Jatropha Genome Database
- JcCB0237221.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0237221.10 + phase: 0
(200 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G32280.1 | Symbols: IAA29 | IAA29 (INDOLE-3-ACETIC ACID INDUC... 117 5e-27
AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID ... 94 4e-20
AT2G22670.3 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 94 5e-20
AT2G22670.1 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 94 5e-20
AT2G22670.2 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 94 5e-20
AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATE... 89 2e-18
AT4G28640.1 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID INDUC... 87 9e-18
AT4G28640.2 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID INDUC... 86 1e-17
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-11 (AUXIN INDUCI... 85 3e-17
AT1G04240.1 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2); tr... 85 3e-17
AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN RESISTANT 3); t... 84 6e-17
AT3G17600.1 | Symbols: IAA31 | IAA31 (INDOLE-3-ACETIC ACID INDUC... 84 8e-17
AT3G04730.1 | Symbols: IAA16 | IAA16; transcription factor | chr... 83 9e-17
AT3G15540.1 | Symbols: IAA19, MSG2 | IAA19 (INDOLE-3-ACETIC ACID... 83 1e-16
AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOLE-3-ACETIC ACID... 82 2e-16
AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | IAA5 (INDOLE-3... 82 2e-16
AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7... 81 3e-16
AT2G33310.3 | Symbols: IAA13 | IAA13; transcription factor | chr... 81 3e-16
AT2G33310.2 | Symbols: IAA13 | IAA13; transcription factor | chr... 81 3e-16
AT2G33310.1 | Symbols: IAA13 | IAA13; transcription factor | chr... 81 3e-16
AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIB... 81 5e-16
AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIB... 81 5e-16
AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATE... 80 1e-15
AT1G52830.1 | Symbols: IAA6, SHY1 | IAA6 (INDOLE-3-ACETIC ACID 6... 80 1e-15
AT1G04550.2 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN... 79 1e-15
AT1G51950.1 | Symbols: IAA18 | IAA18 (INDOLE-3-ACETIC ACID INDUC... 79 2e-15
AT3G23030.1 | Symbols: IAA2 | IAA2 (INDOLE-3-ACETIC ACID INDUCIB... 79 2e-15
AT1G04100.1 | Symbols: IAA10 | IAA10; transcription factor | chr... 76 1e-14
AT3G62100.1 | Symbols: IAA30 | IAA30 (INDOLE-3-ACETIC ACID INDUC... 74 8e-14
AT1G80390.1 | Symbols: IAA15 | IAA15 (INDOLE-3-ACETIC ACID INDUC... 74 9e-14
AT2G46990.1 | Symbols: IAA20 | IAA20 (INDOLE-3-ACETIC ACID INDUC... 73 1e-13
AT4G14560.1 | Symbols: IAA1, AXR5 | IAA1 (INDOLE-3-ACETIC ACID I... 70 1e-12
AT3G23050.2 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7... 68 3e-12
AT1G15050.1 | Symbols: IAA34 | IAA34 (INDOLE-3-ACETIC ACID INDUC... 57 8e-09
AT2G01200.2 | Symbols: IAA32 | IAA32 (INDOLE-3-ACETIC ACID INDUC... 54 9e-08
AT3G61830.1 | Symbols: ARF18 | ARF18 (AUXIN RESPONSE FACTOR 18);... 50 1e-06
AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 49 1e-06
AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 49 2e-06
AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 49 2e-06
AT1G34390.1 | Symbols: ARF22 | ARF22 (AUXIN RESPONSE FACTOR 22);... 49 2e-06
AT1G34170.3 | Symbols: | transcription factor | chr1:12443578-1... 48 3e-06
AT1G35240.1 | Symbols: ARF20 | ARF20 (AUXIN RESPONSE FACTOR 20);... 47 7e-06
>AT4G32280.1 | Symbols: IAA29 | IAA29 (INDOLE-3-ACETIC ACID
INDUCIBLE 29); transcription factor |
chr4:15583479-15584628 FORWARD
Length = 251
Score = 117 bits (292), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 124/245 (50%), Gaps = 51/245 (20%)
Query: 1 MELHLGLSLSTQNPIDA---------CSLEI------SKKRCFEDAFVKLKDASKSEALP 45
MEL LGLSLS C++E ++K FE F L + ++ +P
Sbjct: 1 MELDLGLSLSPHKSSKLGFNFDLNKHCAIEGAASCLGTEKLRFEATF-GLGNVEENCYMP 59
Query: 46 ---LLLWSGHPNDEDDENNRANKRISCRLNNKGEDDDHVVGWPPIKSWRKK--------- 93
