVAGQVVDICSEGLS--EVDLEKLEFIHVHKTAKXXXXXXXXXXXXXX 273
+ ELAKAIG +GLVAGQV D+CS+GL+ +V LE+LEFIH+HKTA
Sbjct: 203 VTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHLHKTAALLEAAAVLGAIIGG 262
Query: 274 XTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKS 333
T+EE++KLRKY R IGLLFQVVDDI+DVT+S++ELGKTAGKD++A K+TYP+L+G+E+S
Sbjct: 263 GTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGKDVMARKLTYPRLIGLERS 322
Query: 334 REFAQKLNKEAQEQLAGFDHEKAAPLIALANYIAYRQN 371
RE A+KL +EA EQL GFD K APL+ALA+YIA R N
Sbjct: 323 REVAEKLRREAAEQLLGFDSNKVAPLVALASYIACRHN 360
>AT3G14510.1 | Symbols: | geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative |
chr3:4867378-4868305 REVERSE
Length = 284
Score = 350 bits (899), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 185/277 (66%), Positives = 228/277 (82%), Gaps = 3/277 (1%)
Query: 98 AVSVREPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNESMAMPAACAVEMIHTMSLI 157
+V +REP + E++RYSLLAGGKRVRP LC+A CELVGG+E+ AM AACAVEMIHT SLI
Sbjct: 8 SVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLI 67
Query: 158 HDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAFEHIA-VSTLNVPPARVVRAI 216
HDDLPCMDN DLRRGKPTNH VFGE++AVLAGDALLA AFEH+ VS+ V R++RA+
Sbjct: 68 HDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRAV 127
Query: 217 GELAKAIGAEGLVAGQVVDICSEGLS--EVDLEKLEFIHVHKTAKXXXXXXXXXXXXXXX 274
ELA+AIG +GLVAGQVVD+ SE L+ +V LE+LEFIH+HKTA
Sbjct: 128 VELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGG 187
Query: 275 TDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSR 334
T+EE+EKLRKYAR IGLLFQVVDDILDVTKS++ELGKTAGKD++A K+TYP+L+G+E+SR
Sbjct: 188 TEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSR 247
Query: 335 EFAQKLNKEAQEQLAGFDHEKAAPLIALANYIAYRQN 371
E A+KL++EA+EQL GF+ +KAAPL+ALA+YI+ R +
Sbjct: 248 EVAEKLSREAEEQLLGFESDKAAPLVALASYISCRND 284
>AT1G49530.1 | Symbols: GGPS6 | GGPS6 (geranylgeranyl pyrophosphate
synthase 6); farnesyltranstransferase |
chr1:18332529-18333539 FORWARD
Length = 336
Score = 344 bits (883), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 224/306 (73%), Gaps = 13/306 (4%)
Query: 79 DFKSYMRQKAASINQALEAA-------VSVREPA-KIHESMRYSLLAGGKRVRPALCLAA 130
+F SYM+ KA SIN+AL+ + V + EP ++H++MRY+LL GGKRVRP LCL A
Sbjct: 31 EFISYMKNKAKSINKALDNSIPLCNNFVPLWEPVLEVHKAMRYTLLPGGKRVRPMLCLVA 90
Query: 131 CELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGD 190
CELVGG ES AMPAACAVEMIH SLI DDLPCMD+D LRRGKPTNH VFGE ++LA +
Sbjct: 91 CELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILASN 150
Query: 191 ALLAFAFEH-IAVSTLNVPPARVVRAIGELAKAIGAEGLVAGQVVDICSEGLS----EVD 245
AL + A + +A ++L V RV+RA+ E+A+A+G EGLVAGQ D+ E +S + +
Sbjct: 151 ALRSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDE 210
Query: 246 LEKLEFIHVHKTAKXXXXXXXXXXXXXXXTDEEVEKLRKYARDIGLLFQVVDDILDVTKS 305
L LE +HVHKTA +DEE+E+L+ YAR +GL+FQV+DD+LD TKS
Sbjct: 211 LRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKS 270
Query: 306 SQELGKTAGKDLVADKVTYPKLLGIEKSREFAQKLNKEAQEQLAGFDHEKAAPLIALANY 365
S+ELGKTAGKDL+ K+TYPK++G++ +RE+A++LN+EAQE L GFD +K PL++LA+Y
Sbjct: 271 SEELGKTAGKDLITGKLTYPKVMGVDNAREYAKRLNREAQEHLQGFDSDKVVPLLSLADY 330
Query: 366 IAYRQN 371
I RQN
Sbjct: 331 IVKRQN 336
>AT4G38460.1 | Symbols: GGR | GGR (geranylgeranyl reductase);
farnesyltranstransferase | chr4:17994849-17995974
FORWARD
Length = 326