L +G PN+ED++ + I + + E++ VVGWPP+K+ K
Sbjct: 60 KQRLFALNGQPNEEDEDPLESESSI---VYDDEEENSEVVGWPPVKTCMIKYGSYHHRHI 116
Query: 94 -----ALHHQQSGRI------LKNRVAGGGGGKENNS------IYVKVKMEGVAIARKVD 136
+H + RI + N G ++S +YVKVKM+GVAIARKVD
Sbjct: 117 RNHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKMDGVAIARKVD 176
Query: 137 LRLFHSYQTLTNSLISQLAEK---DSTPNNYTLTYLDKDGDWLLAADVPWQTFTESVQRL 193
++LF+SY++LTNSLI+ E D NYT T+ K+GDWLL DV W+ F ESV R+
Sbjct: 177 IKLFNSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDWLLRGDVTWKIFAESVHRI 236
Query: 194 ELLRN 198
++R+
Sbjct: 237 SIIRD 241
>AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID
INDUCIBLE 14); protein binding / transcription factor/
transcription repressor | chr4:8348521-8349923 REVERSE
Length = 228
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 37/218 (16%)
Query: 2 ELHLGLSLSTQNPIDACSLEISKKRCFEDAFVKLKDASKSEALPLLLWSGHPNDEDDENN 61
EL LGL T+ + KR F S++ L L L S D N
Sbjct: 7 ELCLGLPGGTETVESPAKSGVGNKRGF----------SETVDLKLNLQSNKQGHVDLNTN 56
Query: 62 RANK-RISCRLNNKGEDDDHVVGWPPIKSWRKKALHHQQSGRILKNRVAGGGGGKENNSI 120
A K + + +K VVGWPP++++RK + +Q+SG + +GGG
Sbjct: 57 GAPKEKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGG-----TVA 111
Query: 121 YVKVKMEGVAIARKVDLRLFHSYQTLTNSLISQLAEKDS--------------------- 159
+VKV M+G RKVDL+++ SY+ L+++L +
Sbjct: 112 FVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLL 171
Query: 160 TPNNYTLTYLDKDGDWLLAADVPWQTFTESVQRLELLR 197
+ Y +Y DKDGDW+L DVPW F ES +RL +++
Sbjct: 172 NSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMK 209
>AT2G22670.3 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 321
Score = 94.0 bits (232), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 28/150 (18%)
Query: 71 LNNKGEDDDHVVGWPPIKSWRKKALHHQQSGRILKNRVAGGGGGKENNSIYVKVKMEGVA 130
LNN VVGWPPI+S+RK + S + V G G ++VKV M+G
Sbjct: 156 LNNAPAAKAQVVGWPPIRSYRKNTMASSTSKNT--DEVDGKPG---LGVLFVKVSMDGAP 210
Query: 131 IARKVDLRLFHSYQTLTNSL----------------------ISQLAEKDST-PNNYTLT 167
RKVDLR + SYQ L+++L +S++ KD + + LT
Sbjct: 211 YLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLT 270
Query: 168 YLDKDGDWLLAADVPWQTFTESVQRLELLR 197
Y DKDGDW+L DVPW+ FTE+ Q+L++++
Sbjct: 271 YEDKDGDWMLVGDVPWEIFTETCQKLKIMK 300
>AT2G22670.1 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 321
Score = 94.0 bits (232), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 28/150 (18%)
Query: 71 LNNKGEDDDHVVGWPPIKSWRKKALHHQQSGRILKNRVAGGGGGKENNSIYVKVKMEGVA 130
LNN VVGWPPI+S+RK + S + V G G ++VKV M+G
Sbjct: 156 LNNAPAAKAQVVGWPPIRSYRKNTMASSTSKNT--DEVDGKPG---LGVLFVKVSMDGAP 210
Query: 131 IARKVDLRLFHSYQTLTNSL----------------------ISQLAEKDST-PNNYTLT 167
RKVDLR + SYQ L+++L +S++ KD + + LT
Sbjct: 211 YLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLT 270
Query: 168 YLDKDGDWLLAADVPWQTFTESVQRLELLR 197
Y DKDGDW+L DVPW+ FTE+ Q+L++++
Sbjct: 271 YEDKDGDWMLVGDVPWEIFTETCQKLKIMK 300
>AT2G22670.2 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 319
Score = 94.0 bits (232), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 28/150 (18%)
Query: 71 LNNKGEDDDHVVGWPPIKSWRKKALHHQQSGRILKNRVAGGGGGKENNSIYVKVKMEGVA 130
LNN VVGWPPI+S+RK + S + V G G ++VKV M+G
Sbjct: 156 LNNAPAAKAQVVGWPPIRSYRKNTMASSTSKNT--DEVDGKPG---LGVLFVKVSMDGAP 210
Query: 131 IARKVDLRLFHSYQTLTNSL----------------------ISQLAEKDST-PNNYTLT 167
RKVDLR + SYQ L+++L +S++ KD + + LT
Sbjct: 211 YLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLT 270
Query: 168 YLDKDGDWLLAADVPWQTFTESVQRLELLR 197
Y DKDGDW+L DVPW+ FTE+ Q+L++++
Sbjct: 271 YEDKDGDWMLVGDVPWEIFTETCQKLKIMK 300
>AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATED
PROTEIN 2); transcription factor |
chr4:14323665-14325213 REVERSE
Length = 305
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 26/145 (17%)
Query: 80 HVVGWPPIKSWRKKALHHQQS---GRILKNRVAGGGGGKENNSIYVKVKMEGVAIARKVD 136
VVGWPPI+S+RK ++ QS G + A G E +YVKV MEG RK+D