Score = 214 bits (545), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 108/240 (45%), Positives = 147/240 (61%), Gaps = 9/240 (3%)
Query: 78 FDFKSYMRQKAASINQALEAAVSVREPAKIHESMRYSLLA-GGKRVRPALCLAACELVGG 136
FD ++Y INQ L+ A+ V+ PA I+E+MRYS+LA G KR P +C+AACEL GG
Sbjct: 45 FDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGG 104
Query: 137 NESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFA 196
+ A P ACA+EM+H SLIHDDLPCMD+D +RRGKP+NH V+G +A+LAGDAL A
Sbjct: 105 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLA 164
Query: 197 FEHIAVSTLN--VPPARVVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVDLEKLEFIHV 254
F+HI T VP A ++R I E+A+ +G+ G+ AGQ VD+ E L F+
Sbjct: 165 FQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDL------EGGPFPLSFVQE 218
Query: 255 HKTAKXXXXXXXXXXXXXXXTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAG 314
K T++E++ LR+Y R +G+L+QVVDDI + K S + G G
Sbjct: 219 KKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGAEKG 278
>AT1G78510.1 | Symbols: SPS1 | SPS1 (solanesyl diphosphate synthase
1); trans-octaprenyltranstransferase |
chr1:29535410-29537163 REVERSE
Length = 406
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 142/299 (47%), Gaps = 32/299 (10%)
Query: 54 SISAIITREEE-TLQDEQNNGSTPPFDFKSYMRQKAA-------------SINQALEAAV 99
S A+ T+ +E +L + T FD K +Q + ++N L + V
Sbjct: 47 SCKAVPTKSKEISLLNGIGQSQTVSFDLKQESKQPISLVTLFELVAVDLQTLNDNLLSIV 106
Query: 100 SVREPAKIHESMRYSLLAGGKRVRPALCL----AACELVGGNESMAMPAACA--VEMIHT 153
P I + + AGGKR+RP L A EL G E A +EMIHT
Sbjct: 107 GAENPVLISAAEQI-FGAGGKRMRPGLVFLVSHATAELAGLKELTTEHRRLAEIIEMIHT 165
Query: 154 MSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAFEHIAVSTLNVPPARVV 213
SLIHDD+ +D D+RRGK T H +FG VAVLAGD + A A ++A N+ V+
Sbjct: 166 ASLIHDDV--LDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLA----NLENLEVI 219
Query: 214 RAIGELAKAIGAEGLVAGQVVDICSEGLSEVDLEKLEFIHVHKTAKXXXXXXXXXXXXXX 273
+ I ++ K + + + C L E L+ +KTA
Sbjct: 220 KLISQVIKDFASGEIKQASSLFDCDTKLDEYLLKSF-----YKTASLVAASTKGAAIFSR 274
Query: 274 XTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEK 332
+ E++ ++ +++GL FQ+VDDILD T+S+++LGK AG DL +T P + +E+
Sbjct: 275 VEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTAPVIFALER 333
>AT1G78510.2 | Symbols: SPS1 | SPS1 (solanesyl diphosphate synthase
1); trans-octaprenyltranstransferase |
chr1:29535410-29537042 REVERSE
Length = 367
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 125/249 (50%), Gaps = 18/249 (7%)
Query: 90 SINQALEAAVSVREPAKIHESMRYSLLAGGKRVRPALCL----AACELVGGNESMAMPAA 145
++N L + V P I + + AGGKR+RP L A EL G E
Sbjct: 58 TLNDNLLSIVGAENPVLISAAEQI-FGAGGKRMRPGLVFLVSHATAELAGLKELTTEHRR 116
Query: 146 CA--VEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAFEHIAVS 203
A +EMIHT SLIHDD+ +D D+RRGK T H +FG VAVLAGD + A A ++A
Sbjct: 117 LAEIIEMIHTASLIHDDV--LDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLA-- 172
Query: 204 TLNVPPARVVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVDLEKLEFIHVHKTAKXXXX 263
N+ V++ I ++ K + + + C L E L+ +KTA
Sbjct: 173 --NLENLEVIKLISQVIKDFASGEIKQASSLFDCDTKLDEYLLKSF-----YKTASLVAA 225
Query: 264 XXXXXXXXXXXTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 323
+ E++ ++ +++GL FQ+VDDILD T+S+++LGK AG DL +T
Sbjct: 226 STKGAAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLT 285
Query: 324 YPKLLGIEK 332
P + +E+
Sbjct: 286 APVIFALER 294