Sbjct: 143 QVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKID 202
Query: 137 LRLFHSYQTLTNSL--------ISQLAEKDST---------------PNNYTLTYLDKDG 173
L+ + SY L+++L I Q + Y +TY DKD
Sbjct: 203 LKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDS 262
Query: 174 DWLLAADVPWQTFTESVQRLELLRN 198
DW+L DVPW+ F S ++L ++++
Sbjct: 263 DWMLVGDVPWEMFICSCKKLRIMKS 287
>AT4G28640.1 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID
INDUCIBLE 11); transcription factor |
chr4:14142288-14143755 FORWARD
Length = 246
Score = 86.7 bits (213), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 35/151 (23%)
Query: 80 HVVGWPPIKSWRKKALHHQQ------------SGRILKNRVAGGGGGKENNSIYVKVKME 127
VVGWPPI+++R ++ +Q S + KNR K NS++VKV M+
Sbjct: 88 QVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNR---SDSTKMRNSMFVKVTMD 144
Query: 128 GVAIARKVDLRLFHSYQTLTNSLI---------SQLAEKDS---TP--------NNYTLT 167
G+ I RK+DL Y++L+N+L S+ E D TP + LT
Sbjct: 145 GIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLT 204
Query: 168 YLDKDGDWLLAADVPWQTFTESVQRLELLRN 198
Y DK+GDW+L DVPW F SV+RL +++
Sbjct: 205 YEDKEGDWMLVGDVPWGMFIGSVRRLRIMKT 235
>AT4G28640.2 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID
INDUCIBLE 11); transcription factor |
chr4:14142288-14143928 FORWARD
Length = 302
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 35/151 (23%)
Query: 80 HVVGWPPIKSWRKKALHHQQ------------SGRILKNRVAGGGGGKENNSIYVKVKME 127
VVGWPPI+++R ++ +Q S + KNR K NS++VKV M+
Sbjct: 88 QVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNR---SDSTKMRNSMFVKVTMD 144
Query: 128 GVAIARKVDLRLFHSYQTLTNSLI---------SQLAEKDS---TP--------NNYTLT 167
G+ I RK+DL Y++L+N+L S+ E D TP + LT
Sbjct: 145 GIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLT 204
Query: 168 YLDKDGDWLLAADVPWQTFTESVQRLELLRN 198
Y DK+GDW+L DVPW F SV+RL +++
Sbjct: 205 YEDKEGDWMLVGDVPWGMFIGSVRRLRIMKT 235
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-11 (AUXIN INDUCIBLE
2-11); DNA binding / transcription factor |
chr5:17550465-17551206 FORWARD
Length = 186
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 21/127 (16%)
Query: 80 HVVGWPPIKSWRKKALHHQQSGRILKNRVAGGGGGKENNSIYVKVKMEGVAIARKVDLRL 139
+VGWPP++S+RK + ++S E YVKV M+G RK+DL +
Sbjct: 62 QIVGWPPVRSYRKNNVQTKKSE-------------SEGQGNYVKVSMDGAPYLRKIDLTM 108
Query: 140 FHSYQTLTNSL-------ISQLAEKDSTP-NNYTLTYLDKDGDWLLAADVPWQTFTESVQ 191
+ Y L SL + + E++ +++ TY DKDGDW+L DVPW+ F S +
Sbjct: 109 YKQYPELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCK 168
Query: 192 RLELLRN 198
RL +++
Sbjct: 169 RLRIMKG 175
>AT1G04240.1 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2);
transcription factor | chr1:1128564-1129319 REVERSE
Length = 189
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 19/126 (15%)
Query: 80 HVVGWPPIKSWRKKALHHQQSGRILKNRVAGGGGGKENNSIYVKVKMEGVAIARKVDLRL 139
+VGWPP++S+RK + + KN G G IYVKV M+G RK+DL
Sbjct: 64 QIVGWPPVRSYRKNNIQSK------KNESEHEGQG-----IYVKVSMDGAPYLRKIDLSC 112
Query: 140 FHSYQTLTNSL-------ISQLAEKDSTP-NNYTLTYLDKDGDWLLAADVPWQTFTESVQ 191
+ Y L +L + + E+D +++ TY DKDGDW+L DVPW+ F + +
Sbjct: 113 YKGYSELLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCK 172
Query: 192 RLELLR 197
RL +++
Sbjct: 173 RLRIMK 178
>AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN RESISTANT 3);
transcription factor | chr1:1136382-1138340 FORWARD
Length = 229
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 33/140 (23%)
Query: 80 HVVGWPPIKSWRKKALHHQQSGRILKNRVAGGGGGKENNSIYVKVKMEGVAIARKVDLRL 139
VVGWPP++S+RK + Q GG E + +VKV M+G RK+DLR+
Sbjct: 82 QVVGWPPVRSYRKNVMVSCQKS----------SGGPEA-AAFVKVSMDGAPYLRKIDLRM 130
Query: 140 FHSYQTLTNSLISQLAEKDSTPN----------------------NYTLTYLDKDGDWLL 177
+ SY L+N+L + + + +Y +Y DKDGDW+L
Sbjct: 131 YKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYEDKDGDWML 190
Query: 178 AADVPWQTFTESVQRLELLR 197
DVPW F ++ +RL L++
Sbjct: 191 VGDVPWPMFVDTCKRLRLMK 210
>AT3G17600.1 | Symbols: IAA31 | IAA31 (INDOLE-3-ACETIC ACID
INDUCIBLE 31); transcription factor |
chr3:6020281-6021040 REVERSE
Length = 158
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 69/122 (56%), Gaps = 17/122 (13%)
Query: 84 WPPIKSWRKKALHHQQSGRILKNRVAGGGGGKENNSIYVKVKMEGVAIARKVDLRLFHSY 143
WPPIKS + L GR L R ++ S++VKV MEGV I RK+DL +F Y
Sbjct: 48 WPPIKSRLRDTL----KGRRLLRR-------GDDTSLFVKVYMEGVPIGRKLDLCVFSGY 96
Query: 144 QTLTNSLISQLAEKDSTPNN-----YTLTYLDKDGDWLLAADVPWQTFTESVQRLELLRN 198
++L +L S + + N + LTY DKDGDW++ D+PW F E+V+RL++ R
Sbjct: 97 ESLLENL-SHMFDTSIICGNRDRKHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITRP 155
Query: 199 GR 200
R
Sbjct: 156 ER 157
>AT3G04730.1 | Symbols: IAA16 | IAA16; transcription factor |
chr3:1288993-1290415 REVERSE
Length = 236
Score = 83.2 bits (204), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 48/157 (30%)
Query: 80 HVVGWPPIKSWRKKALHHQQSGRILKNRVAGGGGGKENNS------------------IY 121
VVGWPP++S+RK + Q+ G E N Y
Sbjct: 70 QVVGWPPVRSFRKNVMSGQKPTT---------GDATEGNDKTSGSSGATSSASACATVAY 120
Query: 122 VKVKMEGVAIARKVDLRLFHSYQTLTNSL---ISQLAEKDSTP----------------- 161
VKV M+G RK+DL+L+ +YQ L+N+L S + P
Sbjct: 121 VKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLLN 180
Query: 162 -NNYTLTYLDKDGDWLLAADVPWQTFTESVQRLELLR 197
++Y TY DKDGDW+L DVPW+ F +S +R+ +++
Sbjct: 181 GSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMK 217
>AT3G15540.1 | Symbols: IAA19, MSG2 | IAA19 (INDOLE-3-ACETIC ACID
INDUCIBLE 19); transcription factor |
chr3:5264100-5265378 FORWARD
Length = 197
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 66/135 (48%), Gaps = 20/135 (14%)
Query: 70 RLNNKGEDDDHVVGWPPIKSWRKKALHHQQSGRILKNRVAGGGGGKENNSIYVKVKMEGV 129
++N+ VVGWPP+ S+RKK + S +V G YVKV M+GV
Sbjct: 60 KVNDSPAAKSQVVGWPPVCSYRKKNSCKEAS----TTKVGLG---------YVKVSMDGV 106
Query: 130 AIARKVDLRLFHSYQTLTNSLIS-------QLAEKDSTPNNYTLTYLDKDGDWLLAADVP 182
RK+DL Y L +L +A KD Y Y DKDGDW+LA DVP
Sbjct: 107 PYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAGDVP 166
Query: 183 WQTFTESVQRLELLR 197
W F ES +RL +++
Sbjct: 167 WGMFLESCKRLRIMK 181
>AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOLE-3-ACETIC ACID
INDUCIBLE 28); transcription factor |
chr5:9033480-9034554 FORWARD
Length = 175
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 10/157 (6%)
Query: 43 ALPLLLWSGHPNDEDDENNRANKRISCRLNNKGEDDDHVVGWPPIKSWRKKALHHQQSGR 102
A P ++ + N + + K S NN+ E VVGWPP++S R+ +
Sbjct: 12 APPCHQFTSNNNINGSKQKSSTKETSFLSNNRVEVAP-VVGWPPVRSSRRNLTAQLKEE- 69
Query: 103 ILKNRVAGGGGGKENNSIYVKVKMEGVAIARKVDLRLFHSYQTLTNSLISQLAEKDSTPN 162
E +YVK+ MEGV I RKV+L +++YQ L++++ ++KDS
Sbjct: 70 ------MKKKESDEEKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDL 123
Query: 163 N--YTLTYLDKDGDWLLAADVPWQTFTESVQRLELLR 197
N YTL Y D +GD +L DVPW+ F +V+RL +L+
Sbjct: 124 NRQYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLK 160
>AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | IAA5
(INDOLE-3-ACETIC ACID INDUCIBLE 5); transcription factor
| chr1:5365764-5366460 REVERSE
Length = 163
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 35/147 (23%)
Query: 62 RANKRISCRLNNKGEDDDHVVGWPPIKSWRKK-ALHHQQSGRILKNRVAGGGGGKENNSI 120
RA+ + L + VVGWPP+ S+R+K +L +S
Sbjct: 35 RASPEVEIDLKCEPAKKSQVVGWPPVCSYRRKNSLERTKSS------------------- 75
Query: 121 YVKVKMEGVAIARKVDLRLFHSYQTLTNSLI----------SQLAEKDSTPNNYTLTYLD 170
YVKV ++G A RK+DL ++ YQ L ++L L E + P Y D
Sbjct: 76 YVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYINFDDTLKESECVP-----IYED 130
Query: 171 KDGDWLLAADVPWQTFTESVQRLELLR 197
KDGDW+LA DVPW+ F S +RL +++
Sbjct: 131 KDGDWMLAGDVPWEMFLGSCKRLRIMK 157
>AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7);
transcription factor | chr3:8194768-8196716 FORWARD
Length = 243
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 44/152 (28%)
Query: 80 HVVGWPPIKSWRKKALHHQQSGRILKNRVAGGGGGKENNS-------------IYVKVKM 126
VVGWPP++++RK + Q++ G +E +S VKV M