>AT1G17050.1 | Symbols: SPS2 | SPS2 (Solanesyl diphosphate synthase
2); trans-octaprenyltranstransferase |
chr1:5829289-5831215 FORWARD
Length = 417
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 113/221 (51%), Gaps = 17/221 (7%)
Query: 117 AGGKRVRPALCL----AACELVGGNESMAMPAACA--VEMIHTMSLIHDDLPCMDNDDLR 170
AGGKR+RP L A EL G E +EMIHT SLIHDD+ +D D+R
Sbjct: 134 AGGKRMRPGLVFLVSRATAELAGLKELTVEHRRLGEIIEMIHTASLIHDDV--LDESDMR 191
Query: 171 RGKPTNHIVFGENVAVLAGDALLAFAFEHIAVSTLNVPPARVVRAIGELAKAIGAEGLVA 230
RG+ T H +FG VAVLAGD + A A ++A N+ V++ I ++ K +
Sbjct: 192 RGRETVHELFGTRVAVLAGDFMFAQASWYLA----NLENLEVIKLISQVIK-----DFAS 242
Query: 231 GQVVDICSEGLSEVDLEKLEFIHVHKTAKXXXXXXXXXXXXXXXTDEEVEKLRKYARDIG 290
G++ S +V L+ +KTA + E++ ++ +++G
Sbjct: 243 GEIKQASSLFDCDVKLDDYMLKSYYKTASLVAASTKGAAIFSKVESKVAEQMYQFGKNLG 302
Query: 291 LLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIE 331
L FQVVDDILD T+S+++LGK A DL +T P + +E
Sbjct: 303 LSFQVVDDILDFTQSTEQLGKPAANDLAKGNITAPVIFALE 343
>AT2G34630.2 | Symbols: GPPS, GPS1 | geranyl diphosphate synthase,
putative / GPPS, putative / dimethylallyltransferase,
putative / prenyl transferase, putative |
chr2:14578689-14581632 FORWARD
Length = 422
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 93/190 (48%), Gaps = 14/190 (7%)
Query: 149 EMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAFEHIAVSTLNVP 208
EMIH SL+HDD+ +D+ D RRG + ++V G ++VLAGD LL+ A +A
Sbjct: 171 EMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALA------- 221
Query: 209 PARVVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVDLEKLEFIHVHKTAKXXXXXXXXX 268
+ + LA A+ E LV G+ ++I S ++ +KTA
Sbjct: 222 ALKNTEVVALLATAV--EHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAV 279
Query: 269 XXXXXXTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLL 328
T E +Y R++GL FQ++DDILD T +S LGK + D+ +T P L
Sbjct: 280 AVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILF 339
Query: 329 GIEKSREFAQ 338
+E EF Q
Sbjct: 340 AME---EFPQ 346
>AT2G34630.1 | Symbols: GPPS, GPS1 | geranyl diphosphate synthase,
putative / GPPS, putative / dimethylallyltransferase,
putative / prenyl transferase, putative |
chr2:14579726-14581632 FORWARD
Length = 321
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 149 EMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAFEHIAVSTLNVP 208
EMIH SL+HDD+ +D+ D RRG + ++V G ++VLAGD LL+ A +A
Sbjct: 70 EMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALA------- 120
Query: 209 PARVVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVDLEKLEFIHVHKTAKXXXXXXXXX 268
+ + LA A+ E LV G+ ++I S ++ +KTA
Sbjct: 121 ALKNTEVVALLATAV--EHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAV 178
Query: 269 XXXXXXTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLL 328
T E +Y R++GL FQ++DDILD T +S LGK + D+ +T P L
Sbjct: 179 AVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILF 238
Query: 329 GIE---KSREFAQKLNKE 343
+E + RE ++ K+
Sbjct: 239 AMEEFPQLREVVDQVEKD 256
>AT3G29420.1 | Symbols: | geranylgeranyl pyrophosphate
synthase-related / GGPP synthetase-related /
farnesyltranstransferase-related |
chr3:11307007-11308078 FORWARD
Length = 52
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 327 LLGIEKSREFAQKLNKEAQEQLAGFDHEKAAPLIALANYIAYRQN 371
L+G+E+ +EFA+KLNKE +QL GFD AAPL+A+A+YIA R N
Sbjct: 8 LIGLERWKEFAEKLNKEVDKQLLGFDPNNAAPLVAVASYIAGRHN 52