Sbjct: 82 QVVGWPPVRNYRKNMMTQQKTS----------SGAEEASSEKAGNFGGGAAGAGLVKVSM 131
Query: 127 EGVAIARKVDLRLFHSYQTLTNSLISQLAEKDS---------------------TPNNYT 165
+G RKVDL+++ SYQ L+++L + + Y
Sbjct: 132 DGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNLLNSSEYV 191
Query: 166 LTYLDKDGDWLLAADVPWQTFTESVQRLELLR 197
+Y DKDGDW+L DVPW+ F ES +RL +++
Sbjct: 192 PSYEDKDGDWMLVGDVPWEMFVESCKRLRIMK 223
>AT2G33310.3 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 246
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 31/149 (20%)
Query: 80 HVVGWPPIKSWRKKALHHQQSGRILKNRVAGGG-----------GGKENNSI---YVKVK 125
VVGWPPI S R +L + Q+ + + G K N + ++KV
Sbjct: 75 QVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKVN 134
Query: 126 MEGVAIARKVDLRLFHSYQTL----------TNSLISQLAEKDSTP-------NNYTLTY 168
M+GVAI RKVDL SY+ L TN L + + P + + LTY
Sbjct: 135 MDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFVLTY 194
Query: 169 LDKDGDWLLAADVPWQTFTESVQRLELLR 197
DK+GDW+L DVPW+ F SV+RL +++
Sbjct: 195 EDKEGDWMLVGDVPWRMFINSVKRLRVMK 223
>AT2G33310.2 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 247
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 31/149 (20%)
Query: 80 HVVGWPPIKSWRKKALHHQQSGRILKNRVAGGG-----------GGKENNSI---YVKVK 125
VVGWPPI S R +L + Q+ + + G K N + ++KV
Sbjct: 76 QVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKVN 135
Query: 126 MEGVAIARKVDLRLFHSYQTL----------TNSLISQLAEKDSTP-------NNYTLTY 168
M+GVAI RKVDL SY+ L TN L + + P + + LTY
Sbjct: 136 MDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFVLTY 195
Query: 169 LDKDGDWLLAADVPWQTFTESVQRLELLR 197
DK+GDW+L DVPW+ F SV+RL +++
Sbjct: 196 EDKEGDWMLVGDVPWRMFINSVKRLRVMK 224
>AT2G33310.1 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 246
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 31/149 (20%)
Query: 80 HVVGWPPIKSWRKKALHHQQSGRILKNRVAGGG-----------GGKENNSI---YVKVK 125
VVGWPPI S R +L + Q+ + + G K N + ++KV
Sbjct: 75 QVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKVN 134
Query: 126 MEGVAIARKVDLRLFHSYQTL----------TNSLISQLAEKDSTP-------NNYTLTY 168
M+GVAI RKVDL SY+ L TN L + + P + + LTY
Sbjct: 135 MDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFVLTY 194
Query: 169 LDKDGDWLLAADVPWQTFTESVQRLELLR 197
DK+GDW+L DVPW+ F SV+RL +++
Sbjct: 195 EDKEGDWMLVGDVPWRMFINSVKRLRVMK 223
>AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE
9); transcription factor | chr5:26254463-26256134
FORWARD
Length = 338
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 29/141 (20%)
Query: 80 HVVGWPPIKSWRKKALHHQQSGRILKNRVAGGGGGKENNSIYVKVKMEGVAIARKVDLRL 139
+VGWPP++S+RK L + V G G + +++VKV M+G RKVDLR
Sbjct: 183 QIVGWPPVRSYRKNTLATTCKN---SDEVDGRPG---SGALFVKVSMDGAPYLRKVDLRS 236
Query: 140 FHSYQTLTNSL----------------------ISQLAEKDS-TPNNYTLTYLDKDGDWL 176
+ +Y L+++L +S+ KD +Y LTY DKDGDW+
Sbjct: 237 YTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWM 296
Query: 177 LAADVPWQTFTESVQRLELLR 197
L DVPW+ F + ++L++++
Sbjct: 297 LVGDVPWEMFIDVCKKLKIMK 317
>AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE
9); transcription factor | chr5:26254463-26256134
FORWARD
Length = 336
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 29/141 (20%)
Query: 80 HVVGWPPIKSWRKKALHHQQSGRILKNRVAGGGGGKENNSIYVKVKMEGVAIARKVDLRL 139
+VGWPP++S+RK L + V G G + +++VKV M+G RKVDLR
Sbjct: 183 QIVGWPPVRSYRKNTLATTCKNS---DEVDGRPG---SGALFVKVSMDGAPYLRKVDLRS 236
Query: 140 FHSYQTLTNSL----------------------ISQLAEKDS-TPNNYTLTYLDKDGDWL 176
+ +Y L+++L +S+ KD +Y LTY DKDGDW+
Sbjct: 237 YTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWM 296
Query: 177 LAADVPWQTFTESVQRLELLR 197
L DVPW+ F + ++L++++
Sbjct: 297 LVGDVPWEMFIDVCKKLKIMK 317
>AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATED
PROTEIN 1); transcription factor | chr3:5612801-5614208
REVERSE
Length = 269
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 31/148 (20%)
Query: 81 VVGWPPIKSWRKKALHHQQSGRILKNRVAGGGGGKENNS----------IYVKVKMEGVA 130
VVGWPP++S+RK L S ++ GG K ++ ++VK+ M+GV
Sbjct: 104 VVGWPPVRSFRKN-LASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVP 162
Query: 131 IARKVDLRLFHSYQTLT---NSLISQL--AEKDST---------------PNNYTLTYLD 170
I RKVDL ++SY+ L+ + L L A++D + +TLTY D
Sbjct: 163 IGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDGKGEFTLTYED 222
Query: 171 KDGDWLLAADVPWQTFTESVQRLELLRN 198
+GD +L DVPWQ F SV+RL ++++
Sbjct: 223 NEGDKMLVGDVPWQMFVSSVKRLRVIKS 250
>AT1G52830.1 | Symbols: IAA6, SHY1 | IAA6 (INDOLE-3-ACETIC ACID 6);
transcription factor | chr1:19672670-19673559 REVERSE
Length = 189
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 84/202 (41%), Gaps = 42/202 (20%)
Query: 2 ELHLGLSLSTQNPIDACSLEISKKRCFEDAFVKLKDASKSEALPLLLWSGHPNDEDDENN 61
EL LGL + I C KKR D S AL D ++EN+
Sbjct: 12 ELRLGLPGDNYSEISVCGSSKKKKRVLSDMMT-------SSAL----------DTENENS 54
Query: 62 RANKRISCRLNNKGEDDDHVVGWPPIKSWRKKALHHQQSGRILKNRVAGGGGGKENNSIY 121
+ S + VGWPP+ S+R+K + + S I Y
Sbjct: 55 VVS---SVEDESLPVVKSQAVGWPPVCSYRRKKNNEEASKAIG----------------Y 95
Query: 122 VKVKMEGVAIARKVDLRLFHSYQTLTNSL------ISQLAEKDSTPNNYTLTYLDKDGDW 175
VKV M+GV RK+DL +SY L L + K+ Y + Y DKD DW
Sbjct: 96 VKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGIGVAKEGKKCEYIIIYEDKDRDW 155
Query: 176 LLAADVPWQTFTESVQRLELLR 197
+L DVPWQ F ES +RL +++
Sbjct: 156 MLVGDVPWQMFKESCKRLRIVK 177
>AT1G04550.2 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN
12); transcription factor/ transcription repressor |
chr1:1240582-1241810 FORWARD
Length = 239
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 70/147 (47%), Gaps = 30/147 (20%)
Query: 80 HVVGWPPIKSWRKKALHHQQS------------GRILKNRVAGGGGGKENNSI----YVK 123
VVGWPPI R +L + Q+ +++KN K N + +VK
Sbjct: 69 QVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSMKVNPKVQGLGFVK 128
Query: 124 VKMEGVAIARKVDLRLFHSYQTLTNSLISQLAEKDST--------------PNNYTLTYL 169
V M+GV I RKVD+R SY+ L +L T +++ LTY
Sbjct: 129 VNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLTYE 188
Query: 170 DKDGDWLLAADVPWQTFTESVQRLELL 196
DK+GDW+L DVPW+ F SV+RL ++
Sbjct: 189 DKEGDWMLVGDVPWRMFINSVKRLRIM 215
>AT1G51950.1 | Symbols: IAA18 | IAA18 (INDOLE-3-ACETIC ACID
INDUCIBLE 18); transcription factor |
chr1:19305670-19307130 FORWARD
Length = 267
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 73/152 (48%), Gaps = 34/152 (22%)
Query: 81 VVGWPPIKSWRKKALHHQQS----------GRILKNR----VAGGGGGKENNSIYVKVKM 126
VVGWPP++S+RK S G LKN+ A K ++VK+ M
Sbjct: 97 VVGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKCDAAAKTTEPKRQGGMFVKINM 156
Query: 127 EGVAIARKVDLRLFHSYQTLTNSL----ISQLAEKDSTPNN----------------YTL 166
GV I RKVDL +SY+ L+ ++ LA + P++ YTL
Sbjct: 157 YGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPITGLLDGNGEYTL 216
Query: 167 TYLDKDGDWLLAADVPWQTFTESVQRLELLRN 198
TY D +GD +L DVPWQ F SV+RL +++
Sbjct: 217 TYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKT 248
>AT3G23030.1 | Symbols: IAA2 | IAA2 (INDOLE-3-ACETIC ACID INDUCIBLE
2); transcription factor | chr3:8181069-8181685 REVERSE
Length = 174
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 32/127 (25%)
Query: 80 HVVGWPPIKSWRKKALHHQQSGRILKNRVAGGGGGKENNSI-YVKVKMEGVAIARKVDLR 138
+VGWPP++S RK NNS+ YVKV M+G RK+DL+
Sbjct: 60 QIVGWPPVRSSRKN-----------------------NNSVSYVKVSMDGAPYLRKIDLK 96
Query: 139 LFHSYQTLTNSL-------ISQLAEKDSTPNN-YTLTYLDKDGDWLLAADVPWQTFTESV 190
+ +Y L +L I + E++ + + TY DKDGDW+L DVPW F+ S
Sbjct: 97 TYKNYPELLKALENMFKVMIGEYCEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSC 156
Query: 191 QRLELLR 197
+RL +++
Sbjct: 157 KRLRIMK 163
>AT1G04100.1 | Symbols: IAA10 | IAA10; transcription factor |
chr1:1059809-1061026 FORWARD
Length = 261
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 42/159 (26%)
Query: 82 VGWPPIKSWRKKALHHQQSGRILKNRVAGGGGGKENNSIYV------------------- 122
VGWPP++++R +L +Q + ++ G + S+ V
Sbjct: 95 VGWPPLRTYRINSLVNQAKSLATEGGLSSGIQKETTKSVVVAAKNDDACFIKSSRTSMLV 154
Query: 123 KVKMEGVAIARKVDLRLFHSYQTLTNSL------ISQLAEKDST---------------- 160
KV M+GV I RKVDL SY L +L I + +T
Sbjct: 155 KVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGYKTIKETCTSKLLD 214
Query: 161 -PNNYTLTYLDKDGDWLLAADVPWQTFTESVQRLELLRN 198
+ Y +TY DKDGDW+L DVPWQ F SV RL +++
Sbjct: 215 GSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKT 253
>AT3G62100.1 | Symbols: IAA30 | IAA30 (INDOLE-3-ACETIC ACID
INDUCIBLE 30); transcription factor |
chr3:22995835-22996593 FORWARD
Length = 172
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
Query: 119 SIYVKVKMEGVAIARKVDLRLFHSYQTLTNSL-------ISQLAEKD-STPNNYTLTYLD 170
S YVKV MEGV I RK+DL + Y L +L I E+D + ++ LTY D
Sbjct: 82 SFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEKSHVLTYAD 141
Query: 171 KDGDWLLAADVPWQTFTESVQRLELLR 197
K+GDW++ DVPW+ F SV+RL++ R
Sbjct: 142 KEGDWMMVGDVPWEMFLSSVRRLKISR 168
>AT1G80390.1 | Symbols: IAA15 | IAA15 (INDOLE-3-ACETIC ACID
INDUCIBLE 15); transcription factor |
chr1:30221780-30222702 REVERSE
Length = 179
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 64/145 (44%), Gaps = 38/145 (26%)
Query: 64 NKRISCRLNNKGEDDDHVVGWPPIKSWRKKALHHQQSGRILKNRVAGGGGGKENNSIYVK 123
N IS + N D +VGWPP+ + RK YVK
Sbjct: 59 NNYISSMVTN-----DQLVGWPPVATARKTVRRK-----------------------YVK 90
Query: 124 VKMEGVAIARKVDLRLFHSYQTLTNSL---------ISQLAEKDSTPNNYTLTYLDKDGD 174
V ++G A RKVDL ++ Y L +L I ++ E + + TY DKDGD
Sbjct: 91 VALDGAAYLRKVDLGMYDCYGQLFTALENMFQGIITICRVTELERK-GEFVATYEDKDGD 149
Query: 175 WLLAADVPWQTFTESVQRLELLRNG 199
+L DVPW F ES +R+ L++ G
Sbjct: 150 LMLVGDVPWMMFVESCKRMRLMKTG 174
>AT2G46990.1 | Symbols: IAA20 | IAA20 (INDOLE-3-ACETIC ACID
INDUCIBLE 20); transcription factor |
chr2:19307861-19308869 FORWARD
Length = 175
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 8/87 (9%)
Query: 119 SIYVKVKMEGVAIARKVDLRLFHSYQTLTNSLISQL------AEKDSTPN--NYTLTYLD 170
S YVKV MEGV I RK+DL + Y+ L +L AE++ N ++ LTY D
Sbjct: 84 SFYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYAD 143
Query: 171 KDGDWLLAADVPWQTFTESVQRLELLR 197
K+GDW++ DVPW+ F +V+RL++ R
Sbjct: 144 KEGDWMMVGDVPWEMFLSTVRRLKISR 170
>AT4G14560.1 | Symbols: IAA1, AXR5 | IAA1 (INDOLE-3-ACETIC ACID
INDUCIBLE); protein binding / transcription factor |
chr4:8361182-8361780 FORWARD
Length = 168
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 41/152 (26%)
Query: 67 ISC-RLNNKGEDDD------------HVVGWPPIKSWRKKALHHQQSGRILKNRVAGGGG 113
+SC R NNK +++D +VGWPP++S RK + S
Sbjct: 29 LSCVRSNNKRKNNDSTEESAPPPAKTQIVGWPPVRSNRKNNNNKNVS------------- 75
Query: 114 GKENNSIYVKVKMEGVAIARKVDLRLFHSYQTLTNSL-------ISQLAEKDSTPNN-YT 165
YVKV M+G RK+DL+++ +Y L +L + + +E++ + +
Sbjct: 76 -------YVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFKFTVGEYSEREGYKGSGFV 128
Query: 166 LTYLDKDGDWLLAADVPWQTFTESVQRLELLR 197
TY DKDGDW+L DVPW F+ S Q+L +++
Sbjct: 129 PTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMK 160
>AT3G23050.2 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7);
transcription factor | chr3:8194768-8196214 FORWARD
Length = 210
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 61/139 (43%), Gaps = 44/139 (31%)
Query: 80 HVVGWPPIKSWRKKALHHQQSGRILKNRVAGGGGGKENNS-------------IYVKVKM 126
VVGWPP++++RK + Q++ G +E +S VKV M
Sbjct: 82 QVVGWPPVRNYRKNMMTQQKTSS----------GAEEASSEKAGNFGGGAAGAGLVKVSM 131
Query: 127 EGVAIARKVDLRLFHSYQTLTNSLISQLAEKDS---------------------TPNNYT 165
+G RKVDL+++ SYQ L+++L + + Y
Sbjct: 132 DGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNLLNSSEYV 191
Query: 166 LTYLDKDGDWLLAADVPWQ 184
+Y DKDGDW+L DVPW+
Sbjct: 192 PSYEDKDGDWMLVGDVPWE 210
>AT1G15050.1 | Symbols: IAA34 | IAA34 (INDOLE-3-ACETIC ACID
INDUCIBLE 34); transcription factor |
chr1:5182256-5183243 REVERSE
Length = 185
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 121 YVKVKMEGVAIARKVDLRLFHSYQTLTNSLISQLAEKDST-------PNNYTLTYLDKDG 173
YVKV M+G+ + RKV + SY TL + L + + + + L Y D++G
Sbjct: 94 YVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMFGMQSVSGLRLFQMESEFCLVYRDEEG 153
Query: 174 DWLLAADVPWQTFTESVQRLELLR 197
W A DVPW F ESV+RL + R
Sbjct: 154 LWRNAGDVPWNEFIESVERLRITR 177
>AT2G01200.2 | Symbols: IAA32 | IAA32 (INDOLE-3-ACETIC ACID
INDUCIBLE 32); transcription factor | chr2:118385-119219
FORWARD
Length = 191
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 121 YVKVKMEGVAIARKVDLRLFHSYQTLTNSLISQLAEKD-------STPNNYTLTYLDKDG 173
YVKV ++G+ + RKV L +Y TL L + T + ++L Y D++G
Sbjct: 100 YVKVNLDGLVVGRKVCLVDQGAYATLALQLNDMFGMQTVSGLRLFQTESEFSLVYRDREG 159
Query: 174 DWLLAADVPWQTFTESVQRLELLR 197
W DVPW+ F ESV R+ + R
Sbjct: 160 IWRNVGDVPWKEFVESVDRMRIAR 183
>AT3G61830.1 | Symbols: ARF18 | ARF18 (AUXIN RESPONSE FACTOR 18);
transcription factor | chr3:22888171-22891179 FORWARD
Length = 602
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 123 KVKMEGVAIARKVDLRLFHSYQTLTNSL------ISQLAEKDSTPNNYTLTYLDKDGDWL 176
KV+M+G+A+ R VDL L SY L + L QL +D + + + D +GD +
Sbjct: 493 KVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARD----KWIVVFTDDEGDMM 548
Query: 177 LAADVPWQTFTESVQRL 193
LA D PW F + +++
Sbjct: 549 LAGDDPWNEFCKMAKKI 565
>AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19104993-19108029 FORWARD
Length = 601
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 122 VKVKMEGVAIARKVDLRLFHSYQTLTNSL--ISQLAEKDSTPNNYTLTYLDKDGDWLLAA 179
+KV+M+G A+ R VDL L SY L L + ++ + S + + + + D +GD +L
Sbjct: 493 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSPKDKWAIVFTDDEGDRMLVG 552
Query: 180 DVPWQTFTESVQRL 193
D PW F + ++L
Sbjct: 553 DDPWNEFCKMAKKL 566
>AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105511-19108029 FORWARD
Length = 514
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 122 VKVKMEGVAIARKVDLRLFHSYQTLTNSL--ISQLAEKDSTPNNYTLTYLDKDGDWLLAA 179
+KV+M+G A+ R VDL L SY L L + ++ + S + + + + D +GD +L
Sbjct: 406 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSPKDKWAIVFTDDEGDRMLVG 465
Query: 180 DVPWQTFTESVQRL 193
D PW F + ++L
Sbjct: 466 DDPWNEFCKMAKKL 479
>AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105112-19108029 FORWARD
Length = 622
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 122 VKVKMEGVAIARKVDLRLFHSYQTLTNSL--ISQLAEKDSTPNNYTLTYLDKDGDWLLAA 179
+KV+M+G A+ R VDL L SY L L + ++ + S + + + + D +GD +L
Sbjct: 514 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSPKDKWAIVFTDDEGDRMLVG 573
Query: 180 DVPWQTFTESVQRL 193
D PW F + ++L
Sbjct: 574 DDPWNEFCKMAKKL 587
>AT1G34390.1 | Symbols: ARF22 | ARF22 (AUXIN RESPONSE FACTOR 22);
transcription factor | chr1:12556005-12559082 FORWARD
Length = 598
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 123 KVKMEGVAIARKVDLRLFHSYQTLTNSL--ISQLAEKDSTPNNYTLTYLDKDGDWLLAAD 180
KV+M+GV I R VDL + + Y L L + L + T N + + + D D D +L D
Sbjct: 513 KVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQTRNQWEIAFTDSDDDKMLVGD 572
Query: 181 VPWQTFTESVQRLELLRNG 199
PW F V+++ + + G
Sbjct: 573 DPWPEFCNMVKKILIFKRG 591
>AT1G34170.3 | Symbols: | transcription factor |
chr1:12443578-12446764 REVERSE
Length = 546
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 123 KVKMEGVAIARKVDLRLFHSYQTLTNSLISQLAEKDS--TPNNYTLTYLDKDGDWLLAAD 180
KV M+GVAI+R VDL H Y L L KD T N + + + + +G +L D
Sbjct: 437 KVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQWEIVFTNNEGAEMLVGD 496
Query: 181 VPWQTFTESVQRL 193
PW F +R+
Sbjct: 497 DPWPEFCNMAKRI 509
>AT1G35240.1 | Symbols: ARF20 | ARF20 (AUXIN RESPONSE FACTOR 20);
transcription factor | chr1:12927457-12930523 REVERSE
Length = 590
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 123 KVKMEGVAIARKVDLRLFHSYQTLTNSL--ISQLAEKDSTPNNYTLTYLDKDGDWLLAAD 180
KV+M+GV I R VDL + + Y L L + L + T N + + + D DG +L D
Sbjct: 499 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQWKIAFTDSDGYEMLVGD 558
Query: 181 VPWQTFTESVQRL 193
PW F + V+++
Sbjct: 559 DPWPEFCKMVKKI 571